EMLSAT00000004821, EMLSAT00000004821-700668 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004821
Unique NameEMLSAT00000004821-700668
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s254supercontigLSalAtl2s254:304065..306565 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004821 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004821EMLSAG00000004821-687587Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021115EMLSAE00000021115-730043Lepeophtheirus salmonisexon
EMLSAE00000021116EMLSAE00000021116-730044Lepeophtheirus salmonisexon
EMLSAE00000021117EMLSAE00000021117-730045Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776126auto776126Lepeophtheirus salmonispolypeptide
EMLSAP00000004821EMLSAP00000004821Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004821

>EMLSAP00000004821 ID=EMLSAP00000004821|Name=EMLSAP00000004821|organism=Lepeophtheirus salmonis|type=polypeptide|length=338bp
MHHQHHHHSHFSELERNRVVLNGIHRDFYERGPFGGFAAAAAAAAAALNN
SELDSSNRPSLDLNKGFGGAKEVGGGLRISPPPQPSSTSLSGANSGNLSS
HYSSNNNNNNYHISNENNNHVSNSPNNNNVDNIRRYRTAFTREQIGRLEK
EFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKRQKMTLTWPCG
DPVLAAYVLQAAAASGGLPYPPPPGLFPSSPFHHVPRPSHHPYGGSPYPL
HSTPETTTSSPFLNTSSRKQDPSESDLKSDSSPSPPPNIPSSDLYIKAEE
EDADEEEEDGSETSKKSLTTTKNSTSLFQPYLDIEDKK
back to top

mRNA from alignment at LSalAtl2s254:304065..306565-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004821-700668 ID=EMLSAT00000004821-700668|Name=EMLSAT00000004821|organism=Lepeophtheirus salmonis|type=mRNA|length=2501bp|location=Sequence derived from alignment at LSalAtl2s254:304065..306565- (Lepeophtheirus salmonis)
ATGCATCATCAGCACCATCACCATTCCCATTTCTCAGAATTAGAGAGAAA
TCGTGTAGTTTTAAATGGAATACATCGTGACTTCTATGAAAGAGGGCCCT
TTGGGGGATTTGCTGCTGCGGCGGCCGCAGCAGCAGCTGCCCTTAATAAC
TCGGAGCTGGATTCTTCTAATAGGCCCTCATTGGACTTGAACAAGGGATT
CGGAGGAGCCAAGGAAGTTGGAGGAGGTAAGGAGAAAGAAATAAATCTTT
ATTGTTGTGGTCTTTCATGTTTTGTTTTTTTTTTAATTTTTGACTTGTGC
AATTTCCCGAATAATAATTCAATATAACAAATTAGTCATTTATTACTACA
ATAAGGATAAATATCCATTTGGCAGTCATCATTTTATGTATGTCGTACGT
ACAAGTTGCAACAGACAATAAGGAGATAAACATTTACTTTAAATGATGAA
TTCACAGCACTTGGGGAAAAAATTAATACACTAGTTAATATATTAACGTT
ACTTATTAATATTAGGCATACTTCATGAATTATTACTTTTCAATAATAAA
AAAAGTCACATTACATCCTAAATATATTGTCTTGATCAAAACTGATGCTA
GTTCTTCATCTCATTTTTAATTGTTGCAACTTGTATACTTTGCTTATACA
AGTTACAACTTGGGCACAGTATGCATTATAGAGTTCAAATACCCATCGTT
ATTTTAATTATATATACCTAATCAATAAATAATTTTCATCTATTAAAATG
AAATGATAAAATCTATTAATATGACCTATTTTTTGATCAGTCACAATTGA
AAAGGCTCCCAAAAAGAAGTGGTGTATATTTTTGGTATACTGAAAAAAGA
GGGTTTTTTCCTCTCTCCTAAGTCCAACTAGGAGAATATTTGGTTGTCTT
AATCCAAAATTAATCTTCAGTTTATTTTGACTTATGTTGTAATTTGAATA
AAGCATAATGTGGCGTAGAAATTCATACATTTCTACAATCTGTTAATTCG
AGTTTCAATTTGAACACAATAAAATATTAAATAGAGGCCATCCTTCCCTA
TAATAGTAAAAAGGAGGAGGATGGTGAAGGAACAGGCTCTCTATGGGACT
TTCTACGCGTCCTTTCCTTTCTCATTCATTTTGAAGGTATATTTAATTTT
ACTATGGCGAGACGAATAGGTGTTGATCCACTTTTATCTAATTAATAGTT
GTAGTAAATCTATTAATCTATTTCCCGTATCTATTAGTTAATTTTTGATA
ATATTGCGTTCATTGAAAATAAAGGTTTAATTCATGACTAATCTTTGGTT
CTTCTTAAAATCTTTCTCTCTAGGACTGAGAATCTCTCCTCCGCCGCAGC
CTTCATCAACTTCTCTCAGCGGCGCTAATAGCGGAAATTTATCATCGCAT
TACTCTTCAAATAATAATAATAATAATTATCACATTAGCAACGAAAATAA
TAATCACGTTTCCAATTCGCCAAATAATAATAATGTGGACAATATTCGCC
GATATCGTACGGCATTTACTCGTGAACAAATTGGACGACTCGAAAAGGAG
TTCCTCAAAGAAAATTACATTTCTCGACCAAAACGATGCGAACTTGCAGC
AGAGCTTAATTTACCCGAAAACACGATTAAAGTATGTAATTATAAACATT
GGCGTAGGAGATGATTTTTTAAACAAATTTTGCCAAATATTGAAGATTAA
CATTTTATTTATAAAATATTTTTTTAATGATTTTTTAAGGAAATAAATTT
CTTTGATAATGTTATTTTTAGAAAATACATTTTTTATAGATAAAACATTT
TTGGTGACTTCTTTTTTCTAGAATGATTTTCAATTATTGCCCGAATATTG
CGCAGGTTTCTCTAAATGAGGGGGGGGGGGCAATTGTCCGATTATTGATA
GTATTTTCTCATTTGCAATTGCTTTCATGTCTTCTATGCCAAAAAAATGA
TCTTAAATCGATACTGACATATATTTGTAGTCGTCTTAGACATTAAATCA
TGTTTTTTCTCCTTCCAGGTCTGGTTTCAAAATCGCCGCATGAAGGACAA
ACGTCAAAAAATGACTCTAACATGGCCTTGTGGTGATCCCGTACTTGCAG
CATATGTACTTCAAGCAGCTGCAGCCTCTGGAGGACTTCCCTATCCACCT
CCTCCCGGTCTCTTCCCTTCGTCACCTTTTCATCATGTACCACGTCCATC
TCATCACCCCTATGGGGGATCTCCTTATCCTCTACATTCGACTCCTGAGA
CGACGACCTCATCACCTTTTCTAAATACATCCTCACGAAAGCAAGATCCC
TCTGAATCGGATCTCAAAAGTGATTCGTCCCCCTCTCCTCCTCCGAATAT
ACCTTCATCGGACCTTTATATCAAGGCAGAGGAGGAGGATGCTGATGAAG
AAGAGGAGGACGGATCTGAGACCTCCAAAAAATCCCTTACGACGACAAAA
AACTCTACTTCCTTATTTCAGCCCTATTTGGACATTGAGGATAAAAAATG
A
back to top
Add to Basket