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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s260 | supercontig | LSalAtl2s260:1196109..1202410 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004956 >EMLSAP00000004956 ID=EMLSAP00000004956|Name=EMLSAP00000004956|organism=Lepeophtheirus salmonis|type=polypeptide|length=538bp
MTLVAESLVLPNICSGRNMNGTSSSGYSLCVGCGTQIHDQYILRVAPNLE
WHAACLKCNECQMFLDEKCTCFVRDGKTFCKKDYVRLFGTKCEKCCRSFG
KNDYVMRAKNKIFHLECFRCVACEKQLVPGDEFALRQDELFCKEDHRESL
VESKVNTMHNNNNNNNIHSKDLLLXSSAILLHHHANLHHHNTSNSSEDNS
EGEYPPLFPFRHQPNLPYSFPAHLDFSDEDMSIVDSQEDVLSGVSSLGGG
GGLGSISFGSKKGSSSALSKKNADRKSARARTVLSEKQLNILKTCYSANP
RPDALMKEQLVEMTALSPRVIRVWFQNKRCKDKKIQNRLLEKQMQRESDG
RKLGYGNMHGIPMVATSPVRHDSPVGMNPVEISSYEPPWKALSDFALNTD
LDRLHPNNPHFQHLVNQMHGNFVPEGGPPPPGGESGPVLDXSPYHPPIHH
PHHPSLLHQGPPPPLDPSNNDHFVPSSEFSSSSAVPPPPGGISPHSSRVD
SPLSEPPNNVVTSSSSGGSNNNDPQPSSNAPSLPPGSN back to topmRNA from alignment at LSalAtl2s260:1196109..1202410+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004956-700803 ID=EMLSAT00000004956-700803|Name=EMLSAT00000004956|organism=Lepeophtheirus salmonis|type=mRNA|length=6302bp|location=Sequence derived from alignment at LSalAtl2s260:1196109..1202410+ (Lepeophtheirus salmonis)
CGAGATTTCAAATTAGTTATAAGAAAGATTAGTTTCGTGGTGAATATATA
CGACATCAATTAATAAATGTTTATTTAAAACGTGTGCAATGTTCTATAGA
CAGAATTAACTTGATAGATATCAACAACGGACTCAAAGTGAACGTGTGTG
TGTGTATATGTGTGGAATGAAGAGACTTGGAAAACGGAGAGCAAGTCCGT
GGAGAGGCTCAGTCATCATCACACATTAAGAGACATTCAGAGAAATAGTT
CAGAGCTTCTTCATCAGACAAAGAGCAAGTCTCAAATCAATTTGATTCAA
CAACATMCTCTAACTAACAAATCAGTTMCTCTCCCAACATGACACTTGTA
GCCGAGTCATTAGGTAAGACCCATGAGATCGATATTTATTATTCTATAAT
ATTATGAGATATAAGGCTAATGTAAATCCTGGGAGTGTAGAATTGATTTC
CGCTACTCAAATTTCAAGGTAGACTTAGTTATTAGCTAATACGATTAACT
GCCTTGTAACTTGAGGTGCACGGAGGGGGTTTGATTTGTCTTTTTAATAG
TATTATGACTGATCGTATTTACATTTTTTATTCTAGTGGTTTGAATCAGA
TTTATCTGATAGATTAATACCATATAGTTATTCAAAGGAGTTCTTTTATT
TTTGGTCCTCATATAGTTCTGCCGAATATTTGCAGTGGACGGAATATGAA
