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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s260 | supercontig | LSalAtl2s260:1491039..1496975 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000004974 >EMLSAP00000004974 ID=EMLSAP00000004974|Name=EMLSAP00000004974|organism=Lepeophtheirus salmonis|type=polypeptide|length=1907bp
MFSKKVGGSKKWEEVRKSGQKVLDPKRDTPTRTKHLKLFLDHSESREIAV
FLESHNSEVFFVLYDAFILAETNLRTKGPHKAQREELEAVLFLLENILVY
LPELLGRKWXYHAITRLMSKLLHPGNSWKILKREAMRLFLLWYQSLADAA
GEPLHALFATLVPGFPSPYPGMGLTALAALTPDTQEGPITPGEIAPLIPP
QSGERGRSPDTDITRIFLDVLLELIVSQISLIEWKENKLEKRKKSLIFLL
SKFKTFYMPHIFPDFNWSTSLYRPSLELPEVRKFTTALVDTGDGGKKIDP
MLACRVVVIKWVAQYTHQTRNNQANTLTSNVGLYETGLEGSPGLSNFSGS
GASFERTLDQQSSSFEESNLVREILYGDRDNVNFVHEVYRQAFLLSFRHS
PAIKKVISVYKDWIQMNVPEXPPFLLEPIHPDRDDYKKALLNGESDSTDG
SREPTCVRAGLQNVLQIFVTNAANVFLLEVSAEDPIFLDEQVEMCKRVLN
IYRYMVMNVKMEARTWEQLLFILLQITQLTLPETPPRKRDDFLGGRLAQA
IFQTLIVTWIKANLYVVVSTELWDQFLEVLSSLTLWEELFREWSKTMETL
TRVLARQVYNLDLNDLPLDRLSERAAKKKRGKQGGNHEMKYSHELKLSST
STPQIPLASSSNLHPYYSENENYVSLSSSSNRISPGSRKRIDSSSSYNNS
LGSSNATTRTNDHSNNMKSKTSGRRKRMYRSMSEGNIVRSDYNNIDDEID
GITKTFSSYFSKRRSKSVDFGIIRTSEPWGSRSSSPAPSSSINDSPMQFD
PETMSDGGLSDLIGHHGSNSGGDNEPRSVMSGGSVKGWLPDVAVVLWRRM
LGALGNINQIADTVIHAQIYKYLIELYEVIVKIRNNQGVTLDNMSTPPCP
EYVPPVTIFTPWCFRALSXPDTYQRGRIYALRLLCLMTIRPHDNPLPKTH
LIQFYKLLHQGLTQNKMDIMNILIKFTGPRFFSLMLPGYTAYILDYLYAT
NHIISTSELKGVPRTEATSIVGSLLAFPPIVRDIPVLLPNSNELSLISSA
DIKDQIVGILLKSGRKEPAGLARCISLSSLGIFVYTELIHKSFHPKIKEA
IQVLLTALRFNNKSVAQIASDMLLLLTDHVQSLLDYYPEVPKKIVEVLAR
TLTGLAPKKDSEDEKRLLMSLLFCLGEWTMKIPQQMLSQTQEDGQSLAYL
VFNALQSAALSGCVSITPSPVGPTENNTRREGKNFEAFPQVFNDRSGTIS
SGMLGDFDPNIHVDNTKEGYTSTNSSPQKSVSQPKSEHHLSRNNLEPLPL
FSQNLSIMDSKCPVRLASNAIIAHLLNHVYHFPMGTGAANLSCLISEHDD
VPGYVGDELSMEAFTSPNIQLFVLNDSTLVSLIELPVVMDDDPAFPGIQT
GNSQVRIILRDLSGKFSWDSSILYGPPDGLNKSMEDITSHPEFWSSCDSS
FFLNKKRPCQPLRQRRASILPIYSNTADDMDNLDDLLSYLTYTSPEVMEE
IGKPINTVSQSHFFDCVVEKDIISTVLNQRTSERDYTSNYGKNLLRPVSP
PDPIGGEPKFQFCRSIFNQMGWSSWEKRPHIHLMKKTERLIRELKNLDNI
RGRETHKIAIIYVAAGQEDKHSILDNSSGSQAYEEFISGLAWXXELESHT
GFMAGLXKNKSTGETXPYYATSFIEVMFHVATRMPSCTEESLLQKTRHLG
NDEIHIVWSEHYRDYRRGILPTEFCDVLIIIYPLPNKLFRIQISRKLEVP
FFGPLFNESIVDGKALPGLVRATAINASRAKRSMIPYFQSHYEERAKALE
