EMLSAT00000005035, EMLSAT00000005035-700882 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005035
Unique NameEMLSAT00000005035-700882
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2628supercontigLSalAtl2s2628:842..2360 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005035 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005035EMLSAG00000005035-687801Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022027EMLSAE00000022027-730955Lepeophtheirus salmonisexon
EMLSAE00000022028EMLSAE00000022028-730956Lepeophtheirus salmonisexon
EMLSAE00000022029EMLSAE00000022029-730957Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768052auto768052Lepeophtheirus salmonispolypeptide
EMLSAP00000005035EMLSAP00000005035Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005035

>EMLSAP00000005035 ID=EMLSAP00000005035|Name=EMLSAP00000005035|organism=Lepeophtheirus salmonis|type=polypeptide|length=385bp
MNNSRCCCQSLNCEWKKASPSEEILQAQITSLSNTLSLYKQENVKFVDSL
VRYVKEKEDLERKLLRTEKIHEFRRVRALKKAEDIHKLHLAQELKKADET
YKSLLVQELKKAQTALELPRVRVLKEMEEIHTLRRVQELKKAEEAHQSLL
AQELKKAEEAHRSVLAQELEKAEEAHKSFLVQELKKAEDNYELRLVQELK
KAEETHKSLQAQEIKKAWRTHKSIRVRELKKAEKAHESLRALEQKRTLET
YESLQAELIKRAEETHKSLRIQMETEKRNYSKQLQAKDIEIKELLNACKP
QPLMEMKLXADEIYNLENSLQLLEDLRKSDEKRFSTTVHDLQTINFEKDK
IIIELRNELKRTSSKLDSTFLTHMLKQLNTDTRRN
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mRNA from alignment at LSalAtl2s2628:842..2360+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005035-700882 ID=EMLSAT00000005035-700882|Name=EMLSAT00000005035|organism=Lepeophtheirus salmonis|type=mRNA|length=1519bp|location=Sequence derived from alignment at LSalAtl2s2628:842..2360+ (Lepeophtheirus salmonis)
TTTAAAACAAGAATTTGAAGAAGGATCTTAAATTTCCACTCACGCTTATG
TACGAACATAGTTAAAACGTTTCTTCTTGGCTAGTTGATACCTTATGGTT
ATAGTCAATTTTGCTTTWCTTTACAATTTGTATCCTGTTAGTGTTATTAT
CGTGGCCTATTAAAAATTAATATCAAATATGAATAATAGCCGGTGCTGTT
GTCAGGTAATATAGGTTTTTGAAGGATATTCTTACCTCTAATAATTTATT
TCCAGTCTTTAAATTGTGAGTGGAAAAAAGCTTCCCCTTCCGAAGAAATA
CTACAAGCACAGATAACTTCATTATCAAATACCTTAAGTTTGTATAAGCA
GGAAAACGTAAAGTTTGTGGATTCTCTGGTTAGATATGTGAAGGAAAAGG
AAGATCTTGAACGGAAGCTCCTGAGAACTGAGAAGATCCATGAATTCCGT
CGTGTTCGAGCACTCAAAAAGGCTGAAGATATCCATAAATTGCATTTAGC
GCAAGAGCTCAAAAAAGCGGATGAGACCTATAAATCCCTTCTAGTTCAAG
AGCTTAAAAAAGCTCAAACAGCCCTTGAATTACCTCGTGTCCGAGTGCTC
AAAGAAATGGAAGAGATCCATACTTTACGTCGAGTTCAAGAGCTCAAAAA
AGCTGAAGAGGCTCATCAATCTCTTCTAGCTCAAGAGCTCAAAAAGGCTG
AAGAGGCTCATCGATCTGTTCTAGCTCAAGAGCTCGAAAAGGCTGAAGAG
GCTCATAAATCTTTTCTAGTTCAAGAGCTCAAAAAAGCTGAAGACAATTA
TGAATTACGTCTAGTTCAAGAACTCAAAAAAGCTGAAGAGACCCATAAAT
CCCTTCAGGCTCAAGAGATCAAAAAAGCTTGGAGGACTCATAAATCAATT
CGAGTTCGAGAGCTCAAAAAAGCTGAGAAGGCCCATGAATCTCTTCGAGC
TTTAGAGCAGAAAAGAACTTTGGAGACCTATGAATCCCTTCAAGCTGAAT
TGATCAAAAGAGCTGAGGAGACTCATAAATCCCTTCGAATTCAAATGGAA
ACTGAAAAAAGGAATTATAGCAAACAACTTCAAGCCAAAGACATCGAAAT
AAAAGAGCTATTAAACGGTATCTATTTTAGTACATGAAGTATTTTTTTCA
CCTCGAAAATGTTTAATGTTTCTCCTTTTGCATTTATTGCAGCTTGTAAG
CCTCAGCCATTGATGGAAATGAAGCTGSCAGCCGATGAAATATACAACTT
GGAAAATTCTTTGCAACTACTTGAGGATTTGAGAAAAAGTGATGAAAAAC
GTTTTTCAACAACTGTTCATGATCTTCAAACCATAAATTTTGAAAAAGAT
AAAATAATCATTGAGCTAAGGAATGAATTAAAGAGAACGTCTTCAAAATT
GGACAGCACTTTCCTTACTCACATGCTCAAGCAACTTAATACTGATACAA
GGAGAAACTAGTATTGTTATTTATGGAATATTTATTCATTTACTGTTATA
TAATAAAATACTTCTGAGA
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