EMLSAT00000005040, EMLSAT00000005040-700887 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005040
Unique NameEMLSAT00000005040-700887
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2632supercontigLSalAtl2s2632:9924..10762 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005040 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005040EMLSAG00000005040-687806Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022040EMLSAE00000022040-730968Lepeophtheirus salmonisexon
EMLSAE00000022041EMLSAE00000022041-730969Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768890auto768890Lepeophtheirus salmonispolypeptide
EMLSAP00000005040EMLSAP00000005040Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005040

>EMLSAP00000005040 ID=EMLSAP00000005040|Name=EMLSAP00000005040|organism=Lepeophtheirus salmonis|type=polypeptide|length=257bp
MTQIMFETFNMPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHCVPIYEG
YALPHAILRLDLAGRELTNYLMKILTERGYSFTTTAEREIVRDVKEKLCY
VALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRAPEALFQPSFLG
MESCGVHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEVT
ALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDECGPA
IVHRKCF
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mRNA from alignment at LSalAtl2s2632:9924..10762-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005040-700887 ID=EMLSAT00000005040-700887|Name=EMLSAT00000005040|organism=Lepeophtheirus salmonis|type=mRNA|length=839bp|location=Sequence derived from alignment at LSalAtl2s2632:9924..10762- (Lepeophtheirus salmonis)
ATGACTCAAATCATGTTTGAGACCTTCAACATGCCTGCCATGTATGTTGC
CATCCAAGCTGTCCTCTCCCTTTATGCCTCTGGTCGTACCACTGGTATTG
TCATGGACTCTGGAGATGGTGTTTCCCACTGTGTTCCCATCTATGAAGGT
TATGCTCTTCCCCATGCTATCCTCCGTTTGGACTTGGCTGGACGTGAATT
GACCAACTACTTGATGAAGATCCTCACAGAAAGAGGTTATTCCTTCACAA
CCACTGCTGAGCGTGAAATCGTTCGTGACGTCAAGGAGAAACTTTGCTAT
GTCGCTCTTGACTTCGAGCAAGAAATGGCAACCGCTGCTGCTTCCACCTC
CTTGGAAAAATCCTACGAATTGCCTGATGGTCAAGTCATCACTATTGGTA
ATGAACGTTTCCGTGCCCCTGAAGCCCTCTTCCAACCTTCCTTCTTGGGT
ATGGAATCCTGTGGTGTTCATGAAACTGTCTACAACTCCATCATGAAGTG
TGATGTTGACATCAGAAAGGACTTGTATGCCAACACTGTCATGTCTGGTG
GGACCACCATGTACCCTGGTAAGATGACCTATAAGTGTATAGACATATAC
ACCATACTAAATCATATCTCTTTTAATATTTAGGTATTGCTGATCGTATG
CAAAAGGAAGTTACTGCCCTAGCCCCATCCACCATCAAGATCAAAATCAT
TGCTCCACCAGAGAGAAAGTACTCCGTCTGGATTGGAGGATCCATCTTGG
CTTCCCTCTCCACCTTTCAACAGATGTGGATTTCCAAGCAAGAATACGAT
GAATGTGGCCCAGCCATCGTTCACAGAAAGTGCTTCTAA
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