EMLSAT00000004919, EMLSAT00000004919-700766 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000004919
Unique Name	EMLSAT00000004919-700766
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s259	supercontig	LSalAtl2s259:1047053..1053819 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000004919 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000004919	EMLSAG00000004919-687685	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000021511	EMLSAE00000021511-730439	Lepeophtheirus salmonis	exon
EMLSAE00000021512	EMLSAE00000021512-730440	Lepeophtheirus salmonis	exon
EMLSAE00000021513	EMLSAE00000021513-730441	Lepeophtheirus salmonis	exon
EMLSAE00000021514	EMLSAE00000021514-730442	Lepeophtheirus salmonis	exon
EMLSAE00000021515	EMLSAE00000021515-730443	Lepeophtheirus salmonis	exon
EMLSAE00000021516	EMLSAE00000021516-730444	Lepeophtheirus salmonis	exon
EMLSAE00000021517	EMLSAE00000021517-730445	Lepeophtheirus salmonis	exon
EMLSAE00000021518	EMLSAE00000021518-730446	Lepeophtheirus salmonis	exon
EMLSAE00000021519	EMLSAE00000021519-730447	Lepeophtheirus salmonis	exon
EMLSAE00000021520	EMLSAE00000021520-730448	Lepeophtheirus salmonis	exon
EMLSAE00000021521	EMLSAE00000021521-730449	Lepeophtheirus salmonis	exon
EMLSAE00000021522	EMLSAE00000021522-730450	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto780313	auto780313	Lepeophtheirus salmonis	polypeptide
EMLSAP00000004919	EMLSAP00000004919	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s259:1047053..1053819+

protein sequence of EMLSAP00000004919

>EMLSAP00000004919 ID=EMLSAP00000004919|Name=EMLSAP00000004919|organism=Lepeophtheirus salmonis|type=polypeptide|length=1491bp
MGGKESKQFPLSSEEALKRVTEGEKRRLQDAFRRLSSRSNVSGLISKYNF
VMDVLGDIVPSKLADRIYTLAVWSSSSSANAKGLNFREILSLLVLITRGT
REEKIKMMFGLLTSSNGVCIEKSEMFRLVREWERDCLPHELQHLFAESEK
VSYDRFLIWVENYPDCLGLSKWLLTPTDHFSLVNKLDTPTFYQTLAGXTH
LDEEEIVELEKRFWTLTGSSHSGQIDLNLVKNIVSPPLPDDLAAPFFHAL
DENEDGHIDLKELSCGVSXACRGPELERQKFVFKMFDLNRDGVLNEDEFN
SMITLVNEVYLQLNKNDGNSFVTKNYGKGTHLTLQEFLVWTTSCESGHMK
EFSKLLYQLCHVCLGLKPLTRSNEGDIVRGWIEREEKLPHSSGSIWNLVS