DIIKNHKESTTYEEFITKVYSPQTLQNLFQPNNPVRXSLXLQELRPRSKT
EIQINRYSSVSETDPLYQNGTSPKNMKKMSFKNVTGKVKTSVIKEENDDI
FHYAKKK back to topmRNA from alignment at LSalAtl2s260:1491039..1496975- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000004974-700821 ID=EMLSAT00000004974-700821|Name=EMLSAT00000004974|organism=Lepeophtheirus salmonis|type=mRNA|length=5937bp|location=Sequence derived from alignment at LSalAtl2s260:1491039..1496975- (Lepeophtheirus salmonis)
ATGTTTAGTAAAAAAGTTGGGGGATCCAAGAAATGGGAGGAGGTTCGCAA
GTCCGGACAAAAGGTCCTGGACCCCAAGAGGGACACTCCCACTCGCACAA
AACATCTCAAACTCTTTTTAGATCACAGCGAGAGTCGCGAAATTGCTGTT
TTTCTGGAATCGCATAATTCAGAAGTATTTTTTGTGCTCTATGATGCTTT
TATACTCGCAGAGACGAATCTTCGGACCAAAGGTCCGCACAAAGCACAGC
GGGAAGAATTGGAAGCCGTTCTCTTTCTTCTAGAAAATGTAAGTGCAAAT
CTGACTTGTGAGTTGGAAGGTGAATTGAATGTCTGGATTTCCATTTCAGA
TCCTTGTGTATTTACCCGAACTCCTTGGGCGAAAATGGYAATACCATGCT
ATCACACGACTCATGTCCAAACTACTCCATCCAGGGAACTCTTGGAAAAT
ACTAAAGCGGGAGGCGATGCGGCTCTTTCTCTTATGGTATCAGTCCCTCG
CAGATGCTGCGGGGGAACCTTTACACGCATTGTTTGCTACTCTTGTACCA
GGATTTCCATCACCTTATCCTGGCATGGGACTCACTGCTCTTGCAGCACT
CACTCCCGACACCCAAGTAAGAGTCAGGGAATGCATGTCTCAATATCCAA
ATAGTTGTTGTCTTTCTTTGTTATATATTTCTTTATTTATTTGCTTACAG
GAAGGACCTATTACTCCTGGAGAAATTGCTCCTCTTATACCTCCTCAAAG
TGGTGAGCGTGGAAGATCCCCAGATACCGATATTACTCGAATATTCCTTG
ATGTCCTCCTTGAACTTATTGTCTCACAAATTTCACTAATTGAATGGAAA
GAAAATAAGTTGGAGAAACGAAAAAAATCCCTGATTTTTCTTCTTTCAAA
ATTTAAAACATTTTATATGCCTCATATTTTCCCCGATTTCAATTGGTCCA
CTAGTTTATATCGTCCATCATTAGAATTACCTGAAGTAAGGAAATTTACA
ACTGCTCTTGTTGACACGGGTGATGGTGGAAAAAAGATTGACCCTATGCT
CGCTTGCCGTGTAGTCGTCATCAAATGGGTCGCTCAATACACTCATCAAA
CTAGGAATAATCAAGCAAATACATTGACAAGTAATGTTGGTCTCTATGAA
ACTGGACTAGAGGGTAGTCCTGGATTGTCTAATTTCTCAGGCAGTGGTGC
CTCCTTTGAAAGGACCCTTGATCAGCAGTCTTCATCTTTTGAAGAGAGTA
ATCTAGTGAGAGAAATTCTTTATGGGGATCGTGATAACGTCAACTTTGTT
CATGAAGTATACCGTCAAGCTTTTTTGTTGTCATTTCGTCATTCACCAGC
TATAAAAAAGGTTATATCCGTCTACAAAGATTGGATACAAATGAATGTGC
CTGAATTMCCTCCCTTTCTCTTGGAGCCTATCCATCCAGATAGAGATGAC
TACAAAAAAGCTCTTCTTAACGGAGAAAGTGATAGCACAGATGGGTCTAG
AGAGCCCACTTGTGTGAGAGCAGGATTACAGAACGTGCTACAAATTTTCG
TAACAAATGCTGCGAACGTGTTTCTTCTTGAAGTTTCTGCGGAGGATCCT
ATTTTCCTTGACGAACAGGTTGAAATGTGTAAGCGAGTTCTGAATATCTA
TCGATATATGGTGATGAACGTTAAAATGGAAGCACGAACTTGGGAGCAGT
