EMLSAT00000005055, EMLSAT00000005055-700902 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000005055
Unique Name	EMLSAT00000005055-700902
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s263	supercontig	LSalAtl2s263:542170..547024 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000005055 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000005055	EMLSAG00000005055-687821	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000022090	EMLSAE00000022090-731018	Lepeophtheirus salmonis	exon
EMLSAE00000022091	EMLSAE00000022091-731019	Lepeophtheirus salmonis	exon
EMLSAE00000022092	EMLSAE00000022092-731020	Lepeophtheirus salmonis	exon
EMLSAE00000022093	EMLSAE00000022093-731021	Lepeophtheirus salmonis	exon
EMLSAE00000022094	EMLSAE00000022094-731022	Lepeophtheirus salmonis	exon
EMLSAE00000022095	EMLSAE00000022095-731023	Lepeophtheirus salmonis	exon
EMLSAE00000022096	EMLSAE00000022096-731024	Lepeophtheirus salmonis	exon
EMLSAE00000022097	EMLSAE00000022097-731025	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto778495	auto778495	Lepeophtheirus salmonis	polypeptide
EMLSAP00000005055	EMLSAP00000005055	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s263:542170..547024-

protein sequence of EMLSAP00000005055

>EMLSAP00000005055 ID=EMLSAP00000005055|Name=EMLSAP00000005055|organism=Lepeophtheirus salmonis|type=polypeptide|length=558bp
MANWGYDECNGPEKWGESFPIGKDGARQSPVAIDTSKVQVMPEFTELKFK
YVPDNTKDIENTGSSWKVNINGTGSSLTGGPLKDNHELWQYHAHWGSDNA
KGSEHRVDGKMFSAELHLVHWNTKYPSPEVAADKEDGLAVLGMFIQVGEK
HEEFQKVVDSLQKIKFKGEKTVLASSVDPTKFLPKSKDFWTYEGSLTTPP
LYESVTWIVFREPIQLSEEQGKTMDSYYKSALILVTILSLSWANEFFDLL
FQEWSEWKLTHGKTYLDSTEERWRFKIYRENRAKIVKHNIGAHKGHHSYF
LEMNHFGDLFSHEFTAAVNGYNSTSKQRIPGATFIPPSNTNLPDQMDXRE
KGAVTPVKDQGQCGSCWSFSATGALEGQEFRKSGKLISMSEQNLIDCSKS
YGNGGCNGGLMDMAFRYVRDFGIDSETFYPYEAVDDDCRFNKTQEVTTDH
GYVDVKSGSESXLVKAIATIGPISVAIDASHESLQFYSHGIYDERECSST
ELDHGVLAVGYGADENGKKYYIVKNSWSEKWGNKGYFLLARDDEXRCGIA
SQASYPLV

mRNA from alignment at LSalAtl2s263:542170..547024-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000005055-700902 ID=EMLSAT00000005055-700902|Name=EMLSAT00000005055|organism=Lepeophtheirus salmonis|type=mRNA|length=4855bp|location=Sequence derived from alignment at LSalAtl2s263:542170..547024- (Lepeophtheirus salmonis)
ATGGCAAACTGGGGTTATGATGAATGCAATGGTGAGTTACTTCTCTTCAT
TTCCTATTAATTCCTCATAATCAAACATAAGTAATTAATAAGAAAAGTCC
ATCTTTTTAAGGGTAAATTCGGGACTCTGATCGCCCTTTGATTTTAATCA
