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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s256 | supercontig | LSalAtl2s256:591908..597837 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004870 >EMLSAP00000004870 ID=EMLSAP00000004870|Name=EMLSAP00000004870|organism=Lepeophtheirus salmonis|type=polypeptide|length=351bp
MRSSILKYVSLHLFARNLGTVPSRKSIPALESDLKMMLEEIHAQLDAGAK
HAPELREMAKYYFDGKGKAIRPVIAVTLGHAINNHLNVGNVDNLVQRQRR
VAXXSEXIXTASLVHDDVXDHAEQRRGKPSINVKWDIRKSTICGDYILSV
ASNMMSKIGNDDVVITLSQILTDLVNGEFQQLQNKNSESERFQLYLNKTF
NKTASLIAYSCRGNAILAGANPELAECCYEYGRNIGVAFQLVDDLLDFVS
SSELLGKPAAADLKLGLATAPVLFASSKFRELEPMIDRRFSEPGDIEAAF
DAVLKSDGLERTRELATNHCGDAVKSIRDLKDSSFKLSLIDICDRVLNRI
K back to topmRNA from alignment at LSalAtl2s256:591908..597837+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004870-700717 ID=EMLSAT00000004870-700717|Name=EMLSAT00000004870|organism=Lepeophtheirus salmonis|type=mRNA|length=5930bp|location=Sequence derived from alignment at LSalAtl2s256:591908..597837+ (Lepeophtheirus salmonis)
CTGGAACTTATATTGGGCAAGGACTTGTTGTCCTTGATAGTGGGAAATAC
TCTATTGATTTGGTCAACTATCTCTTTTCTCTCGTCTGCTGTCGTGACGT
CAAAGAATTTCCTTTGCTATTTCTTAGTATGATCACTCTATGTTAATGTA
TTTTATATCTATGGATCTACCTCTACATAAGTCATATATTCCAGCAGCTA
GACGGGGAATAAGCTCAGTTTCCTTATTATTTTGCATGATAAGTATCATG
TTGAGATATCCCGAATTTTAGAGTAATAGCTAATAACTTAGAGGAGTAAC
TAACATTCACTTTCAAGTAAGTTTCCATTTTTCCGTTTTTATAATAAACT
TATTGAGTTCAGATTATATAAAAAAACATGGAAACCGCCATTTTAAAAAA
AGATATTACTTAGGTATATATATATATATATATCTAATTTCTTCATCTCT
CTAGTTAGGATTGGTTGTCCTTGTGTAGGGTTATTGTGATTATTTAATTA
CATCTATTTGTTAATAAATAATTAGATTGATGGAGCAGGGATTTTTTAAT
TTAAAATTTTTTTTATTAGTATTCATATATAATATTAATATCAATTTTCT
ACGAAAATTTCCTCTTCCTTGTTGTATAACAAAATATGTTCCTTAAATCA
AATGGTGTCCAAACTTTTACTTGTTATTTTGTACCTTTTTGTAATTCTTT
TTTTTTTTGTGTGTGTGTACGCATATTATATTTGTAAGTTATTTGACATG
ACTGCGTTCCCCTCATACTATAGATATAATACGCAATAATAATATATTAA
TACCAATATTGTATATAAATTTAGGCTTGGCCCTCATCATTCTAACAATC
GATTCTTTTACAATAACAACCGTTAAAAGATACGTCATTTTATTTCTAAT
TTAGTTATGAATGATACTTGAATGGGATAAATGTGGTTATTTATGTACCT
TTTATTAACAAGCGATTACTTTTTGTTAAAGTTAATCCAATACGGTTATT
CTGATTCAAGTTTAATAAAATAAAGGTAAGGCAATGAAATGGTATGAGAC
GAGGGAGGGGGGGGGGGGAAGGTTTTACTTCTGACTTAGTAAAACGGAWA
TTTGGAGTCATCCTACGGCGTGAAATAGCTAACTTATAGTAATAACATAT
TTTTAAAACATCACAGGTAGATTCTTCCTTACTTTTACTAATAAGAAATG
AAGGTCCCAGCAAGATTTCGTAAAGAGAAATTATTTTTCATTATCCCTAG
GGGTTTGTCAGAATGCGTAGTTCCATTTTGAAGTATGTGAGTCTCCATCT