TGTTATTTATTTTGTTGCAAATTACACAATTGACTCTTCCAGAAACGCCT
CCTCGTAAAAGAGATGATTTTCTTGGAGGACGTCTTGCTCAAGCTATTTT
TCAAACATTGATAGTAACATGGATCAAAGCTAATTTGTATGTAGTTGTGT
CAACTGAGTTATGGGATCAGTTTTTAGAGGTTCTGAGTTCACTGACTCTA
TGGGAGGAACTATTTCGTGAATGGTCAAAAACCATGGAAACTCTAACACG
GGTGTTAGCGAGGCAGGTTTATAATTTAGATCTCAATGATCTTCCTCTAG
ATAGATTAAGTGAAAGGGCTGCAAAAAAGAAAAGAGGAAAACAAGGAGGG
AATCATGAAATGAAATACTCACATGAACTAAAGTTGTCAAGTACTTCAAC
ACCACAAATCCCCCTTGCCTCTTCATCTAATCTTCATCCTTACTATTCGG
AAAATGAAAATTATGTGTCCTTATCGTCTTCTTCGAATAGAATTTCGCCT
GGATCTCGCAAAAGAATCGATTCAAGTTCCTCTTATAATAACAGTCTTGG
AAGTTCCAATGCTACAACTCGTACTAATGATCATTCTAATAACATGAAAT
CTAAAACCTCAGGACGGAGAAAAAGAATGTACAGAAGTATGAGTGAAGGC
AATATTGTTCGCAGTGATTACAATAATATAGATGATGAAATTGACGGAAT
CACCAAAACCTTTTCATCGTATTTTTCCAAGCGTAGATCAAAGTCAGTTG
ACTTTGGTATCATTCGTACTTCAGAGCCATGGGGAAGTCGATCAAGTTCT
CCAGCTCCATCGAGCTCAATTAACGATTCGCCGATGCAATTTGATCCAGA
AACAATGAGTGATGGTGGATTATCGGACCTCATTGGCCATCATGGGAGTA
ATTCAGGAGGCGATAATGAACCCCGTTCCGTCATGTCAGGTGGCTCAGTG
AAAGGTTGGCTCCCAGATGTTGCAGTTGTTCTTTGGAGAAGGATGCTTGG
GGCATTGGGCAACATTAATCAAATAGCAGATACTGTTATTCATGCCCAAA
TATACAAGTACCTGATTGAATTGTATGAAGTCATTGTTAAAATAAGAAAT
AATCAAGGCGTTACGCTAGACAATATGAGTACTCCCCCCTGTCCTGAATA
TGTTCCTCCAGTGACAATATTCACTCCTTGGTGTTTCAGAGCCTTGAGTT
TMCCTGACACTTATCAGAGAGGCCGAATTTATGCCCTCCGTTTATTATGT
TTAATGACTATTCGCCCTCATGATAATCCTTTGCCGAAGACTCATCTTAT
CCAATTTTACAAGCTTCTTCATCAAGGCCTTACTCAAAATAAAATGGATA
TTATGAATATTCTAATTAAATTTACGGGTCCTAGATTTTTTTCACTCATG
CTGCCTGGATACACTGCTTACATTCTAGATTATCTATATGCTACAAACCA
TATTATATCCACGAGTGAATTAAAGGGAGTTCCAAGAACAGAGGCCACGT
CTATAGTTGGCTCCCTTCTTGCATTTCCACCCATTGTTAGAGACATCCCT
GTACTTTTACCTAACTCAAATGAACTATCCTTAATATCATCAGCGGATAT
TAAGGATCAAATTGTTGGTATTTTACTCAAGAGTGGGAGAAAAGAACCTG
CTGGGCTTGCAAGGTGTATTTCGCTCTCAAGTCTTGGTATTTTTGTCTAC
ACTGAACTTATACATAAGTCCTTTCACCCTAAAATAAAAGAGGCTATTCA
GGTTCTTCTTACAGCTTTAAGATTTAATAACAAGTCTGTCGCACAGATAG
CTAGTGATATGCTTCTTTTACTTACTGATCATGTTCAAAGTCTCCTGGAT
TATTACCCAGAAGTTCCTAAAAAAATAGTCGAGGTTCTTGCTCGAACCTT
GACTGGTTTAGCACCTAAAAAAGATTCTGAAGACGAAAAAAGGCTATTGA
TGAGCTTACTTTTTTGTCTGGGCGAATGGACTATGAAAATACCGCAGCAA
ATGTTGTCACAAACTCAAGAGGACGGCCAGAGTCTTGCCTATCTGGTTTT
TAATGCTTTACAAAGTGCTGCTTTAAGTGGATGTGTCTCTATTACTCCTT
CTCCTGTCGGGCCTACTGAGAATAATACTCGGAGAGAGGGTGAGTAATAA