MNWWSNWHSYVNFHPHLTPKLLNKSKKLNAVASNHSQGVVATGYSSISDI
NSGSTTSLSSLSSKKSIDESNITSSANALPRPGHIDNSNLTIPSPYRISS
LTGEGARLKPKIQQGKDFELVPKRLWEALILWYGDAGVMSLPRQTILNSN
GVFEVELYPIAVKIMKHQVVPRPPQIPTVVGGYSAAAIHAAGNLPTTTRR
YIANQAVFSRRTTINQISDFLSSRLVIKMEDMRLWFYRDDLNMKQLSENE
CRTLEDLGFRDDDGILVEVRSRDGTWPEEISSLMSGGNKNNFNNNNNNIS
GIKGVTGLNNLGNTCYMNAAIQCVAHTQILYKYFNNNCHLFELNRTNPLG
MKGHIAKRFGDLVRDMWSGEARTIAPIKLRWTIGRYRQHFSGFQQQDSQE
LLAFLLDGLHEDLNRVTEKSYFELKDSDGRPDDEVAAEAWESHSARNKSI
IVDLFHXXXXXXXXHESVRXDPFTYLSLPLPMESSVHIEVIVIRQNGSIP
TKYGLTLDMDSKYTAIRNHLTKLCRIPAENLILVDVPPSEEQKVKNMNGT
CIFAYEFKARPESKLSHVTTTGNTQTFSDIQRSRCTQANDRLNEGANGHV
KGIEEKSKQEIQLEGNGSIKSNSVFPLDLSKDLGDXQRGIIVGLNRKMIP
QESYFLSTQKYQPVLFGLPLIINCDEKTSYQDLYKSVWTQVSRLVSPLPP
RETTTQNHALDCDDSLKYEYPFVLKVVQKGGSWCHWCPWHRFCRGCVIPC
NTKEYSFASSFIAIDWDQTALHLRYRSTQEKVYDEDYSVQESLKRATEPI
TLGKCLQAFTREEQLGSEEKYYCSICETHQLAAKKLQIWKLPPILVRILY
LEYHLDRGLFIHILQIVHLKRFHYLNGRWIKSHKIVEFPSKEFEPLDYLA
AVPSMTLKRFKHLKLSNSTPDSPLQTLQCNGNLSGSGSIDYDDDDVFETT
DEPQNTTVYNRRTRQESTSLNMLPVIDDNLRDFHQHRLMDGSEPLDIKYN
MYGMVCHSGVLGGGHYTSYTKHSNKWYLNNDSTCKEVQESQIDKSSAYML
FYERESLSSENYLPKISGPLPSTQDLDDELDIDFKKQCSLM

mRNA from alignment at LSalAtl2s259:1047053..1053819+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000004919-700766 ID=EMLSAT00000004919-700766|Name=EMLSAT00000004919|organism=Lepeophtheirus salmonis|type=mRNA|length=6767bp|location=Sequence derived from alignment at LSalAtl2s259:1047053..1053819+ (Lepeophtheirus salmonis)
ATGGGGGGTAAAGAGTCGAAGCAGTTTCCGTTGAGTAGTGAAGAGGCTCT
CAAAAGAGGTGAGGAAGATTCCATTGTATTCCCAGTATCTGATTCTCTTC
TTTTCAGTGACGGAAGGGGAAAAAAGAAGACTTCAAGATGCTTTTCGGAG
GCTCTCTTCACGCTCAAACGTGAGCGGTTTAATTAGCAAATACAACTTTG
TGATGGACGTCCTTGGTGATATCGTGCCCTCCAAACTTGCGGATCGGATT
TATACTCTTGCTGTCTGGTCTTCAAGTTCCTCTGCGAACGCTAAAGGACT
TAATTTTAGAGAAATCCTCTCCCTTTTAGTCTTAATTACTCGTGGAACGC
GAGAAGAGAAAATCAAAAGTAATGTCCGAATAGTTGTTACTTAGTAATTT
GTGCCTATTTTGATTGCTTCCTCCATTTCCTTGTAGTGATGTTTGGTCTA
TTGACGTCCAGCAATGGAGTTTGTATAGAAAAGTCCGAGATGTTTCGTCT
TGTCAGAGAATGGGAAAGGGACTGCCTTCCCCATGAGCTTCAACACCTCT
TTGCTGAAGTAAGCCACATATTTTCTATTATCCCTTCGTAAATTAAATTC
ATCCTCCAATTCATGGTTCAGAGTGAAAAAGTGTCATATGATCGATTTCT
