EMLSAT00000004951, EMLSAT00000004951-700798 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004951
Unique NameEMLSAT00000004951-700798
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s260supercontigLSalAtl2s260:1030855..1032206 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004951 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004951EMLSAG00000004951-687717Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021687EMLSAE00000021687-730615Lepeophtheirus salmonisexon
EMLSAE00000021688EMLSAE00000021688-730616Lepeophtheirus salmonisexon
EMLSAE00000021689EMLSAE00000021689-730617Lepeophtheirus salmonisexon
EMLSAE00000021690EMLSAE00000021690-730618Lepeophtheirus salmonisexon
EMLSAE00000021691EMLSAE00000021691-730619Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780287auto780287Lepeophtheirus salmonispolypeptide
EMLSAP00000004951EMLSAP00000004951Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004951

>EMLSAP00000004951 ID=EMLSAP00000004951|Name=EMLSAP00000004951|organism=Lepeophtheirus salmonis|type=polypeptide|length=207bp
MESKGAQKSEKEESSLEQVENGLTAIHLALNSLPITKLESGGGCLIYPHL
SDEDFCDYYRKIFDRIAYEELAYSDDGTPRRRNSLIPFLDDAIWSCDLNL
DDAKFPTFGHANSPVEIWKIFYDFYENFETKVNFHWLWKHDLSEATTVPA
WKKIERSNRPVVDRARKERNEHVKSLVAFVKSKDKRTNTPINLKKQLRRG
SLLKALK
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mRNA from alignment at LSalAtl2s260:1030855..1032206+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004951-700798 ID=EMLSAT00000004951-700798|Name=EMLSAT00000004951|organism=Lepeophtheirus salmonis|type=mRNA|length=1352bp|location=Sequence derived from alignment at LSalAtl2s260:1030855..1032206+ (Lepeophtheirus salmonis)
TTTTTGTAGGCGTACAATTAATTTTAAAGGAAGTGTAGTTTCAAAATGTG
TATAACATCCTCCCTCGTCTTAGTTGCTTCTTGAGGCCGTTAGAATGGAG
TCAAAGGGAGCTCAGAAATCCGAAAAGGAAGAGGTTTGAGGCTATCTATT
TAAATATCAAGGATTTAAAAAATATTTATATGTTATTTTTTCCTCGGATA
CAGAGCTCTTTAGAGCAGGTTGAGAATGGTCTAACCGCAATACATTTAGC
ACTAAACAGCCTTCCTATAACGAAATTAGAGTCTGGAGGTGGATGTCTAA
GTCGAAGAAGCTCCAATAATTCAAGTATATCCTCACCTGGTCGTCGAAAC
TCTGGAGAAATCAATCTCCTTGAGCCTCTTCTATTTACTACTNGAGATTC
ATCACGAGTCTGATGAGGATTTTTGTGACTATTATCGGAAAATATTTGAT
CGCATTGCCTATGAAGAACTGGCATATTCGGATGATGGAACTCCACGACG
TCGAAATTCCCTTATTCCATTCCTGGATGATGCTATATGGAGCTGTGTAA
GTGTTTTTTAAAAGTATCATAAAGTACGGTGACCCATTAGTCCTCTTTTT
AAAAAAAATATAAATTCATGAAATGTCCAGTTGATTTTTAAGAACAACTG
GTGCATGTTTAAAATCGACATAAAGTGAAAATAAGCTTTTCAATTAACTA
AAGGAAAACATTTTTTAAAATTTTTATATAAAAGACACGCAAATCCAAAA
TGCAAGGTTAAATAAATGTTTTTTTTTTTTTAGAAGAACGGAGTAATTAC
TACAATGACATAAAATTCCAATTCAAAAGGTTATTTGTCATATATTCATG
AAAAAAAAAACACAATAGGTATATTAATGACTCAGAACTTTTTACTTCAG
CTAATATTATGTGTGATTATTCCAAGTCACTAAAATTCCATGCACTATCT
TAAAGAAAGATTCTTATAACTAATATTTAACATATTTCTTGAGCTAGGAT
TTGAATCTAGATGATGCAAAATTCCCAACCTTTGGACATGCAAACTCTCC
TGTGGAAATATGGAAGATTTTTTACGACTTTTACGAGAATTTCGAAACAA
AAGTTAATTTCCATTGGCTATGGAAACATGATTTATCTGAGGCTACAACA
GTTCCAGCCTGGAAGAAAATTGAGAGATCCAATCGACCCGTGGTGGACAG
AGCACGAAAAGAAAGGAATGAGCATGTCAAAAGCCTCGTGGCATTTGTCA
AATCCAAGGATAAACGAACCAACACACCCATTAACTTGAAAAAACAACTA
CGGAGAGGTTCACTACTAAAGGCTTTAAAATAGACAGATACAGGGGTGTC
TA
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