EMLSAT00000005111, EMLSAT00000005111-700958 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005111
Unique NameEMLSAT00000005111-700958
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s26supercontigLSalAtl2s26:918032..918799 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005111 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005111EMLSAG00000005111-687877Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022330EMLSAE00000022330-731258Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780072auto780072Lepeophtheirus salmonispolypeptide
EMLSAP00000005111EMLSAP00000005111Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005111

>EMLSAP00000005111 ID=EMLSAP00000005111|Name=EMLSAP00000005111|organism=Lepeophtheirus salmonis|type=polypeptide|length=255bp
MSGRDYDHLFKLLIIGDSGVGKSSLLLRFADNSFTGNYITTIGVDFKIRT
LEVNGERVKLQIWDTAGQERFRTXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXITATYYRGTHGVIVVYDVSNGESFANVKRWLHEIDQNCSSEVVSR
XLVGNKNDGDTAKKVVLTEDAKRFSDQMGIRLFETSAKENFNVEEMFKSL
TELVLKSKKEAALSESSYPYGNGASSGGVAGGIKIGGKSRPGHKSQTQKR
SGCCK
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mRNA from alignment at LSalAtl2s26:918032..918799-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005111-700958 ID=EMLSAT00000005111-700958|Name=EMLSAT00000005111|organism=Lepeophtheirus salmonis|type=mRNA|length=768bp|location=Sequence derived from alignment at LSalAtl2s26:918032..918799- (Lepeophtheirus salmonis)
ATGTCTGGACGTGATTATGATCATTTGTTCAAGCTCTTGATCATCGGAGA
CTCTGGAGTGGGGAAGAGTTCGCTCCTCCTGCGCTTTGCAGACAATTCCT
TCACTGGAAATTACATAACAACAATCGGTGTGGACTTTAAGATTCGTACT
CTGGAAGTGAATGGAGAGCGAGTCAAGCTACAGATCTGGGACACCGCGGG
ACAAGAGCGATTTCGGACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNATCACAGCCACCTATTACAGAGGGACGCACGGAGT
GATTGTCGTGTACGATGTCTCCAATGGAGAATCCTTTGCCAACGTCAAGC
GTTGGCTCCACGAAATCGATCAGAACTGCTCGTCTGAAGTCGTGTCTCGA
GMCCTTGTAGGGAACAAAAACGATGGAGACACAGCCAAAAAAGTTGTGCT
CACAGAAGACGCTAAACGATTCAGTGATCAAATGGGGATACGGCTCTTTG
AAACGAGTGCGAAGGAGAACTTTAATGTGGAGGAAATGTTTAAATCCCTC
ACGGAACTCGTTCTCAAATCCAAAAAAGAGGCTGCACTCTCGGAAAGTTC
GTATCCTTATGGCAATGGGGCCTCGAGTGGAGGMGTAGCTGGGGGMATTA
AAATTGGTGGCAAGTCTAGGCCCGGCCACAAATCGCAAACACAAAAAAGG
TCCGGCTGCTGCAAATAA
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