AATTTGGGTTGAGAATTATCCGGACTGCTTAGGGTTGTCCAAGTGGTTAT
TGACACCCACAGATCATTTCTCTCTCGTTAATAAGCTGGATACTCCTACC
TTTTATCAAACATTGGCTGGSGMCACTCATCTTGATGAAGAAGAAATAGT
TGAATTAGAAAAAAGATTTTGGACCTTGACGGGCTCTTCTCATTCGGGAC
AGATAGATCTAAATCTTGTCAAAAATATTGTTTCACCTCCTCTTCCTGAT
GATTTAGCAGCACCTTTTTTTCATGCTTTAGATGAAAACGAAGATGGACA
CATTGATTTGAAAGAATTGTCTTGTGGAGTGTCGGSTGCATGTCGAGGMC
CAGAACTGGAACGCCAGAAATGTACGATGTATTTTATATGATTATAACGC
AATTAAGTCATCACAAATATTTTTTTTTTCAGTTGTTTTTAAAATGTTCG
ATCTTAATCGAGACGGAGTTTTAAATGAAGATGAGTTTAACTCGATGATA
ACATTGGTCAATGAAGTTTACCTTCAATTAAATAAGAATGATGGAAATTC
CTTTGTGACCAAGAATTACGGCAAAGGAACTCATTTAACCCTTCAAGAGT
TTCTTGTATGGACAACATCCTGTGAGAGTGGGCATATGAAAGAGTTTTCT
AAGCTCTTATACCAATTATGCCATGTTTGTCTGGGACTCAAACCTTTAAC
TAGGAGTAATGAAGGCGATATTGTGAGAGGTTGGATTGAAAGAGAGGAAA
AACTACCACACTCTTCAGGTTCGATTTGGAATTTGGTATCAATGAACTGG
TGGAGTAATTGGCATTCTTATGTCAATTTTCATCCTCATTTGACACCCAA
ACTCTTAAATAAGTCAAAAAAATTAAATGCTGTTGCATCAAATCATTCTC
AAGGGGTTGTAGCTACAGGTTATTCCTCAATATCAGATATAAATTCTGGA
TCCACAACATCACTAAGCTCTTTGTCGTCCAAGAAATCTATTGATGAGTC
AAATATTACATCCTCAGCCAATGCTCTCCCACGTCCTGGCCATATAGACA
ATTCGAACTTGACCATTCCTTCTCCCTATCGTATTAGTAGTCTTACTGGA
GAAGGGGCTAGACTCAAACCTAAAATTCAACAAGGAAAGGACTTTGAACT
TGTCCCTAAGAGATTATGGGAGGCGTTGATTCTTTGGTATGGAGATGCCG
GGGTAATGTCTCTTCCTCGTCAAACCATTCTTAATTCTAATGGAGTATTC
GAAGTTGAGTTGTATCCCATAGCCGTCAAAATAATGAAGCATCAAGTCGT
TCCTAGACCACCTCAAATTCCTACTGTTGTTGGAGGATACTCGGCTGCAG
CTATACATGCGGCTGGAAATCTACCAACTACTACGCGMCGTTATATTGCA
AATCAAGCTGTCTTTTCCAGACGTACTACTATAAATCAGATCAGTGACTT
TTTATCTTCTCGACTTGTCATCAAGATGGAAGATATGAGACTCTGGTTTT
ATAGAGATGACCTAAACATGAAACAGTTATCAGAGAACGAATGTCGTACA
TTAGAGGATCTTGGCTTTCGTGATGATGATGGTATCCTGGTTGAAGTGAG
AAGTCGTGATGGAACTTGGCCTGAAGAGATTTCTTCTTTGATGAGTGGTG
GTAATAAAAATAATTTTAATAATAACAATAACAATATCAGTGGCATTAAG
GGTGTCACTGGTCTCAACAATCTCGGGAATACATGCTACATGAATGCTGC
GATTCAGTGTGTTGCACATACTCAAATTCTTTACAAATATTTTAACAACA
ACTGTCATCTATTTGAGCTGAATCGAACCAATCCTCTGGGCATGAAGGGA
CATATAGCTAAAAGATTTGGTGATCTTGTTCGAGATATGTGGTCTGGAGA
AGCTAGAACTATAGCTCCTATCAAACTTAGATGGACGATAGGTCGTTATC
GTCAACATTTTAGTGGTTTTCAACAGCAAGATTCTCAGGAACTGTTAGCT
TTTTTACTTGATGGTCTTCATGAAGATCTAAATAGAGTGACTGAAAAATC