TGGAACTAGTAGTAGCGGCTATTCTCTGTGTGTGGGATGTGGCACACAGA
TCCATGACCAATATATCCTTCGTGTGGCTCCTAATCTGGAGTGGCATGCC
GCCTGTCTCAAATGCAATGAGTGCCAAATGTTTCTTGATGAAAAGTGTAC
TTGCTTCGTAAGAGACGGGAAAACGTTTTGTAAAAAGGACTATGTTCGGT
AAGTTCAAAATAATTTTTTAACCCCTTTCAATTATGTTTAAAAGCCTGGA
TCCAAATTTAAGTCCTAGTTTTCATACACAAATTAAAATAAGATCAGTTT
GTGTTAAGGAACCAACTGTTACTACTATGATCTAGAACAAAGATGCCCAA
CGCTTTATTATACTGGGCTCCATTTCCAATTGAAATATATTAATGGGCCA
CAGAACATATTSAATTAAATTTCATGAAAAATGGCTTCAATAAACAAACC
CATTAAATATATATATTTATTTCAAATTTAGGCCAAATATAAAAAAAAAA
GACTAAATCTAATTTTTCAAGGGCAAAATACTTGAACAATGGCAATTATT
TTTTATTTGGAGAAGGGGGGCTTGGTTATGTTGATTTTTTTGAAAAAATT
AAGAATTTTGCTCCGTCGATTAATTTGATCTAATATTTTTTTTTTTTGAA
AATAAATCTTTAAAAAATTTTAAATATCTATTTTCTCTTTTAAATTTTTT
TTTCCTCGAAGTATAATTTTTCAGAAATTTCTTTATTTGGGGGTGATATT
GCGATACTTTTTGTAAAAAATACTATTTTAAGTAATGAGCCGCACTTAAA
ATAAGGTCATTTTGCCTTACTAGAAAGGTTTAGAATGCTTTGGAAACCCC
CAGATGAATAATAAAGATATCCTATGATTTTGCAGATTATTTGGCACAAA
GTGCGAAAAGTGTTGCCGGAGCTTTGGAAAGAACGATTATGTGATGCGTG
CTAAAAATAAGATATTCCATTTGGAATGTTTCCGTTGTGTTGCCTGCGAG
AAACAGCTCGTTCCCGGGGATGAATTTGCTCTCCGACAAGACGAGCTCTT
TTGCAAGGAGGATCACCGAGAGTCCCTTGTCGAGTCCAAAGTCAACACCA
TGCACAATAATAATAATAATAACAATATCCACAGCAAGGATCTTCTCCTG
GMCTCCTCTGCCATACTTCTCCATCACCACGCCAATCTCCATCACCACAA
CACTTCCAACAGCTCCGAGGACAACTCTGAGGGTGAGTACCCCCCTCTGT
TCCCCTTTCGTCATCAACCGAATCTCCCATATTCCTTTCCAGCACACCTC
GATTTTTCCGACGAGGATATGAGTATTGTTGACTCCCAAGAGGACGTACT
GAGCGGTGTGTCCAGCTTAGGCGGCGGAGGTGGATTAGGAAGTATATCCT
TTGGATCTAAAAAGGGATCTTCCTCCGCTCTTTCAAAGAAGAACGCGGAT
CGGAAAAGTGCGCGAGCACGAACAGTTTTGAGTGAAAAACAATTAAATAT
TTTAAAAACGTGCTATTCTGCGAATCCGAGGCCGGATGCGCTGATGAAGG
AACAACTTGTGGAAATGACGGCCCTCTCTCCACGCGTTATTCGAGTCTGG
TTTCAAAATAAAAGGTGCAAGGATAAAAAAATTCAAAATCGACTCTTGGA
AAAACAAATGCAGCGAGAAAGTGTAAGACAAAAATTATTTCATCATTAAT
TATTTGATTAATAAGAAAAAGGCTTCCAATAAACCTTTGTAACCTCCCGA
AAATGAATCAACAAACCCACGAACGTTTCTTTTTAGTCCAAATAAAATCC
TAATCTTCTTTTTCAATTGGTCCCCATAAATAAATGATTTGATTTTTTTT
