EMLSAT00000005045, EMLSAT00000005045-700892 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005045
Unique NameEMLSAT00000005045-700892
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s263supercontigLSalAtl2s263:264796..267393 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005045 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005045EMLSAG00000005045-687811Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022058EMLSAE00000022058-730986Lepeophtheirus salmonisexon
EMLSAE00000022059EMLSAE00000022059-730987Lepeophtheirus salmonisexon
EMLSAE00000022060EMLSAE00000022060-730988Lepeophtheirus salmonisexon
EMLSAE00000022061EMLSAE00000022061-730989Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775549auto775549Lepeophtheirus salmonispolypeptide
EMLSAP00000005045EMLSAP00000005045Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005045

>EMLSAP00000005045 ID=EMLSAP00000005045|Name=EMLSAP00000005045|organism=Lepeophtheirus salmonis|type=polypeptide|length=736bp
MRFWKSLKSTGESLAGTLERTARKNSPKPNNHHHRESGGHLHLSPNTPXS
SRKVRAGSETSSGDPIYEDYYDYNNSLQSSGLTFVELIKRPGTHLGVIVS
GGIDTGLTPKIVDLIPGSWAQRSDVLCIGDVIVSVNGISTETMTQKDLVK
TLDXSDRIQLEVKYKLPSYRHRTHTRKITTKFIQITLKKENGSFGVVIRG
GNHDDPRRVRPFTVMYVTHKSVANKEGTLRVNDRILSINGAALRGMKLPE
LQSLLYRQDGDTVFTVEYDVAIHPDHELGRPILVEIRKEGSDILGFGLNK
CNDSGHVYIESVKQASLAERCGGIHVGDILLSVNGRAMSRNSDIDQISDL
IRGENNRLVQLEILPGIFSNARSSRCSIPSPTYSTLSSSHHKRSKSSSRY
PSGSSLGNGFQPSSTSPTPPKVTGKKVENMRRKFVAFTVELQRDGCTLGL
TLATEDDADIPAPIFISGLVENGLAERTKTIQINDQVMEINGTPIHDKSL
NEVIPLLQSSHEVIKLKLARLIAXPERDSSINGNTILRSNSVKLSRKPPL
PSPSPSPRSLSGINTVSLLTPLLSRSSPSPVPLRPIPMEVHKIILFKDKV
YEDFGFSVSDGLYDKGIYINRIRKGGPAHSCELLQPFDRILQINDTRTHE
FDCCLAVPLIAAAGDKIELLVTRSGGPLPEIKDYPYSNGSTKTLSEITIT
EEHTNNPSSLMGTLKKDDEILAXIXSKSEXNGQRSS
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mRNA from alignment at LSalAtl2s263:264796..267393-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005045-700892 ID=EMLSAT00000005045-700892|Name=EMLSAT00000005045|organism=Lepeophtheirus salmonis|type=mRNA|length=2598bp|location=Sequence derived from alignment at LSalAtl2s263:264796..267393- (Lepeophtheirus salmonis)
ATGAGATTTTGGAAGAGTTTAAAGTCAACGGGAGAAAGCCTTGCAGGCAC
CCTCGAAAGGACAGCTCGAAAAAACTCTCCTAAGCCCAATAACCACCATC
ACCGAGAAAGTGGAGGACATCTTCATCTCTCCCCCAACACACCTNGGAGT
AGTCGAAAAGTTCGTGCAGGCTCAGAAACATCCTCCGGCGATCCCATCTA
TGAGGACTATTACGACTATAATAACTCCTTGCAGAGTAGTGGTCTTACAT
TTGTAGAGCTTATTAAAAGACCTGGGACTCATTTGGGTGTGATTGTATCT