TTATTTTGAATTGAAAGATTCTGATGGTAGACCTGATGATGAGGTTGCTG
CTGAAGCGTGGGAGAGCCACTCTGCAAGGAATAAGTCTATCATTGTCGAT
TTATTTCATNNNNNNNNNNNNNNNNNNNNNNNNCATGAAAGTGTAAGGKT
CGATCCCTTCACATATTTATCATTACCTTTGCCAATGGAGAGCTCTGTTC
ATATTGAAGTGATTGTTATTCGCCAAAACGGAAGCATACCAACTAAATAT
GGACTTACTTTAGATATGGATTCAAAATATACTGCTATTCGTAATCATTT
AACTAAACTATGCCGGATACCGGCAGAAAATTTGATTCTAGTCGATGTAG
TCAATGSTCAATTCAGAGKAAGTCATTTTTCTTCATCATTAAATTCTTTT
TGTAGTTACAAAGTTGTGGTTTATTTGTTCAACATAGGTGCCTCCGAGTG
AGGAGCAAAAAGTTAAAAATATGAATGGAACTTGCATATTTGCATACGAA
TTTAAAGCACGTCCTGAATCGAAATTAAGTCATGTTACTACTACTGGAAA
TACTCAGACCTTTTCAGATATTCAAAGATCGCGGTGTACACGTAATATAT
TTTAATGCTTCATATTTCTTCTAATAATAATATTTATTTGTATTTCTAAA
TAATAGAGGCGAATGATCGTTTGAATGAAGGAGCCAATGGACATGTTAAG
GGAATTGAGGTATGTGCAATTTTAACAGTCATCATCACAGTTGTTTAAAC
TTAAATGTTATAATTTATTTTCTATAAAGGAAAAGAGTAAACAAGAGATT
CAACTTGAGGGAAATGGATCCATCAAGTCAAATTCAGTTTTTCCTCTGGA
TCTATCAAAAGATTTGGGAGATTRCCAACGTGGGATAATTGTTGGTTTGA
ACAGGAAGATGGTAAGTAAAACATATTACGTTGTTGGTTTGTGGATAATC
TATTTAGTGAAAGATTATATCTAACATATGTATCAGCTGAAGTCATTAGC
ACTTCAAAAAGGTTAATTTAAGTTTTTATCGCCTGCTGTAATTATAAATA
CATACACAGCAAATGAAAAAAAAATCTATTTTAACTATTTAGTATAGTGT
CCCATGCTTTTTATACCTACCTAGATACATTGTCTAGTAGGAACTTTTTA
ATGTAAATTCGGGTTTTTTTTGTTGATAAATTGAAGTAGCTTCTTATAAA
TTATATACTAACGAAAGGATTTTAAATAGGGATTGCATGAGATAGTAAGT
CATTTTCTAGCTACAAATTACAATATTAGGACCTATTAATTATTATTGAA
ATAAATATTATTCATCTATGAATTCTGATATAAGCTAAAATAGTTTAATT
AAGAACTGATGACTAAGAAGAATGACAAGTTATCTAAAGTAGGAGAAAAT
ACAGTTTTCGTTTAAGTCAATAAATTCAGTAAATACTGAGTATCATGTTG
AACCATATGAATGGAGAAATACACTTAGTTATTTGTCAATGATTCAAAAA
GTCACTTATAATCCTATTGTTGTAGTTTTTGGGTTCCCTATCTCTCTTGA
AATCCTTTTATTTGATGTAGAATTGATTGATTGATTGCTTTCCGTACCTT
AGATTCCTCAAGAGTCCTATTTCCTTTCAACCCAAAAATACCAACCTGTG
TTATTTGGACTTCCTTTGATAATAAATTGTGATGAAAAAACCAGTTACCA
AGACCTATACAAATCTGTTTGGACACAAGTTTCAAGACTCGTTTCACCTC
TCCCACCCAGAGAAACAACTACTCAAAACCATGCATTAGACTGGTAAGCA
AGCTTGTTTGCGAAATAATTAATATTTATTATACTCACTTTTTCCTGTTC
TTCATTTTCAAATAATAACTTATTAGTTTAAAATTTATTCACTACCCTAA
TATTTGAATTTTATTTTTTAGCGACGATAGTTTAAAGTATGAGTATCCTT
TTGTTCTCAAAGTCGTCCAAAAAGGGGGATCCTGGTGTCATTGGTGCCCT
TGGCATCGATTTTGCCGAGGCTGTGTAATTCCGTGTAATACTAAAGAATA