TCTGGTTGATTTTTTGAGTAATTTAAAATCTCTCTTCAGATCTCTCAAAA
GCAAATTACAACAGCTTAATAATAATAATAATATCTAGAAAAAAACGATC
AAAATAAATATATTTTTTTTGTAAGAGAAAAAAAGAAAAAGATCTCTGAT
AAGATAGAAGTCCTGTTATTAGTGGATGGKCTGGTGGKGGGKTCTTTGAG
TAGKCGTGGTGGATTCAAAATGGGGATTCTCTTTATCTTTAAAAAAAAAA
AAAAAAAAACTTTTATCAATTTTTTATTTTTTTGAATTGAATTGTTGTTA
TTCAATCTTGGAATTCCTTGGAGAGGGGGAGAAAAGGAACTAGAAAGAGA
AAAATCTAAATAAAATAAAAAATTTGAAGGCTCATAAGATTTGTTATGAA
AAAAAAAAAAAAAAAATTTTTAATTTCTGCTGTCGTTCACTTGAAGTAAA
TAAATATTCATGAAGTAGATGTCATCATCAAATAATAATTCAGCAAACCC
CATATTAACTCACAAGGGAATCCATGTTCCTGTAACTTCAAAAAATATCA
AATATTTAAATGATTTTATACGGTATACATAACCAGTCAGCTGAATAGTA
TGCATATTTCCCTTTCTAAGCAAACAATTCCACAACATCAAATAGAAATC
TCCTTTTATTGACTCACTTTAATCATTATTTTATTTATATTATTTTCCGT
TAAAATGTACTTATTTATTTTTATATAATATCTTCTCAGGGCTATGAAAT
TACATTTATTTATTTATATATTCATTCGGGAAAGAAAGGGTATTAATATT
AATTGAAAGAGTCAATCATTGAGACACAACAAACAAAGAGAGTCAAATAT
TATTCCTATTCAAAAATTGTCAAAATATATATTATTTATAAGTTCAAATT
CTCCCTTTTTTTTTTCCTTCTTCCTTTTTCTTCTACTTTTCAATTCTCCT
TTTTTTCCCCTTCCCCTTCTAATGGTCAAAAAAAGAATACTGTCAATTTC
TTTTAACGATCCTTTATTTTATTTTTTTTTAAATATATATTAACAACTTA
ACTTTAAGAGAGATAAAGGGAAAATTATCCTTCAAGGTAGAAGTTGGAAA
CTTACTTTGCCATACTAACTACATATTCCCTAAACTACTTTTATCTGACG
AAAAAAAATAAAAATAATAAAATTTAATTGTTTTTTTTACTGATTCCAGG
ATGGCCGTAAATTGGGCTATGGGAATATGCATGGCATCCCCATGGTTGCA
ACATCCCCTGTGAGACATGACTCTCCTGTAGGTATGAATCCTGTAGAGAT
ATCCTCTTATGAGCCACCATGGAAGGCCCTTTCCGACTTTGCCTTAAACA
CGGATCTGGATCGACTTCATCCCAACAATCCACATTTTCAACATTTGGTG
AACCAGGTAAACATATATCTTTATTAATTTGGAGTACCGTCATGGGGGTT
ATAGTCCCTCCAGCCCAAATCAACCCAAAATTATCCGTTCCCTAAAATAA
ATAATTAATGGCGTACCTCAATGGACAATGCACTTGGTAAAACTATTCTC
TTGAACTCAATGTGCGTAGGTTCGCGCCCCGGTCATTCCTAGAAAAGGAA
ATATACTTTATGTATATGGACTTCAAAAAAGATTTCTATGTCAGATGGTG
TAATTTTAATACTTTAACATTTGCTTATACTGAATCAGGTCAACTCCGTC
TGACCAATTAAAGAAACATTTTTACTCAAAAAATGAAGATCCCCAACCAA
AATAAAAACTTGCAAAGACCCTGTATAATAGTGTTGGTTTTTCATTAAGA
AAAACAAGGAGCCTCATCATTTTTGTAAGAGACAACTCATTTGCCCAAGG
ATGTATGTGTTTTGGACCGGTCTTTAAGTACCATATTGTCTATGGTTTCA
