EMLSAT00000004933, EMLSAT00000004933-700780 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004933
Unique NameEMLSAT00000004933-700780
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s259supercontigLSalAtl2s259:868481..870317 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004933 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004933EMLSAG00000004933-687699Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021606EMLSAE00000021606-730534Lepeophtheirus salmonisexon
EMLSAE00000021607EMLSAE00000021607-730535Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779953auto779953Lepeophtheirus salmonispolypeptide
EMLSAP00000004933EMLSAP00000004933Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004933

>EMLSAP00000004933 ID=EMLSAP00000004933|Name=EMLSAP00000004933|organism=Lepeophtheirus salmonis|type=polypeptide|length=119bp
MELVCLFDGDWDGSFEVKFIEAKSYVTPIRIKSIPRMELNGLLIMTGLMK
SIINALQWETEKVYMWSDSKTALNWIRNDKDSFKAHVSEIQETFSQELIA
NLPAMAQQLGQLPGIRMAK
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mRNA from alignment at LSalAtl2s259:868481..870317+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004933-700780 ID=EMLSAT00000004933-700780|Name=EMLSAT00000004933|organism=Lepeophtheirus salmonis|type=mRNA|length=1837bp|location=Sequence derived from alignment at LSalAtl2s259:868481..870317+ (Lepeophtheirus salmonis)
ATGGAGCTTGTGTGTTTGTTCGATGGAGACTGGGACGGAAGTTTTGAAGT
CAAGTTTATAGAGGCAAAGTCTTACGTAACTCCTATTCGAATCAAAAGCA
TACCTAGAATGGAACTAAATGGATTATTGATCATGACAGGACTGATGAAG
TCTATTATAAACGCGTTACAATGGGAAACAGAAAAGGTTTATATGTGGAG
TGATTCAAAAACAGCATTAAACTGGATTCGAAATGATAAAGACTCTTTTA
AGGCTCATGTGTCAGAGATTCAAGAGACTTTTTCGCAAGAATTGTTTTGT
TTCGTTCCAGGAAAGCAAAACCTGGCGGATGCTCTCACAAAACATACAGG
GAGCGGGGATCAAATTGTCGCCTATTTTAAACCTTGATAACTTGAAGACG
ACATTATCAAATAAAAAACCGGTTACCAAATAGGAAAGCTATTCATGTCA
GCTGACGATACGTAGTTAAGTTAGCATCATGCCGTCATCATATGAGGAGA
TAAAGAGCTATAATTGGAATGAGGAGCTTTCGAGGRCCGCCATAGTCATG
GCATTGCTTAATAATGGAAGTGAAACCTCCAATTCAACGATTGCTTCAAC
GTTAGGAGTGAATTTACGGACTGTTCCGCGTATCTGTAAGAAGCTAGAGG
ACACCTGGGATGTTGATGCCACTATAAAGAGGGCACCCAAGGAGGAGGGC
GCCGACAGGAAGGTCAGAGACACCGACTTTGTCGACAAGGTGAAGAAGAT
GGTTGAGGATGACCCTACCAGGTCAATGAAGGCCGGAGACAGGCCTTGGG
TGTGGCAACAGGACTCAGCACCCTGCCATGTGTCCAAAATATCCATGCAG
TGGTTAACCGAGAACTGTTATGACGTCGTAACCAAGGATTTGTGGCCTCC
GAACTCTCCCAAGCTTAATCCTTTGGACTATTTTGTCTGGGGCTATGTCG
AGAGACATACCAACAGACATCCCCATAGCACCAAGGCCAGCCTGATGGAC
TCCATCAAGGAGGTATTCGGCAACATGGACAATGAGATGGTCAGAAGAGC
CTGCGGCCGGTTCAGAGGTCGTATTGAGGCTGTTATTGATGCCAACGGTG
ATTATATCATATGAATGGCTACTCTATACCTATATGCTCYTCATNNNNNN
NNNNNNNNNNNTTTTKGGCGACAATTTGATCCCCGCTGCCTTTATAACCG
TTAATGACCTTAAATTGGCATCACAGTGAAGACTGGCCARAARAWCCCCA
AAATATCTATATGAATGTTCGTAACGATNMAGAAATCAAAAAGACTAAAC
GTATAGGAAGAAAATGTAGGGGAATATAAGAACATTTTTTATGGATTTTG
AAGAAGACTTAAGACTTTGGGATTAAAGTTAGAAGACAGTTTTTGTGTGG
AAAGATGTGCTTAATAAAGTACATAGAGAAGATAATATGGGAGCAAAATT
GAAGGTCGTTAGAGCCTTTTAAGGGAATGTGGATTTTAAGAAGAAATAAT
TTAGAAGGTTATGTCAGGKCTATGATGCAATAGACGAAGTTTATAGAGTT
GGTTGGCGTCTGAAGAAAATAGATTGAATGGCAAAAAAACAAAAATCGCC
TATGATTATTCCTGGAGGCATAGTTGCAAAATGTATCGTACAACATCACC
ATGAGAAGGTTTATCACGGGGAATCAAGACGAACACTGCATTTATTTTAC
TTGATGGGTTGTGGATAATTGGACTATCACGTATAGTATAGAAAGTTATA
AATACTTGTATCGATTGTAGAATTGCAAATCTACCCGCTATGGCTCAACA
GTTGGGACAATTACCTGGTATTCGTATGGCGAAATAA
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