TTTTGCAAGGAATCTTGGCACAGTTCCGTCCAGAAAATCGATTCCAGCAT
TGGAATCTGATTTAAAAATGATGTTAGAGGAGATTCATGCTCAATTGGAT
GCTGGTGCTAAGCATGCTCCGGAGCTCAGAGAAATGGCTAAATACTACTT
TGATGGTAAGGGGAAAGCAATTCGACCAGTTATTGCGGTGACTCTTGGAC
ATGCGATTAATAATCATCTGAATGTGGGTAATGTAGATAATCTTGTTCAA
CGTCAAAGGAGAGTGGCTGKGRTTAGTGAAAWGATTYATACCGCTTCCCT
TGTTCATGATGATGTCTTWGATCATGCTGAACAGCGGAGAGGAAAGCCAT
CCATTAATGTGAAGTGGGACATCAGGAAATCAACCATTTGCGGTGACTAC
ATTCTCTCAGTAGCTTCTAATATGATGTCCAAGATTGGTAATGACGATGT
TGTCATCACTCTCTCTCAAATTCTTACAGATTTAGTTAATGGTATGGTCA
ATTTATCATACACATGTGTCCAAATGTTTAAAAGTCACTTTTTTTATCTT
TTCTTCACACAGGCGAGTTCCAACAATTGCAGAACAAGAATTCTGAATCT
GAAAGATTTCAGTTATACCTCAATAAGACTTTTAACAAAACTGCCTCTCT
TATAGCATATAGTTGTCGGGGAAATGCAATTCTTGCAGGTGCAAATCCAG
AGTTAGCAGAATGCTGCTATGAATATGGAAGGAATATTGGAGTTGCTTTT
CAGCTTGTTGATGATCTATTAGACTTTGTTTCCTCTTCTGAATTACTAGG
GAAACCGGCTGCAGCTGATCTCAAACTTGGATTAGCGACTGCTCCAGTGC
TTTTTGCGAGTTCAAAATTTAGAGAACTAGAGCCTATGATTGATAGAAGA
TTTTCTGAACCAGGAGATATAGAGGCAGCATTTGACGCGGTTCTCAAGTC
AGATGGACTAGAGAGAACCAGAGAACTAGCAACTAACCATTGTGGAGACG
CTGTTAAATCTATTCGAGATTTAAAGGACTCCTCTTTTAAATTATCCTTG
ATTGATATTTGTGATAGAGTGCTCAATAGAATTAAATAACATTTATATTT
TAAGAATAAAATACATTTTTACAGGAAAAGAGAAATATTATGTATAATTA
AACCGCATAACTACATACAAAGTAAAATTTGACAGAAAAGTAGCAGAAAC
AGAGGAAATTAGTACTTGGGATAGCTTATATTAGGATAGCTCCGATTTTC
CATATTTGAGTTTTTTCTATAACCAGAATACTGTCCCGACGGAGGTGGTA
CAGGAGGAGGGGTTGGCCCATCCTGGTGTTTAAAATTTAAAACTATGGGT
GGTGCAGACTCGTAACTAGCACTGCCTTCATAAGGTAGTGACCTTATAAT
AGGTGGAGTTGGAACTTTGACTTCTGAGAGGGGTCTAATATGGGGTGCTG
GAGGTACAGCAGACTGTTTTCCTTTAGGATAAGGTACCACAGAGGGAATA
GTAAATGAAGGAGGCCGTTTATCAGATTTCGAACGATCAACAAATGAAGC
ATTGTAACTGTTAGTTGAGTTAGGAGGTTTATTAACTATCGAAGTATTGG
TCTGATTGGATCCAGAGTCTGAATACTCAGTAAACCTTTTATTTATAGTG
GCGTTACTGTGATTCGAAGAAACAAATTTCACATCTTTCATTCCACTACA
GTCTCTGCTATCAGTATTATATCCATCATTGGGATAACCTTCTTTACGGT
ATTTTCCATTCCCAGTGTTGTTGTTAAACGAACCCTGACTATTATTTCCG
AATGCGGGTCCTCCATTGTTATAACCATCATTAAAATTACCCGAATTATA
ACTGATAGGATTATTTTGCTCAGTATTTGAAGGTTTAGTAAAATAACCAA
CACTGCCAGTAAACTTGCTAGAATTGGCTCCTTTTTTGTTAGGATCTCTA
ATATTGTTACTATTATTAAATCTGGTAAAATTATTGCCATTACTTCCACG
AACGTATTGATAATTAGAAGTATTATCTTTATTATTGGATTTGTAGTCGG
GCTCCACAGGTGTATTAAATGTACCTCTCGTACTATTGCCTTGATTATAA
GTTCGCCGATCATTTCTTGCTCCAAAATCATTGTTATTCATGCCGAATTC
ATCGTTTCTACGATGCCCATAAAAATTATCCCGATTGTTGTTGGGTCTAC
CGTCTTGGCTTYTACTCCTTGAGCGTCGTGCAGAACCAAAATTTCTTGCA
TTAGGGGAATTTGAACGATCTCGGAATGGTTGATTTATAAAATTTGTTTC
TTTGATTATTTCAATATCAGAGTCTTCATCATTATTATGATTTGGGGAGT