ACCTATTTTATTAAATATATATATTTATAATATATTTTCAAATTATGCAT
GCATTAGGGAAAAATTTCGAAGCATTTCCTCAAGTCTTTAATGATAGAAG
TGGAACTATATCCTCTGGAATGCTAGGAGACTTCGATCCAAATATTCATG
TGGATAATACAAAAGAAGGTTATACAAGCACCAATTCCTCTCCACAGAAA
TCCGTTTCTCAACCAAAGTCTGAACACCATCTATCAAGAAATAATTTGGA
ACCTCTGCCCTTATTTAGCCAAAACCTATCAATCATGGACTCTAAATGTC
CTGTCAGATTGGCATCCAACGCAATAATTGCACATTTACTCAATCATGTA
TATCATTTTCCAATGGGAACAGGGGCTGCAAATCTTTCATGTCTCATTTC
TGAGCATGATGACGTTCCAGGCTACGTTGGTGATGAATTATCCATGGAAG
CATTTACCTCGCCTAATATTCAACTTTTTGTTCTCAATGATTCTACTCTT
GTCTCTCTTATAGAACTTCCGGTAGTGATGGATGATGATCCTGCATTTCC
AGGAATTCAAACGGGTAACTCCCAAGTTAGAATCATTTTGAGAGATCTTT
CAGGCAAATTTAGTTGGGATTCTTCTATTCTTTATGGGCCTCCAGATGGA
TTGAACAAGTCCATGGAAGATATAACTTCACATCCTGAGTTTTGGTCTTC
ATGTGATTCATCTTTCTTTTTAAATAAGAAACGTCCTTGCCAACCTTTAA
GACAACGTAGAGCAAGTATTCTTCCCATTTACAGCAATACAGCTGATGAT
ATGGACAACTTGGATGATCTTTTAAGTTATTTAACTTATACTAGTCCTGA
GGTTATGGAGGAAATTGGTAAGCCCATCAATACTGTAAGTCAGTCTCATT
TCTTTGACTGTGTTGTGGAAAAGGATATTATATCCACTGTATTGAATCAA
AGAACGTCTGAAAGGGATTATACTTCCAACTATGGGAAGAATCTACTCCG
TCCTGTTAGTCCTCCTGATCCAATTGGTGGGGAGCCTAAATTTCAATTCT
GCAGATCAATATTCAATCAAATGGGATGGAGTTCTTGGGAAAAGAGACCT
CATATTCATCTCATGAAAAAGACTGAGCGCCTTATTAGAGAATTAAAGAA
TTTGGATAATATTCGTGGTAGAGAAACACATAAAATTGCAATAATTTACG
TTGCTGCTGGTCAAGAAGACAAACACTCCATTTTAGATAATTCATCAGGA
AGTCAAGCCTATGAAGAATTTATTTCTGGATTGGCTTGGGRAGKAGAGCT
TGAATCCCATACGGGCTTTATGGCTGGTCTGRAGAAAAATAAATCAACCG
GCGAGACGKCTCCTTACTATGCCACATCTTTTATTGAAGTTATGTTCCAT
GTGGCAACTCGAATGCCTTCTTGTACAGAAGAGTCTCTTCTTCAGAAGAC
TCGTCATTTAGGGAACGATGAAATTCATATTGTTTGGTCGGAACATTACC
GAGATTATCGTCGTGGAATTCTTCCAACTGAATTTTGTGACGTTCTGATT
ATAATTTATCCCCTACCGAACAAACTTTTTCGAATCCAAATATCTCGGAA
GTTAGAGGTTCCATTTTTTGGACCTTTATTCAATGAATCAATTGTAGACG
GTAAAGCACTCCCAGGCCTTGTTCGTGCAACTGCCATCAATGCTTCTAGA
GCTAAACGCTCCATGATTCCTTATTTTCAGTCTCATTACGAAGAGAGAGC
CAAAGCCCTTGAGGACATAATCAAAAACCACAAGGAGAGTACTACCTATG
AGGAATTCATTACGAAGGTCTATAGTCCTCAAACTCTTCAGAATCTTTTT
CAGCCAAATAATCCTGTTCGGWCCTCTTTARCTCTTCAAGAATTGAGACC
TCGCTCCAAAACTGAAATTCAAATCAACCGTTATTCTTCCGTAAGTGAGA
CGGACCCTTTATATCAAAATGGAACCTCTCCTAAAAACATGAAGAAAATG
TCTTTTAAGAACGTTACTGGGAAAGTAAAGACAAGCGTCATAAAGGAAGA
AAATGATGATATTTTCCATTACGCAAAGAAAAAATAA back to top
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