TTATATATTTTAATCTCCTTTAATGATTTAGCACAAATATATTGACTATT
ACACAAATCTTGGGAAAATTGGTGGGTTTTTTTTCTTGTTCTGGATCTGA
TAAGTAAATTATTTATTAATGCTAATTATAACTATGTTTTGATAAATTAT
TTATTAATTTCATGCTAATTGTAATTATGCTTTGTTGAATTATTTATTTA
TGCTAATTGTAACTATGCTTTGATAAATTATTATTTATTGTAATCATTAT
ATATTTTCATCTTAATTAATGATTTACCACAAATATATTAGCTATTAAAT
CATTCTTGGGAGAATTGCTGGGGTTTTTTTTCTTGTTCTGGATCTGATAA
GTAAATTATTTATTAATGTGAATTGTGTTTCGATGAATGTTTAATTAAGG
ATCAGAAATCCAAAACCCTTAGAAACTCTTGTTTGGATCCCAAATTTTGA
TATAAAAAAATGATTTTCTTATTTACAATGGTTCAAAGGCCATATTTGGG
ATATTTCAACTAAGGCGAGGCAATTCAAGGGTGTTTCTATGAAAATTATT
TAAAATCTCCGGAGCATTTTCCAATCTGATTACCCCTCTAACTAGGGCCA
TGCAATGTTTTGACTCTTCTTTTACGAATAAAATCCTCTAAAATATATAA
TATTTTTAGAAAATGTTCTAAAAAGTGTGTTATGTCCTCTTTTATCAATT
AAAATATACAACTTAAGCTGTTCCCGAGTTCAAGTTGATGTTAATTTTGT
CTTTATTTCTTAAGAGAAGAAAATTTATGTTGTAAATTATTTTTGTTTCG
TATCCTAATCTTCATGTAAAAAACATTCTTTGACGAATACTTTTCGTCCA
GTAATAGCAGTACTTATTTCTGGTCGGATGTATCAGTTTAATAAGACTTA
TGTGGGACTCGGATCGGTGTGAGCCTGAATATTCAGTTTTGATGCATTCG
TAATCAAAATTAAAATTCAATCATTTTAAAATGGCAATCATTACCTAATA
ACTTGAATTTACTTTTACATATTTATGTGCCTCAAGGCTCGAGTCTTTAT
TCAAATCTGAAGTCCTTAACTTTTAATCCTATTTAAATCTGAGTTCGTAG
TTTAATTAGACTAAATTGCAACTCATGTTCAAGCTGTGGATACGTGTTCC
CAGCTGAGCTATTAGTACTTAAGCAATTAAATTTAGGTCTATTTAAGAAA
TTGAGTAACTGCCAAAAAATGTTTGCATATAATTAAATAAAATGTAGTTT
TAAAGTGTCACTGAATACAAAACCCGAATATTTAACTATTTAATTATAAG
TTGGTAAAATAGCAATTTTAATACGTCAAGATATCGTATGAAACGTGGCC
TAATCACTTGATATATTTATAGTGTATTTTGATCGTTAATAAGCATGGTT
GGGGGGGGGCATMCCTTCCCCCCCCCCCCACCAACCATGCTTATTAACGA
TTAATCATTCTTTATTTTTAATAGATATTTATATACTTACCTTTCATTAC
CTAGAATTTATCCCAAAATTATAAATAAAATTCATCCCCCATCAGGGAAT
TCTCATTTGATAAGAAAAAAATAATCTTTTGAACTCATCCAATTAAAACC
TAAAGTAATTTATAGAGATAATTTATTCACTAATTTATTTCTTAATTATA
TTAATCATTCTATATATGATTTTCTATTTCATATGATCATTCTATTGTAT
TCTAAATATGCGCAACAATTTATGTATCACAAAACCTCAATTATATTTAA
TGGGATGATTTCGTGAATCCTGACGACATTGAATGTTTGATGTATTGAAT
CTTTACTTCATGTAATATTATAGTTAAGACTGTATTATTGCAATTGTTGG
TTGTAGTTAGTTGAAATACTCGGATCTTTSAAAATAGTTAGTAGGAAAAA
TAATAAATTTCTTAGTAACAATAATATAATAACTAAATTCTATTGGGAAT
TGAAACCCATTGAATAAACTTACTCTTTTGATACTTTTTTATAGTGGATA
TTAAACTATAATATTGTCTTTAAAAAATTCCCCAAACTGGAGTTAGGATA
GTGTCAACTTCTTCTATAGCCAAATACTTTCATTATTACAGGTCCGGAAA
AGTGGGGTGAATCATTTCCCATTGGCAAGGATGGTGCTCGCCAATCTCCC
GTCGCAATTGATACTTCTAAAGTTCAAGTGATGCCAGAATTCACAGAATT
AAAGTTCAAGTATGTTCCTGACAATACGAAGGATATTGAAAACACGGGAT
CAAGCTGGAAAGTTAATATAAACGGAACAGGTTCATGTAAGTTTTACCAA
TCTGTTCATTAATTTTGGACCATTACAGCTGATATTAATCGTCTTATTAC
TTATATTATTTAGCGTTGACTGGAGGACCACTCAAGGATAACCATGAATT