ATCTTCGAGAATTATTGGAATGTGATTTAGATGTTATTGTATTTGAAGGA
GTGTAATTTTTTCCACTTCTAATTCCAGAATAATTATTGTTTCTTGACAT
GAAACTATCAGGATTGGTAGTCTTGAATTGTTGATCATGACGAACAGGAG
GAGGTAGAGAGTCTCTTTTTTCATTCTCAGTCGGATAAAATGTTGAATTC
GTAAAAGATGGGCCATGGGAGTAATTTAACTTCTGAGGGTCATTGCCGTC
TACACCATGATATAAAAATATTAATTTATTTAATATAAAACGAAATGTTA
AAACATACCAAAGGATCTCCTAGAATCAATAAAACCATCTGGTCTGGCAC
TAACATATGGTCCAGGTTCATTAAAAAACACATCATTTATGATCTTACCA
ATTGGACCATTGATACCCATCATATTTCGGTATTTCAAACTCTCATCGAC
AAAATGTTCTATACTGCGTGACATTTTATAACCAGCTCGCCATGCTTCAT
TATTGTAGCTCTCAMCGRGCCTTGCAGCCTCTCTAGGTCCTAATTCAGTA
TAGACGACTTCATCAAACATGGTTTCAATAGCTTCAGGCAAAACAAAGTT
AGCTGAAATAATAATGAAAAACTTGTTAAAGAATTACATCCCTAAGAGGC
TTTCACTGAATTAATACCCTTCATTGTAAAAACAGCATCCTTCGGAATTT
CTTTTCCTTCCTTCATTTCACATTTAGCAATGCGTTGCATATAAATATCA
TCGGTAGGTAATACAACAAAAGCTTTTCGCTGAAATCCATTAAAAGGTTG
AATTTTCCTTTCACGAACTTTGGGCGAGACATTTGCCTAGAATCATAAAT
ATATAATAGCTACTGTATATTAAAACAAAATAATAATATAATACTTGATC
AAAAATATAGTTTCTCCGCCTTGTAGCTGCGATAGTTGTTATAGTTCTCA
AACAATCTACAGCAGATCTAATTGTATTATCCCATCTAACACCCTGAATA
AGTTTGCGAGGCATTCCCATACAGGACATTTTATCTAAAATGGACGATAT
TCCAAGAATGTTATAGCGCTTATCCGAATTATTAATCTTGTAATCTTCGG
CGAAGAATGTTTTGCCGGATCCAGGTAAGCCAATTAACATAATTATTTCA
CAATCTTGTCTGGTTTTAGGGGCCCTAGACCCATGAAACAAGCCATCGCA
CATTTCCAATTGGCCAATATGTATATATTGTGGAATAATTGCCATTAATG
GATCAGCCAACTGGCCAAAGTTGACAGTAAACTCTTGATTTTTCGAACAA
ATATGGGGAAATAAAGCTCTTCCAGACAATTGAGATTGCTGGATAGAAAA
AGCAATACCCAAAAATTCCCCATTGAGCGTATAACCAATATTAACTGGAT
CACAATCAAGATCCTAAGGATATAATCAATAAACTAATTATAATTTATTT
TATAAATAAATCTAAATAATATAAAATCAGTACCAAATAGCAACCAATAA
CATCTCCGAACCCGAATGGTTTACCATAGTCTTCAAATTTATTTGAGACA
ATTGCCTTTGCTGTTCCATCATAAGCGTATGAGAATCCTTCTTCTCCAAG
CTGAAGAGAAGATTCATCAATCGACCAACCACATCTCAGAATATGAGGAC
TGACTTCATTCAAATGACTCACATCGTTATTACTATTGATGATGACTTCA
TAACACACTTTTCCTCTCGTGGCCCCATAATTGGCACGAGCTCCTGCCCA
CATGTATCCAAAACCTTCATTAGAAATTGGTTTTCCACTGCAAAAATTAT
TCCTATCGACTTCCAGATTTAAATCCGAATTATCTACATGAGAATAATCG
TTTTAAAAAATACATTATATAATTTATTTTTAGAACAACTTACACCAATC
CAAGGTAACAAATTCATCACTCATGAAAGGTTCATCCTCAATTGGAATTG
CATTAGAATCAAATCCACTTGTTTCATTCGTAGGAAAATCTCTATATAAA
TCGTCATTGTCGGACCAAATGTGGAAGSTCTATTAAAAAAAATAGACAAA
ATTAAACTGAAAGAACAATTTATATATAGGGTTTTACTTTTAACCCTACA
ACACTGCATATTTATTATATTTGATACTTGAGATTTTTAATCCTCAATTT
GAGCAGTTTGACAATTTTTTGGCTCAAAAAATTTAAGGCTATAATTGGAA
ATATATTATCAATGGATCATTCAACAACAACAAAAAAAGTTTCTTAGTTA
TGAGACTTATAACCTTCCTTTGTTAAAAAC back to top
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