CTCCTTCGCCTCTTCATTCATTGCAATTGATTGGGATCAAACTGCTTTGC
ATCTTCGATACAGATCAACTCAAGAAAAGGTATAATATGTTTAGTTCAAT
TATATTGTAAGGCAATCGCCGTTCCTTTGTCTCTCTTAGTTTAATTTGAG
TAACCAAACGAAATTATTTTTTTAAACCCAATTTCACGCTCCATATTTTT
TAATCTTTATATGATTATCCTACTCTTTTGACTGGATTCAATGTATGTAA
GAGAGAAGGAAATAAGAGAAGTTAGGTTACAATGACATAGGTACATGATA
TGATGTTTTATATTCGGTTTAGGATAATAAAATATGAGCTACATACTAAT
AATTTATATTCCTTATAGTGAAGGATTTTTTTATTAACAATAATTTATAA
TCATTTTCAGGTATACGATGAAGATTATAGTGTACAGGAATCATTAAAAA
GAGCTACAGAACCTATTACGCTGGGTAAATGTCTTCAAGCTTTTACTAGG
GAAGAACAACTGGGTTCAGAAGAAAAATATTATTGTTCCATTTGCGAGAC
ACATCAATTGGCTGCTAAAAAGCTTCAAATTTGGAAACTACCTCCCATAC
TTGTTCGTATTTTATATTTAGAATATCATCTTGACAGAGGTTTATTTATA
CATATATTACAGATAGTTCATCTCAAGAGATTTCATTATTTGAATGGTCG
ATGGATAAAGTCGCATAAAATAGTGGAGTTTCCTTCAAAGGAATTTGAGC
CCTTAGATTATTTAGCCGCTGTTCCATCGATGACACTCAAACGCTTTAAG
CATCTCAAATTAAGCAATAGTACTCCTGATTCCCCCTTACAGACTCTACA
GTGTAACGGAAATCTAAGTGGTAGTGGAAGCATCGACTATGATGATGACG
ACGTCTTTGAAACTACAGATGAACCTCAAAACACCACTGTTTACAACCGT
CGAACTCGACAAGAGTCTACATCATTAAATATGCTTCCCGTCATTGATGA
CAATCTAAGGGATTTTCATCAGCACAGGTTGATGGATGGTTCTGAGCCCC
TGGATATTAAGTACAATATGTATGGAATGGTTTGTCACTCGGGTGTTTTG
GGAGGTGGACATTATACATCATATACCAAACATTCCAATAAGTGGTACTT
AAATAATGACAGTACTTGTAAGGTAAGTAATGATGAATCCCTCATCTCAT
CCCATTCTTGCTATAGGTACTTTATCATTACTCTTCATTGATTTCAGGAA
GTGCAAGAAAGCCAAATCGATAAATCTAGTGCCTATATGCTATTTTATGA
GAGAGAATCCTTATCCTCAGAAAATTATCTCCCAAAAATTTCGGGACCTC
TTCCAAGTACTCAGGATCTAGATGATGAATTGGATATTGACTTTAAAAAA
CAGTGTTCCTTGATGTAGTAGTAGCAATTTAACTATCGGCGTAAATAAAA
GGACATTCACTATTATTATTTTTAATTATAAACTAGGACAATTCTCTCCT
CGAAAATGTTGATGTTATTCAAAATAATACAAACATATTTATGTAGTATA
TGTATACTTGGGGTTTTTATGAAGAATAATTTTGAAATGATTTATTGTTT
TATTATATTGATATATACATATTCTATTCATCCTTCGAGTTTCTTCCTTT
CTGGGTAACAGTTTCTTTTATTTTGCACTGGCCATTATTATTTAAAAGAA
GATGCGAAAAAAGTGTATGATGAATAAAATAACAAGTAATAAATATATTA
ACATATTAGTGATATTTATATGGCGAATTATTTGTTCTAGTTATATGTAA
TTGTTGCTCTACATATATAATACTCTAATGTTTGTAAAGCAGAGCTCTTG
GTCCTATCTTCTAATTCTTTCTTTTTTCTCATTACTTTTATATAATATGA
AAAAAATAATTCTTTGTTTTGTATTACCTACGCTTGTTTTCTTTGTAAAA
CTGTTTTTTTAATTTATTTTTAAAAGTTCGTTTTTTTAACAATTGTTAAA
TGATAAAAATAGAAAAG

Add to Basket

Search form