ATGGCAGTATCACGCACATTGGGGATCTGATAACGCTAAAGGATCGGAAC
ATCGTGTTGATGGTAAAATGTTTTCTGCTGAGGTAAAATGTGATCCTTTT
TATGTATGATTATGCAATATTTAAAAAATATTTTTAGCTCCATTTAGTCC
ATTGGAATACAAAATATCCATCTCCTGAAGTCGCTGCTGATAAAGAAGAC
GGATTAGCAGTTTTAGGAATGTTCATTCAGGTATAAACATTCGCCCATCT
AAATATAACATACGATATTAATAACTGTGTGCTCTTAAACCTTAGGTCGG
AGAAAAACACGAAGAATTTCAAAAGGTTGTAGACTCTCTACAAAAAATTA
AATTCAAAGGAGAAAAAACTGTTTTGGCATCTTCTGTTGATCCTACAAAG
TTTTTACCTAAGTCCAAAGACTTTTGGACCTATGAAGGATCTCTAACTAC
TCCCCCACTTTATGAAAGTGTTACTTGGATTGTTTTCAGGGAACCTATCC
AACTATCAGAAGAGCAGGTAACCCTAACTACAGTAGCGATATCTGATTTG
AAACAATATACAACATATTACATCCCCCATTTAGATTACTGCCATGAGAA
ATATTGCATTTTGTTGTAAAGATGTTGAGGATGGAGAAAAGAAGCATGCT
ATGGTCAATAACTTCCGCCCTCCTGTTCCTCTTGGATCCAGAGTCATTCA
AGGAAACAAATAAAATAGTGGTTTTGAACAAACATAACTTTTAAAAAAAA
ATATTTATTTTGTTTGAAGCACGTTTATATATTAATTATATCATTAGATA
CATTTAGGTTTTTTTTTTTGCTTTTATCCAGTTTAAATTGTAAAATCCCT
GTGATAGTTGTAATGATTAAATATACCAATTAGTTAGCTTCAAACTAAGA
AATCCACTATTCATTAAAAGTCTAAAACAGATGTGGTCTTAGAAACTTTA
TGCTAAAGAAGTAATTAGAAATTCAATCCCTCAGCTTTTTTGAGATTGAT
CTTCACTTGCGCATCATTCCTTTGTATGGTTTCTTCAACATGTGTAGATG
AAAGAAGAGAAGGAGGGAGAGGGTTGACATTTAGATTTCCTGAAGTGTAC
TGAAGATAGATATAATATTAACTTGATTTCAGTGGAGAATATCATTCGAT
TCAGTTTCTTTGAAAGGGAAAGACTATGGATTCGTATTATAAGAGTGCGC
TAATTTTAGTCACTATTCTTTCTTTGTCTTGGGCCAATGAATTCTTTGAC
CTATTATTCCAAGAGTGGAGTGAGTGGAAGCTTACACATGGAAAAACTTA
TCTGGATTCCACCGAAGAAAGATGGAGATTTAAGATATACAGAGAGAACA
GGGCCAAAATTGTTAAGCATAATATCGGAGCTCACAAGGGGCATCACTCT
TACTTCCTAGAAATGAACCATTTCGGAGATCTTGTAAGATCAATTAAATG
CTATGAATGAGAGGATTTTTTAATTAATTATTTCTAATGTTTTAGTTTTC
TCATGAATTTACTGCAGCAGTGAATGGGTATAATTCTACCTCTAAACAGC
GAATCCCAGGAGCAACATTCATTCCTCCATCCAATACTAATCTTCCTGAT
CAAATGGACKGGAGAGAAAAGGGAGCCGTTACTCCTGTGAAAGATCAAGG
CCAATGTGGTTCTTGCTGGTCCTTTTCAGCGGTAATTAATTCTAATTTAT
GAACCTATCTCAAGACTCATTTTTGTGTATATCATAATTAGACAGGAGCT
TTGGAAGGCCAAGAATTCCGCAAGTCTGGTAAGCTCATCTCAATGAGTGA
ACAGAATCTAATTGATTGTTCAAAATCATATGGTAACGGAGGATGCAATG
GAGGTCTTATGGATATGGCATTTCGATACGTTCGTGATTTTGGGATCGAC
TCAGAAACGTTTTATCCTTATGAGGCAGTAGATGATGATTGTAGGTTTAA
TAAAACGCAAGAAGTTACTACTGATCATGGATACGTGGATGTTAAAAGTG
GTAGCGAATCAGMCCTCGTAAAAGCAATCGCCACTATTGGACCAATCTCT
GTTGCCATTGATGCTTCTCATGAAAGTCTACAATTCTACTCGCATGGAAT
TTATGACGAACGTGAGTGTAGCTCAACGGAACTCGATCACGGCGTTCTAG
CTGTTGGTTACGGAGCAGACGAAAATGGGAAAAAGTATTACATTGTCAAG
AACTCTTGGAGTGAAAAATGGGGGAATAAAGGTTACTTTTTACTTGCCAG
AGACGATGAAAAKAGATGCGGGATTGCTTCTCAAGCATCTTATCCACTTG
TATAA

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