EMLSAT00000005125, EMLSAT00000005125-700972 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005125
Unique NameEMLSAT00000005125-700972
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s270supercontigLSalAtl2s270:347614..349107 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005125 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005125EMLSAG00000005125-687891Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022376EMLSAE00000022376-731304Lepeophtheirus salmonisexon
EMLSAE00000022377EMLSAE00000022377-731305Lepeophtheirus salmonisexon
EMLSAE00000022378EMLSAE00000022378-731306Lepeophtheirus salmonisexon
EMLSAE00000022379EMLSAE00000022379-731307Lepeophtheirus salmonisexon
EMLSAE00000022380EMLSAE00000022380-731308Lepeophtheirus salmonisexon
EMLSAE00000022381EMLSAE00000022381-731309Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776667auto776667Lepeophtheirus salmonispolypeptide
EMLSAP00000005125EMLSAP00000005125Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005125

>EMLSAP00000005125 ID=EMLSAP00000005125|Name=EMLSAP00000005125|organism=Lepeophtheirus salmonis|type=polypeptide|length=324bp
MKLVITSLLITLCFIPKFIHALDKSTVDKILEDLKSTIGSAEEDGVKFLI
PGIVRMVFHDCADGCDACLNLDHPANVGIERTLNSLEPVYESYRDSISRA
DLWALASKAAFEMSVDINNERCQEESCKTPKVNIRFKFGRTDCSTSPRHS
QNMVIPSPFDTSDTLMPWFKETFGFKPNEVVAIMGLHTLGKAGSPFNRAW
ENDNKDGLSNFYYKKISDPNHCWVQEYIDPELSGAPNKLFFWRTGEFKGF
ALPIDMTLFKDIQVESTKTGESSCTYYDCNKASTAGMFKRYANDIKNWTK
HIERLYSRIIEKTSDNLKNVRKNK
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mRNA from alignment at LSalAtl2s270:347614..349107+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005125-700972 ID=EMLSAT00000005125-700972|Name=EMLSAT00000005125|organism=Lepeophtheirus salmonis|type=mRNA|length=1494bp|location=Sequence derived from alignment at LSalAtl2s270:347614..349107+ (Lepeophtheirus salmonis)
CTTTAATGGAATATATTCACACCTTTTCCTAACACTAGCCTCCTATAAAA AATGCAATCAACTCCCTTAGAAGCATCATTGAACAAACAACAATGAAATT AGTTATAACCTCACTTTTGATCACCCTTTGCTTTATACCCAAATTTATCC ATGCATTGGATAAATCCACTGTGGATAAAATCTTGGAGGACTTGAAAAGT ACCATTGGATCAGCGGAAGAAGATGGAGTAAGCTCTTTTTCACGTCTATC TTGTAACGAATCAATATAACCCTTCATTTTCCCACCTATGAACATTGNNA CATATAGGTCAAATTTTTGATCCCTGGAATTGTTCGCATGGTATTTCACG ACTGTGCTGATGGATGTGACGCTTGTTTGAATTTGGATCATCCTGCAAAT GTAGGAATCGAACGAACACTCAATTCACTTGAGCCTGTATATGAAAGTTA TAGAGACTCAATTAGTAGAGCTGATTTATGGGCACTTGCTTCCAAAGCAG CTTTTGAAATGTCGGTTGATATTAACAATGAAAGATGTCAGGAAGAAAGG TATCTATGAAAAATAAAGACCGATTATGTAGGTACTAAAATAATATCCAA TATAAAAATCCAAAGCTGCAAGACTCCAAAAGTGAACATTCGTTTCAAAT TTGGTCGCACAGATTGTTCCACTAGTCCAAGACATTCTCAAAATATGGTT ATTCCCTCTCCATTTGATACTTCTGACACTTTAATGCCTTGGTTCAAAGA AACCTTCGGGTAAGTCAATAATTTTAATTCAACATTTTTATGTTTCTATT TCCCTTTGGATGAATGTCTACATAGATTCAAACCTAATGAGGTTGTTGCC ATAATGGGATTACATACATTGGGAAAAGCGGGTAGCCCCTTTAATAGAGC ATGGGAAAACGATAACAAAGATGGTTTGAGTAACTTTTACTATAAAAAAA TCTCAGATCCAAATCATTGTTGGGTTCAAGAGGTGAGTGAGTGAGTGAGT GAGCACTGAGGTCAGATCTTTAATTTTTCTATCATTATTTCATCAGTACA TTGATCCCGAATTGTCTGGAGCACCAAACAAGCTTTTCTTTTGGAGGACT GGAGAGTTCAAGGGCTTTGCTCTTCCCATTGATATGACTCTCTTTAAAGA TATTCAGGTTGAGTCAACTAAGACGGGAGAATCAAGTTGCACCTACTATG ACTGTAACAAGGCCTCAACTGCTGGAATGTTCAAGCGCTATGCCAACGAT ATTAAAAAGTGAGTAAAACATATTACATACTTTCTGAATAGATTTTCTTA TTCCTTATAATCCTCTTCCTTTTAGTTGGACCAAACACATTGAAAGATTA TATTCTCGTATCATCGAAAAGACTTCTGATAATCTTAAAAATGTTCGGAA AAATAAATAATCCTTAATGAAATGTTAGTAGTTAAGCTATTTCATGAATA AATAATATTAAGCATTCTATTTCAAATGTTTTATTGTTTATAAA
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