AAACAAAATATCCAACTTGACAAAAATTTGGTATATATACAAAAATTGTT
GATCTGGACATATGTTCCGGAGCGTTCGGATACTTTGTTATCAATTCATG
AAATGTACGATTCTTTGTGAGACAACAAACTATTGAGTGTTGATTTATTT
ATTATTAATGAAGTTTCAAAACATATTTTCAAAAAAGAATTTATTAATAT
TTTATTTTTAAATATTCCAAATATCAAGCCCCCCCCCCCACCCACCTAAA
ACTGATTGGACTACGAGTGTTCTTCTTTTTTTTAAATCAGAATAGGTTTT
ACCAATTTAGAGAATATGGGATATTTCAATAAATCTCATATCATTTTTGT
AAAACCAAAACAATAATTTCAAGGACGTATTTTGAACCGGTCTTTAACTA
CTATTTCGTCTATGATTTCACACCAAAATATTCAAAATATCGAACCGAAC
AAAAATCGGGTGTCCACAGGATTTTGTTTTGAGAGGGTTAATTTTTTTTT
TATGAGACAATATATATTTTTTTTGAAACATGTTAGTGTAAAAATATTTT
GGTAAAGGTTGAATAAAAAAAATCACCTATTTTCGCAATGAAAGTAGTTT
TACAAAGGGATAATTTTTGTACGAAACGACCAAAAATTTCTCGATTTCGA
GGGGGTGTTCAAGGGACTACGGTTTCCTTCCTACTTTGAAGTATATGTGA
TAAGTATAATAATTTTTTTTACACACTTAAAAACAACTCTAAAAGGATTT
TTTTTTCCTGTAAAATATCCTAAATCAGGTTGTTTAAATGATAGTCAAAA
AGATTTGAGGTTTTTTATTAGGCTATCAATGTACAATTTTTATCATTAAA
AGCCCCGCTTTTTTAAGTTAAAGGCAATCAATTGCTATAATATAATTTAA
GAAGGTATATTGATGACTCTTATTTTGTCTACTCAAATCACCACTGTTCA
ATTTTTTGCTTTGAGTATTTTCCAAATTGTCTATTTATGAATATATGCAA
AACACAGATTACAGATAATAATTTATCAAAAATAATTATGCATTAAAAAA
CATAGTTCATTATATTTTATGATTTGAGGGTTCTGAAAGATTTTCATGAA
AATAGATAATATCTAGAGCAGGGTATTAGGACACCTTCCAAAAAAGCCCT
ACTAATAATCCACTCCAATTTTCTTTGCAGATGCATGGGAACTTTGTTCC
TGAAGGAGGTCCTCCTCCTCCGGGCGGTGAGAGTGGTCCCGTTTTGGACM
CCTCCCCCTACCATCCTCCAATCCATCATCCGCACCATCCATCACTTCTT
CATCAAGGTCCACCCCCACCGCTGGATCCCTCCAACAATGATCACTTTGT
ACCGTCCTCTGAGTTCTCTTCTTCCTCGGCTGTTCCACCGCCTCCGGGAG
GAATTTCTCCACACTCCTCACGTGTGGACTCTCCATTGAGTGAGCCGCCC
AATAACGTTGTAACATCTTCATCCTCTGGAGGCTCAAACAACAACGATCC
ACAACCCTCATCCAATGCTCCATCACTTCCACCCGGTTCGAACTAATTGG
ATGTTAACTTGGATAATTTTTTTTTGCATCATACATACTTTTTATATTTT
TGAAAAAGAAGAGCCGCGGTGTCGCCATTTTCCCACCCTTGGACTCACTA
TCATACATACATACGAAATAAATAAAATACTTTTATTGAAGCTATTCATA
CATATTACATATTATAAAAACACAAACAATTATTATCATCTTAATGACCT
GTTAATTAACGATGATTAATATACATATACATATATATTATGGTATGAGA
ATTATTCATTATTTCAGTATTGAAGACGCAATCTTTCATTTGTTATGAAA
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