EMLSAT00000005033, EMLSAT00000005033-700880 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005033
Unique NameEMLSAT00000005033-700880
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s261supercontigLSalAtl2s261:433616..435787 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005033 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005033EMLSAG00000005033-687799Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022017EMLSAE00000022017-730945Lepeophtheirus salmonisexon
EMLSAE00000022018EMLSAE00000022018-730946Lepeophtheirus salmonisexon
EMLSAE00000022019EMLSAE00000022019-730947Lepeophtheirus salmonisexon
EMLSAE00000022020EMLSAE00000022020-730948Lepeophtheirus salmonisexon
EMLSAE00000022021EMLSAE00000022021-730949Lepeophtheirus salmonisexon
EMLSAE00000022022EMLSAE00000022022-730950Lepeophtheirus salmonisexon
EMLSAE00000022023EMLSAE00000022023-730951Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777643auto777643Lepeophtheirus salmonispolypeptide
EMLSAP00000005033EMLSAP00000005033Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005033

>EMLSAP00000005033 ID=EMLSAP00000005033|Name=EMLSAP00000005033|organism=Lepeophtheirus salmonis|type=polypeptide|length=529bp
MYVVINKLKTSCCGFRIAKKNKKNLFLLFIXLCSEMVDLSQRVPSDTPLH
NDQIFHAHTSQFNSQSNNLIMPSHSSFYEFFSPEFPDLTSIRGDTSDNCN
SIFLHESNSGDLTFPSCSSPLVISEPLSQNSDSPEVLASVVVNELSSLSP
SYMNGRCQDDDILSKSVNIALLDNTHSSSGYYNQSYENGAYDIIHSSSNS
FDNDLHQCSRSQAPQTHGISYATLEAYNPQYENMSMDNPCWDNNNTSSIF
QSQEQENNYNIKSEESNGMRLLSSINTHSINGNDQKFMPNANIPIPAISS
TSSIVXSTTNSISSIEYSRSIYSDTDRDTSCISPTINDSSFNSDQSMSSS
PRNIEPLRKFASIRNKNSECVNCFTKTTSLWRRDGSGSSICNACGLYFKL
HGVDRPLQYRKDHIQTRKRKPNSAPKSKKKCANRAKAVTTKDPNQRKSHE
ASSTSIFRSPPPPPQNRQNYSQSPPQVVMTPLGLGLGFDPATINLSNLTL
PNRNYTRRRLRINDNLGGGGGGDKQSQKK
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mRNA from alignment at LSalAtl2s261:433616..435787-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005033-700880 ID=EMLSAT00000005033-700880|Name=EMLSAT00000005033|organism=Lepeophtheirus salmonis|type=mRNA|length=2172bp|location=Sequence derived from alignment at LSalAtl2s261:433616..435787- (Lepeophtheirus salmonis)
ATGTATGTAGTGATAAACAAATTGAAGACAAGTTGTTGTGGTTTTAGAAT
TGCAAAAAAAAACAAAAAAAACCTATTTTTATTATTTATAKCTCTTTGCA
GTGAAATGGTGGATCTATCACAAAGAGTTCCTTCCGATACACCTCTTCAC
AACGACCAAATCTTTCACGCTCATACATCTCAGTTTAACTCCCAAAGCAA
CAATCTAATAATGCCTTCTCATTCGTCATTTTATGAATTTTTCTCTCCAG
AGTTTCCAGATTTAACTTCGATTCGAGGTGACACCTCTGACAATGTAAGA
CTACTCATTGATATGAAAATGATTTGAAATTTATTAACAATTAATAAATT
ATTTACTACTTATAATTAGTGCAACTCCATCTTCCTTCACGAAAGTAATT
CTGGCGACTTGACCTTTCCATCCTGCTCATCACCACTTGTAATTTCAGAG
CCTCTGTCTCAGAATAGTGATTCTCCTGAAGTTCTAGCAAGTGTTGTGGT
CAACGAACTGTCCTCACTCTCTCCCTCTTATATGAATGGTAGATGTCAGG
ATGATGATATTCTATCGAAATCAGTTAATATAGCTTTATTAGATAATACT
CACTCCAGTAGTGGTTACTACAATCAGAGCTATGAAAATGGTGCTTACGA
TATAATTCATTCCTCATCCAATTCCTTTGATAACGATCTCCACCAATGTT
CAAGAAGTCAGGCTCCACAAACGTAAGTCTTGCCAGTTAATTAATTACAT
AAACTATACCTAGTGTTTATGTCCATTTTATACAGTCATGGTATTTCATA
TGCGACATTAGAAGCATATAATCCCCAGTATGAAAATATGAGCATGGACA
ATCCTTGTTGGGACAACAATAACACCAGTAGTATCTTTCAATCTCAAGAA
CAAGAGAACAACTACAATATCAAATCTGAAGAATGTAAGAAATATAATCA
GTATTACATCAAAAATAAATTAACTATTACAATATACAAAAATAATTGTT
TTAGCCAATGGAATGAGACTATTGAGCTCAATTAATACGCATTCTATTAA
CGGAAATGATCAGAAGTTTATGCCAAATGCAAATATTCCTATTCCTGCCA
TCTCATCTACCTCTTCTATAGTTKCCTCCACAACCAATTCCATTTCTTCA
ATGTAAGTTAACATTTCATCCAATTTAAAAAGTTTTGAATAAATTAATTT
CAAGGATTCCTTTATTATATCTTTTATAGAGAATATTCAAGAAGTATCTA
CTCTGATACTGATCGTGATACCAGTTGTATATCCCCAACAATTAACGATT
CATCATTCAATTCAGACCAATCCATGTCTTCCTCTCCACGGAATATTGAA
CCTCTTCGAAAGTTTGCTGTAATATAATTATTATGTCTTACCATAACGGA
TAATGAATAATTTGTTTATTCCTTTCTTTAGAGCATACGGAATAAAAATT
CCGAATGCGTTAATTGTTTTACAAAGACTACTTCATTATGGAGAAGGGAT
GGTAGTGGTTCCTCTATATGTAATGCTTGTGGACTATATTTCAAATTACA
TGGTGTTGATCGACCCCTTCAATACCGCAAAGATCATATACAAACACGTA
AAAGAAAACCAAATTCAGCTCCAAAATCAAAAAAGAAATGTGCCAACAGA
GCTAAAGGTGAGACTCTACTAAATAATTATATTTTTTTAAAGTTATCCTT
TGACTTCAACATTATACAATATATATATTATTTCGATATAGATACTTCTT
CGCCTTCTGCAGCTTATATTTAACTGTGATTAGCTTTAAATATTTCACCT
ACTCCTCCTCGACACATCCCCCTCCTTCTCCCTGTCTTTCTCGTTCCTTA
CTACTACTTATACACTTTCCATTTTTCAAATCTTATTGAAGCTGTCACCA
CCAAAGATCCTAATCAGCGTAAATCTCATGAGGCTTCTTCGACATCAATA
TTCCGATCCCCGCCTCCTCCGCCACAAAATCGTCAAAACTACTCTCAGTC
ACCACCACAAGTTGTTATGACTCCACTTGGCCTTGGTCTTGGATTCGATC
CTGCCACCATCAATTTGTCAAACTTGACCTTACCAAATCGAAATTATACT
AGAAGAAGACTGCGGATCAACGACAATCTTGGAGGTGGTGGTGGTGGGGA
TAAACAAAGTCAGAAAAAGTGA
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