EMLSAT00000005048, EMLSAT00000005048-700895 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005048
Unique NameEMLSAT00000005048-700895
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s263supercontigLSalAtl2s263:310053..312596 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005048 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005048EMLSAG00000005048-687814Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022072EMLSAE00000022072-731000Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776227auto776227Lepeophtheirus salmonispolypeptide
EMLSAP00000005048EMLSAP00000005048Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005048

>EMLSAP00000005048 ID=EMLSAP00000005048|Name=EMLSAP00000005048|organism=Lepeophtheirus salmonis|type=polypeptide|length=847bp
MSYYEPHHTCSYNIMTLDELRLNSLRRRSEGIRNVDKAFDIAQIKIQEQV
EHRNSSLEARLLQLNELQSKVEDDTKRITGFKXKPREDLGFPQKISTDKA
RFKSEKPKEALKINGEKRIKKNIVEESKTFKKDKPKEPEVLKPKEPEDIN
SKKPEVVRPKEPEIVKATEPEVVKPKESKEDLPKEPEVVKPKEPKEDLPK
EPEVIKPMEPEVIKPKKPEVIQPKEPEVVKEKELELIEPKQPIEKNQNIE
QSEGSKTTHNVETGLKSSESTQEQKIEEPVTEERKKAPELIVIPVENDED
GKPDKINQILECNDVLDPTSKSMSPFEQNLVAFGQHFNFIPSPEPEKWES
SESEEEIQEEPEEVVEEELTPYKAALKKKYDEEVCTTKTASWGGDKPKGR
YDMSFLNVNQGEEIIHGNLFTQFKEWITAVKEEEIGDNALKSIKSHQNDP
VVEGAPKIDPHPAFKNRSDYIYIGEKNVMAKPHGDGELTFHNGDRFKGEF
LNGERHGYGALNVXPDDKLFHTVSSIEGTYVHDQLEGEAKIVHKNGDIRH
AFCSKGSLHGICKLFDKDYLIIEMGWYLSGEKEGQFWRFLTGGSYLVGGV
TETKKIGGDDVIYIYPDLKTCFKGTFVDEQMLLGQAXYVEVAMKKRXIFY
IKTTTPKGPKYKYDPSTRDRMCELDPLLPDPYEYNCIYIKQSRMKGAGDG
IFALKDLYRGEVVSFYNGIPMKSDELNAKSDEWEKNAYKIMNLLGKDQDG
KEGVIDIPEEYIALDKYKASLSHKANHSFEPNAKFTLFHHARFGLIPSLV
ITAEAVAHDKEITVSYDYAMDESPPWYQDLYTQNMMTLYQESKNFEG
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mRNA from alignment at LSalAtl2s263:310053..312596-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005048-700895 ID=EMLSAT00000005048-700895|Name=EMLSAT00000005048|organism=Lepeophtheirus salmonis|type=mRNA|length=2544bp|location=Sequence derived from alignment at LSalAtl2s263:310053..312596- (Lepeophtheirus salmonis)
