EMLSAT00000004790, EMLSAT00000004790-700637 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004790
Unique NameEMLSAT00000004790-700637
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s251supercontigLSalAtl2s251:1497748..1500362 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004790 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004790EMLSAG00000004790-687556Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020982EMLSAE00000020982-729910Lepeophtheirus salmonisexon
EMLSAE00000020983EMLSAE00000020983-729911Lepeophtheirus salmonisexon
EMLSAE00000020984EMLSAE00000020984-729912Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780794auto780794Lepeophtheirus salmonispolypeptide
EMLSAP00000004790EMLSAP00000004790Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004790

>EMLSAP00000004790 ID=EMLSAP00000004790|Name=EMLSAP00000004790|organism=Lepeophtheirus salmonis|type=polypeptide|length=183bp
MEDEIYTPRHPQEDWYEIQSIRSTGSRKGHRRPGLGHTQSLPLAPPPKPK
RWSRFKNALRLSTVWIFSNVGICILVNLYLILGALVFQQIEGDVPQIRFG
VGDYRNATVKQLWTITEKYNTLHRGNWTSEIQVIIADYQRRIIQEAFEGY
DGNDMPASQWTFEGALLYSITVITTIGLKKLNR
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mRNA from alignment at LSalAtl2s251:1497748..1500362-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004790-700637 ID=EMLSAT00000004790-700637|Name=EMLSAT00000004790|organism=Lepeophtheirus salmonis|type=mRNA|length=2615bp|location=Sequence derived from alignment at LSalAtl2s251:1497748..1500362- (Lepeophtheirus salmonis)
ATGGAAGACGAGATATACACTCCGAGACACCCTCAGGAGGATTGGTACGA
AATACAATCCATTCGTTCAACGGGTTCTCGGAAGGGCCATCGACGCCCTG
GATTAGGACACACTCAATCCCTACCCCTAGCACCTCCTCCTAAGCCCAAG
AGATGGTCCCGATTTAAAAATGCACTCAGACTCTCCACGGTCTGGATATT
TAGTAATGTCGGGATTTGTATTCTTGTGAACTTGTATCTCATACTGGGAG
CTCTTGTCTTTCAACAAATCGAAGGGGACGTGCCTCAAATTCGATTCGGT
GTGGGTGATTATCGTAACGCCACTGTGAAACAACTCTGGACTATCACTGA
AAAATACAATACTCTTCATAGGGGTAATTGGACGTCCGAAATCCAAGTGA
TTATTGCAGACTATCAAAGGAGGATCATTCAGGAGGCCTTTGAGGGCTAT
GATGGAAATGACATGCCTGCTTCGCAGTGGACTTTCGAAGGAGCGCTTTT
ATACTCGATTACTGTGATCACAACTATAGGTAAGATCTTTTGCACTTTTA
AACAAATATGACCACTAGTTTTGTGTGAGTCCTCATTCATTCGGTCCAGT
CCTTGGGGCCAGTCCTTGAGAGCAGTCCTTAAGACCTTCGGTCCTTCGGA
CTCTCAGTACTACAACTTATTAAAGAATAAGAAATAAACTTAAGTGACGT
CATCAATGACTGAACTTTATAGGCTTTAGGATTGATATGTAGGATTGAAC
TAAAGTGGACCTAGACTTAACTGGATAGGACTGAAGTTTTCAGTCCTAAA
TAAGGACCGACATAACAGGAATAAACACCTATGTAAGTAGATACATGCCC
TGAATCATTCTTACATATTTTGTACATAGTGTACGTTCGGTGAAATTGTT
AATTTCTACGAACTCCATATCTAATTTGCAAATTATACAATTTGTTTTAG
GTAGATTCCAGGGTCAAGCAATGACGTAGAAAGGTGGGAGATTTGATGCG
TGTGCAAAACTCCTATGGCACAAACGATACTACTACTAACAAAAAAAAAA
GTGGCAATTGACCTGCAATAATAACAATTATTATTCTCCATCCCCTTTCT
ATGTCCTTTGTTACGTTTTTTCTTATTTTTAAAGTGTCGTTAATTCTCAA
TTTCTTAAGTTACTTTACCTGCTTTTCCCTCCTTAAACAACTGGGAAATC
TATGTTGGCTTATATAGGAGGGAAGAGGGGCAAGTTGGTACGTGGACATA
GTTCAATTTTTAAGTGATTTAATACAAGGCTTGCTTAAGAGATTCGTGAA
ACATCCAACAATTAGTGTGCATTGGCTACAGGTTTTTGAATGCACACATT
CCTAATCTGATTTTAAAACCTTGAGTAATTTTTTTCATGTCCATTAATGT
TCTTCTTCTGAAATTCAGTTAAAAGGCTTTTTACACGTCATGTCAGAATT
CAGTCAAGCTTTATAATAATGAAAACTATTTTTTCATTTTTTCAAAAAAT
ATATATATATAACTTTGATTATAGGTTTGAAAAAAGTAATTTCGTATTTT
TCGCTTTATTTCAATGCTTTAAAGGAAGTGTTACTATCATCCAATTTAGC
ACAAGTAGGCCCCACTCTGTTCAATAACTTGTTGCCAGCGAGAATCCAGC
TTCCTAATGTCATTTTTGTAGAAGGCCTTGCCCATATTGGGAAAAAAACA
AACAAAAAAACTCGGAAAATCAGTTACATAGTTGTTCTTTTCCCACAGTT
TTTCACCTACACATTTGATGCTCAATAATTCACGACTGAAAAGGCCAAGC
GCTATACTGTCCAAAATACGTTTATAGTATACATTTGCACATGATGAAAA
TCTTGTTGTATGGATCCAATGTGACCAATAATGAACCAAATATACTTAGT
TTAAAAAGAGAGGCAGGAAATGACTTTTTTTCAACGTAATATTCAAATTT
TAATGTCTTAAAAATTTGTTATTACATCTTATTACAATGTTATTTCCATA
CTGTCGATAAAAGTTAACTGTTACAATCGAAGGAATAAGATATTTGCCTC
TAATTATCCTACTTTTCTCATCCCTAATCGATCAAAAAAAAAAAAAGAAG
AAAGTTGTACAAATTGCGTCATCCTTAGAGATTTTTAGTTTTTGATTTAA
TTTAAAATATCAGTGCTTATCATTTCCATAATATAGTATTAATTGCAGAT
ATTTTGTCCTTTTTTATTCTCAAAGCCTTTGATGAAGCTTCATACAGATT
TATTCAAAATTTGTTCATTTTATGTAGTAAATATATTAACTTTGGGGCCC
TAAGATCGCATCTCCTTACACTATGTTGTAATTTTTTAAGTCAACGAAAA
TGCTCAACAAGCAAACTCTTTTTATTTCATAGAAATATAATTATTTATGG
TTGATGTAAGAACTAAATAGAGTTAATCGATTAGGTATTCCTTGAGCCAT
TGTATAGGTATATAAAAGTAAATAAAATAAAGAGTATTTCTTTTGTGAGT
AAACAACAATATCTAAACCTTAAATGTTGAAATGGTTGTCAACCCTAAGA
GGATGACGAATAAAATGMTATGTGTAGTTTGGTGTAATTAATTTTTCTTT
TAGTTAAACCGATAA
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