GGGGGGATTGATACGGGACTCACTCCGAAAATAGTGGATCTCATACCTGG
GAGTTGGGCGCAGAGAAGTGATGTTCTTTGTATTGGGGATGTTATTGTCT
CTGTGAATGGGATTAGTACAGAGACGATGACGCAAAAGGATCTGGTTAAA
ACATTGGATGMATCAGATCGTATTCAACTTGAGGTTAAATATAAATTGCC
TTCTTATAGGCATCGAACACACACGCGGAAAATTACAACCAAGTTTATTC
AAATCACACTTAAAAAGGAAAATGGAAGTTTCGGAGTCGTTATTAGGTAA
GGTGCTCCATCTTATGGATAAATATTTAGAATACATCTAAAACAGTTTAT
TGTATTAGGAAAAGGAAGAAAACATTCACTTCTTTTTTCTTTTTTTTTTG
GCAAATGAAATAATATTACAAAGACTGCCTCGTCTTCTAACACTTTATGC
ACTAAAATGATTTTATTTTCAACATTTGAACAACTGTGAACAAATTTATG
ATTATAGCATCCAAAATGTATTGTCTTATTTATTTATTTTCTTCACTAAA
GGGGAGGTAACCACGATGACCCACGACGTGTCCGACCTTTTACAGTCATG
TATGTTACCCACAAAAGCGTTGCCAATAAAGAGGGAACACTTCGTGTCAA
CGATCGAATTCTTTCAATCAATGGGGCCGCACTTAGAGGAATGAAGTTAC
CCGAGCTTCAAAGCCTTTTATATCGACAAGATGGTGACACCGTATTCACG
GTGGAGTACGATGTAGCTATTCATCCTGACCATGAGCTTGGACGTCCAAT
ATTGGTGGAAATACGGAAAGAGGGATCTGATATTTTAGGTTTTGGCCTTA
ATAAGTGTAATGACTCTGGTCATGTTTATATTGAAAGTGTAAAACAGGCA
AGTCTGGCCGAGCGGTGTGGAGGGATACATGTGGGTGACATATTATTGTC
TGTGAATGGAAGGGCCATGAGTCGGAATTCAGATATTGATCAAATATCAG
ATCTCATAAGAGGAGAAAACAATCGTTTGGTTCAATTGGAAATTTTACCA
GGTATATTTTCCAATGCTCGAAGTAGTAGATGTTCCATTCCCTCACCGAC
TTACTCAACCCTTTCATCAAGTCATCATAAAAGAAGCAAGAGTTCATCAC
GCTATCCGTCTGGAAGTAGTTTGGGAAATGGTTTCCAACCCAGCAGCACC
TCTCCTACACCTCCAAAAGTAACGGGTAAGAAAGTAGAGAACATGAGAAG
AAAATTTGTGGCCTTTACAGTTGAACTACAAAGAGATGGATGTACTTTGG
GGCTCACATTAGCCACAGAGGATGATGCTGATATTCCTGCTCCAATATTC
ATCTCAGGACTCGTTGAAAATGGATTGGCTGAACGAACAAAAACAATTCA
AATCAATGATCAGGTTATTTATATTTGACATCCGCATTTATGTACGGATC
TTCCTAATGTTTCTTTTATCATTGCATTTAGGTTATGGAAATCAATGGTA
CTCCCATTCACGACAAATCCCTTAATGAAGTAATTCCTCTCCTTCAGTCA
TCTCATGAAGTAATAAAGTTAAAGTTAGCGAGACTTATCGCTATKCCTGA
ACGAGACTCTTCAATAAATGGCAACACGATCTTAAGATCAAATTCTGTCA
AATTATCTAGAAAGCCACCTTTACCGAGTCCATCACCTAGCCCACGGAGC
CTTTCTGGCATTAATACTGTGTCTCTATTAACTCCACTACTTTCGAGATC
CAGTCCTAGTCCAGGTACTCCAGACTTTTGACTCAACATTTTAACGAAAA
TTGAAAAAACTGCATATTCTGATTTCAGTTCCTCTTCGTCCCATTCCGAT
GGAAGTTCATAAAATCATTCTATTCAAGGATAAAGTATATGAAGACTTTG
GTTTTAGTGTGTCTGATGGACTCTATGACAAAGGGATTTACATCAATCGT
ATTCGTAAAGGAGGCCCCGCTCATTCATGTGAGCTTCTCCAACCCTTTGA
TCGGATTTTACAAATCAATGACACTCGAACGCATGAGTTTGATTGTTGTT
TAGCAGTTCCTCTCATCGCAGCAGCCGGCGATAAAATTGAACTTTTAGTT
ACTCGAAGTGGAGGMCCTCTTCCAGAGATTAAGGACTACCCCTATTCTAA
TGGATCTACGAAAACTCTTTCTGAAATTACGATTACAGAAGAACATACTA
ATAATCCTTCGAGCTTGATGGGCACGCTAAAAAAAGATGACGAGATATTG
GCTTMGATTGYTAGCAAGTCCGAGGYTAATGGMCAACGATCATCGTAA
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