ATGTCATATTATGAACCTCACCACACATGTAGCTATAATATAATGACACT GGATGAGCTGAGACTCAATTCTCTTCGTCGAAGAAGTGAGGGTATTCGTA ATGTGGATAAGGCATTTGACATTGCTCAAATTAAAATACAAGAACAGGTT GAACATAGAAACTCCAGTTTGGAAGCTCGTCTCTTGCAGCTGAATGAGCT GCAAAGTAAAGTTGAGGACGATACAAAGAGGATAACGGGCTTTAAAKCCA AACCAAGAGAGGATCTTGGGTTTCCACAAAAAATTTCTACTGATAAGGCA AGATTCAAGTCAGAAAAACCAAAGGAGGCACTTAAAATTAATGGAGAAAA AAGAATTAAAAAGAACATTGTGGAAGAATCCAAGACTTTCAAAAAGGATA AGCCAAAGGAACCGGAAGTCTTAAAACCAAAGGAACCTGAAGATATAAAT TCAAAGAAACCTGAAGTCGTAAGACCAAAGGAGCCAGAAATCGTGAAAGC AACAGAACCAGAAGTTGTAAAGCCAAAGGAGTCGAAAGAAGATTTGCCAA AGGAACCAGAAGTTGTAAAGCCAAAGGAGCCCAAAGAAGATTTGCCAAAG GAACCAGAAGTCATTAAGCCAATGGAACCAGAAGTCATTAAGCCAAAGAA ACCAGAAGTCATTCAACCAAAAGAACCTGAAGTTGTAAAGGAAAAGGAAC TAGAATTGATTGAACCTAAGCAACCTATAGAAAAAAATCAAAACATTGAG CAGTCTGAAGGTTCCAAGACAACACACAATGTTGAAACAGGGCTTAAAAG TTCTGAAAGCACTCAAGAACAGAAAATTGAAGAACCAGTAACAGAAGAGA GGAAAAAAGCTCCAGAGTTGATCGTCATTCCTGTTGAGAATGATGAGGAT GGAAAACCAGATAAGATCAACCAAATTTTAGAATGCAATGATGTTTTAGA TCCCACTTCTAAATCTATGTCTCCATTTGAACAGAACCTTGTTGCTTTCG GACAACATTTTAATTTTATTCCTAGTCCGGAACCTGAGAAATGGGAATCT TCAGAGTCTGAGGAAGAGATTCAAGAGGAACCGGAAGAAGTAGTGGAGGA AGAGTTGACACCTTATAAAGCTGCTCTTAAAAAGAAATACGATGAGGAGG TATGCACCACAAAAACAGCTTCTTGGGGAGGTGATAAGCCAAAAGGGAGA TATGACATGTCCTTCTTGAACGTGAATCAAGGCGAAGAAATTATTCATGG AAATTTATTCACACAGTTCAAGGAATGGATCACGGCTGTGAAAGAGGAGG AGATCGGAGATAATGCTTTAAAGAGTATTAAATCTCATCAAAATGATCCC GTAGTTGAAGGAGCTCCTAAAATTGATCCTCATCCAGCTTTCAAGAACAG ATCAGATTATATTTATATTGGAGAAAAAAATGTCATGGCCAAGCCTCATG GAGATGGAGAACTTACTTTCCATAATGGGGACAGATTTAAAGGAGAATTC CTCAACGGAGAAAGACATGGCTATGGAGCTCTCAATGTGKCTCCAGACGA TAAATTATTTCACACTGTCTCTTCCATCGAAGGTACCTATGTTCACGATC AACTTGAAGGTGAAGCAAAAATTGTACACAAGAACGGTGATATCAGGCAC GCATTCTGCTCAAAGGGATCCCTTCATGGTATCTGTAAATTATTTGACAA GGATTACCTTATCATTGAAATGGGATGGTATTTGAGTGGTGAGAAGGAAG GGCAGTTTTGGCGTTTCTTAACCGGTGGATCTTATCTCGTAGGAGGTGTT ACAGAGACAAAAAAAATCGGAGGAGATGATGTTATTTACATTTATCCGGA TTTGAAAACTTGCTTCAAAGGAACTTTTGTCGATGAACAAATGCTTCTGG GACAGGCTTKCTATGTCGAAGTTGCCATGAAAAAGAGGGRTATTTTCTAT ATAAAGACCACAACTCCCAAAGGACCCAAATACAAATATGATCCGTCCAC CAGGGATCGAATGTGCGAATTGGATCCCCTTCTACCCGATCCTTATGAGT ACAATTGCATATATATAAAGCAATCGCGAATGAAAGGAGCAGGAGATGGG ATTTTTGCTCTGAAAGATTTATATAGAGGAGAAGTGGTCAGTTTTTATAA TGGTATTCCTATGAAGTCAGATGAGCTAAATGCCAAAAGTGATGAATGGG AAAAAAATGCGTACAAAATCATGAACCTTCTTGGAAAAGATCAGGACGGG AAAGAGGGAGTCATTGATATTCCAGAAGAGTATATTGCTCTAGATAAGTA CAAAGCCAGTCTGAGTCACAAGGCAAATCATAGTTTTGAACCAAATGCCA AATTTACTTTATTTCACCATGCTCGTTTTGGATTGATTCCTAGTTTAGTT ATCACAGCTGAGGCAGTTGCACATGATAAAGAGATCACTGTTAGTTACGA CTATGCCATGGATGAGTCCCCTCCATGGTATCAAGATCTATACACACAAA ATATGATGACTTTGTATCAAGAATCCAAGAACTTTGAAGGGTAA
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