EMLSAT00000004846, EMLSAT00000004846-700693 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004846
Unique NameEMLSAT00000004846-700693
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s256supercontigLSalAtl2s256:12798..13521 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004846 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004846EMLSAG00000004846-687612Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021211EMLSAE00000021211-730139Lepeophtheirus salmonisexon
EMLSAE00000021212EMLSAE00000021212-730140Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769054auto769054Lepeophtheirus salmonispolypeptide
EMLSAP00000004846EMLSAP00000004846Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004846

>EMLSAP00000004846 ID=EMLSAP00000004846|Name=EMLSAP00000004846|organism=Lepeophtheirus salmonis|type=polypeptide|length=222bp
MVIHWGNPLMKLSVIVPIEGCNCSRTYSGSYYDWLSGKSHYNQIITLYRE
TTCSETAWRRGNGQQVMAYSFYINPGAISTERSLHYIQGIEANIISLKQY
FPGWIMRLYYDLDKTKPSFKSICNLVCRNDHVDLCNVKNLPGGLSRNVSS
MLGMVWRFLPTLDPQVDLMGSRDLDSLFSEREVAAXHEWMHSDKILHAMR
DHPQHGTEILGMCYLISYNLAI
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mRNA from alignment at LSalAtl2s256:12798..13521-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004846-700693 ID=EMLSAT00000004846-700693|Name=EMLSAT00000004846|organism=Lepeophtheirus salmonis|type=mRNA|length=724bp|location=Sequence derived from alignment at LSalAtl2s256:12798..13521- (Lepeophtheirus salmonis)
ATGGTGATCCATTGGGGGAATCCTCTTATGAAACTGAGTGTAATTGTGCC
AATTGAGGGCTGCAATTGTAGTAGAACATATTCTGGTAGTTATTATGATT
GGCTGAGCGGAAAATCTCATTATAATCAAATTATAACATTATACCGAGAA
ACAACATGTTCAGAGACAGCATGGAGAAGAGGTAATGGGCAGCAAGTAAT
GGCTTATTCTTTCTATATAAATCCAGGAGCTATAAGTACTGAAAGATCTC
TTCATTATATTCAGGGAATAGAGGGTAAGGTTTTTTATATTGTATTTTAT
CTCATATATTTACATGCACACATTTTTAGCCAATATTATATCTCTTAAGC
AATACTTTCCTGGATGGATCATGCGTCTTTACTATGATCTTGATAAAACC
AAACCCTCTTTCAAAAGTATTTGTAATCTTGTATGTAGAAATGATCACGT
TGATCTATGTAATGTAAAAAATCTTCCTGGAGGTCTTTCAAGAAATGTCT
CTTCCATGCTTGGCATGGTATGGAGATTTCTTCCCACTCTTGATCCACAA
GTGGACTTAATGGGAAGTAGGGATCTAGATAGTCTTTTCTCCGAGAGAGA
AGTGGCTGCAGKACACGAATGGATGCACTCTGATAAAATCCTTCACGCCA
TGAGAGATCATCCTCAACATGGTACTGAAATTTTGGGTATGTGTTATCTC
ATAAGTTATAATTTAGCAATTTAA
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