EMLSAT00000005021, EMLSAT00000005021-700868 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005021
Unique NameEMLSAT00000005021-700868
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s260supercontigLSalAtl2s260:778754..779537 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005021 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005021EMLSAG00000005021-687787Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021968EMLSAE00000021968-730896Lepeophtheirus salmonisexon
EMLSAE00000021969EMLSAE00000021969-730897Lepeophtheirus salmonisexon
EMLSAE00000021970EMLSAE00000021970-730898Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779670auto779670Lepeophtheirus salmonispolypeptide
EMLSAP00000005021EMLSAP00000005021Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005021

>EMLSAP00000005021 ID=EMLSAP00000005021|Name=EMLSAP00000005021|organism=Lepeophtheirus salmonis|type=polypeptide|length=204bp
MLWIPCLLITNLIAVHGLTPKNAILLAXEEXSDFPEGDALCSLGNRYKKV
TKSSLQMSKRNALFKNAMNKLERVGRKTKNFEEEVKNLLSEKFRDDAPCS
STATSTCTSTDSKFRTIDGTCNNKENTSWGATGAPLIRLLKARYGNAAST
PKTKGLFTPRDAKCAQPGELPNPRLVSSTFHPDXECTSHSRYSHFDTIWP
IFGS
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mRNA from alignment at LSalAtl2s260:778754..779537-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005021-700868 ID=EMLSAT00000005021-700868|Name=EMLSAT00000005021|organism=Lepeophtheirus salmonis|type=mRNA|length=784bp|location=Sequence derived from alignment at LSalAtl2s260:778754..779537- (Lepeophtheirus salmonis)
ATGCTTTGGATTCCCTGTCTTCTTATAACCAACTTAATAGCTGTACATGG
CCTCACTCCAAAGAATGCAATCTTATTGGCGGYAGAAGAAKTCTCTGACT
TTCCAGAAGGCGATGCCCTTTGCTCTCTTGGGAATCGTTATAAGAAAGTA
ACGAAGAGGTAAGTACTTTTACCCAAGTTATAGTCTGAATGCATTGTCTA
TTTAGCATCAAACTAATTATATTTCAATCCTATTTTGATTTATATTTTAT
CCAGCTCCCTACAAATGTCAAAGAGAAATGCTCTTTTCAAGAATGCAATG
AACAAATTAGAGCGTGTGGGAAGGAAAACTAAGAATTTCGAAGAGGAAGT
CAAGAATCTTCTCTCTGAAAAATTTCGTGATGATGCTCCATGCTCCTCTA
CAGCAACCAGTACCTGCACCAGTACTGACTCCAAGTTCAGAACCATTGAT
GGCACCTGCAACAATAAGGAGAACACAAGTTGGGGTGCTACCGGTGCTCC
TTTGATTCGTTTATTGAAAGCTCGGTATGGAAATGCTGCTTCTACTCCAA
AAACAAAGGGTCTTTTTACACCAAGTAAGTACAACCGCCCAATTCATTCA
TCAATATGAATAGTATCATGATAGAATTTTTTCTCTAACATAAATAGGGG
ACGCAAAATGTGCCCAGCCAGGAGAACTCCCTAATCCAAGATTGGTCAGC
TCCACCTTTCACCCTGACNATGAATGTACCTCACACTCTCGCTACTCACA
TTTTGACACAATTTGGCCAATATTTGGATCATGA
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