EMLSAT00000005113, EMLSAT00000005113-700960 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005113
Unique NameEMLSAT00000005113-700960
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s26supercontigLSalAtl2s26:142964..143594 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005113 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005113EMLSAG00000005113-687879Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022333EMLSAE00000022333-731261Lepeophtheirus salmonisexon
EMLSAE00000022334EMLSAE00000022334-731262Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773176auto773176Lepeophtheirus salmonispolypeptide
EMLSAP00000005113EMLSAP00000005113Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005113

>EMLSAP00000005113 ID=EMLSAP00000005113|Name=EMLSAP00000005113|organism=Lepeophtheirus salmonis|type=polypeptide|length=133bp
MKILLAFSALIALTSAQGYHPTPSYEQPAHYAYNYGVVDDYSGNNFGQSE
SRDGYVTSGEYHVQLPDGRLQTVNYHVGDAYTGYVADVTYSGTPSYGPAP
IHHTPIPIHHHAAPIPHHPLPLHHQTGPFFHHF
back to top

mRNA from alignment at LSalAtl2s26:142964..143594+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005113-700960 ID=EMLSAT00000005113-700960|Name=EMLSAT00000005113|organism=Lepeophtheirus salmonis|type=mRNA|length=631bp|location=Sequence derived from alignment at LSalAtl2s26:142964..143594+ (Lepeophtheirus salmonis)
TACGACTCCAATTCATTTCAAACATATCACCCAAACATGAAGGTAATTTA
ATCATTCAACATTAATTCAGATTACCTATTTACTTCTTTTCTATCAGATC
CTCCTCGCCTTCTCAGCACTTATTGCCCTCACCTCTGCTCAAGGATATCA
TCCTACACCCTCTTATGAACAACCTGCTCACTATGCCTACAACTATGGAG
TAGTGGATGACTACTCTGGAAACAACTTTGGACAATCCGAGTCCCGTGAT
GGTTATGTCACTTCTGGAGAATACCATGTTCAATTACCCGATGGTCGTCT
TCAAACCGTCAACTATCACGTAGGAGATGCTTACACTGGTTATGTGGCGG
ATGTCACCTACAGTGGAACCCCTTCCTATGGCCCAGCGCCGATTCACCAC
ACTCCCATCCCTATCCACCACCATGCAGCTCCCATTCCTCACCATCCCCT
TCCTCTTCATCACCAAACAGGTCCTTTTTTTCATCACTTTTAAATTATTT
ATTTCTTGTAAACTTAATTTATTGTGACAATAAATTGTTGAAAACTATAC
TTGCATTGGTAAGACTTTATAAATAAAATGTTAAAATTATCATTTCAATA
TACATACGAGGTTTGTTTGAAAAGTTCCCGA
back to top
Add to Basket