EMLSAT00000004864, EMLSAT00000004864-700711 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004864
Unique NameEMLSAT00000004864-700711
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s256supercontigLSalAtl2s256:496860..497825 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004864 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004864EMLSAG00000004864-687630Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021286EMLSAE00000021286-730214Lepeophtheirus salmonisexon
EMLSAE00000021287EMLSAE00000021287-730215Lepeophtheirus salmonisexon
EMLSAE00000021288EMLSAE00000021288-730216Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778174auto778174Lepeophtheirus salmonispolypeptide
EMLSAP00000004864EMLSAP00000004864Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004864

>EMLSAP00000004864 ID=EMLSAP00000004864|Name=EMLSAP00000004864|organism=Lepeophtheirus salmonis|type=polypeptide|length=265bp
MSLNPLVLLLFGVLTLGCSALEVTSAGSAGKNHSWVVEDXIILQFNSSVF
TLKPTVNTSLTVDIPSNALVVQEYSNCGNQTQVIALSWKWTNVNGTSLNH
NITVEFHRNNDTKSYGIGEIYGVFNVGKWNETKKVGNETQNVTVTSYITM
SSEQHSNILPTPLNRSYVCLDPGNVTLVSHYKVSTSSRFFTLKNTTLAVL
GIKFDAFRHPNGTHGKFQSPYNCIENRVNDVVPIIVGCVLAFLIVFVLVA
YVIGRRTPRSGYLSV
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mRNA from alignment at LSalAtl2s256:496860..497825-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004864-700711 ID=EMLSAT00000004864-700711|Name=EMLSAT00000004864|organism=Lepeophtheirus salmonis|type=mRNA|length=966bp|location=Sequence derived from alignment at LSalAtl2s256:496860..497825- (Lepeophtheirus salmonis)
ATGTCGTTGAATCCTTTGGTTCTTTTACTTTTCGGAGTCCTTACTTTGGG
ATGTTCTGCGCTTGAGGTGACATCGGCTGGATCAGCGGGAAAGAATCATT
CATGGGTTGTAGAAGACTGRATCATCCTCCAATTCAATTCTTCTGTCTTT
ACTCTTAAGCCAACAGTGAACACGAGTCTCACTGTAGATATCCCAAGCAA
TGCCTTAGTCGTCCAGGAGTATTCCAACTGCGGAAATCAAACACAAGTCA
TTGCTCTCTCGTGGAAATGGACGAACGTGAATGGAACTTCCCTTAATCAT
AACATCACTGTGGAGTTTCATCGCAATAACGACACGTAATACTACATTTT
CATTTTACCTTTTACATGTTTTTGATATCAATTTTCCTTTCTTACAGGAA
GTCTTATGGCATAGGAGAGATCTATGGAGTGTTCAACGTTGGGAAATGGA
ATGAGACAAAAAAAGTCGGGAACGAGACTCAGAATGTCACTGTCACATCA
TATATCACCATGTCCTCAGAGCAACACTCCAATATATTACCAACGCCCCT
GAATAGGAGCTACGTGTGCTTGGATCCCGGAAACGTTACTTTGGTATCCC
ACTATAAAGTCAGTACATCTTCGAGGTTCTTTACATTGAAAAATACCACT
TTGGCTGTTYTGGGAATTAAATTTGATGCCTTTAGACATCCAAACGGGAC
GCACGGAAAGTTTCAGGTAATTAATTATATACTAGATTGATGTGTACATT
ACTTATGATGGTCCTACATATATGTATCATTTCATGTTGCTCATATATCC
TCTCTGTCTCTCTTCTTTTTAGAGTCCATATAATTGTATTGAGAATCGAG
TCAATGACGTCGTGCCCATCATTGTGGGATGTGTTTTGGCATTCCTTATT
GTGTTCGTACTTGTTGCTTATGTAATTGGACGACGAACACCTCGATCAGG
ATATTTGAGTGTTTAA
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