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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s272 | supercontig | LSalAtl2s272:219557..223858 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000005156 >EMLSAP00000005156 ID=EMLSAP00000005156|Name=EMLSAP00000005156|organism=Lepeophtheirus salmonis|type=polypeptide|length=1155bp
MPMNWRFIFFILLYYFESTIGDECPKGWIKSRRNVCSFGLYNIAINYTSA
LRYCREIHNAGIGDFEDMDELEMMSLHIQTESFIRSSPWMNKVHDLRKVE
EGKECTVLTKKGSLSRIDCSQKRGVICSKWNAECPSSDYVNIDNQCYTSI
QNPKQYKDAMGFCTALYNGGTILPIIKTSTQNSLIAERFGSVRRWIGLRM
RPDKGYFQWSDGSILEENDYSNWSGDGKPPNVEDYQNIVCIVMGEGGLWF
IEPCDVEKEFLCQLNPYDTVPPNCKSNHDLKWIEDPHNGLCYTVMHSLLK
GENAETSCRYLSIGSNTGTLVSIINPLQQRFFESHLPNDGYSGTYWVGLR
NVEGTFTWLDGSPYGFMNWEDQPSYERNHECVNMVMRGGSGKWRTEDCEE
RLXYICQVKGFNYVDPPEPPSMNNCPIGWIRGGSQCFYTSEKKLKFEEAN
QFCISKNKESTLAILRDPKAIEEMKGTVHNHSYFIGLNDIKTEGNYVWLD
GITDKKEEIPWAPHQPDDKNSSQNCIVMDSSVETWNDVSCNEENRFFCSM
EYTVCPPHWTLYNNRCFYLSKESVQCEEGERQCKAESSQASLASIHSSHE
NDFLKHLNPITTIDIWIGLKKKSNEESFENWSDGTSIDFTNFSDRDASID
DDQCVRLNTNGYWFPEDANKNNFYSCSLEITHYMNCPWGWKKSRESCYFF
MDEELTFQEALHKCDDIHGYLVTIPREEAQDFIYSEFKKTGLEAPWVGLS
TSKTSNFFLWSDESPTTYTNWNTNFPKPLEGTSCVLMNFQNEGKWENVDC
DHKLQAVCETPIQISDLPPSSDAGCTEDQMGYESFCYEIFKSKENYYNGK
LHCTNLGGHFITIENEVIQNKLIPFISNSGSNFFIALKYVGGNWVWDYYE
TPLRDFAYWAPNEPNLEIDDPEGICVEMISRDHFLGKWKTVGCSRKNEVL
CQFSRKGHTPKPPTTKETQQPTMDPSFKCPPSYQMIRNKCYKFFNKSYKN
FEMARQDCGIYGGDLASFQSLEEEMEVNRYFVDFGLPKTFIGLAEISGLS
GFRWLNSFITYGTYTNWGPFEPKCPNYDNNCVFIMNTQWSCGSCQLELNY
FCQVNPSDQDFTSNTPSQTXPPQPQCSPGVDDGWFVIPHHDSNVCYKFSK
EEKMN back to topmRNA from alignment at LSalAtl2s272:219557..223858- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000005156-701003 ID=EMLSAT00000005156-701003|Name=EMLSAT00000005156|organism=Lepeophtheirus salmonis|type=mRNA|length=4302bp|location=Sequence derived from alignment at LSalAtl2s272:219557..223858- (Lepeophtheirus salmonis)
ATGCCAATGAACTGGAGATTCATTTTTTTCATCCTCTTGTACTACTTTGA
GTCAACAATTGGTAAAAACTGTATTCTCCATGAGTATAATATGTAAATTC
TTTAACTTTTTAATCATAGGAGACGAGTGCCCTAAGGGATGGATCAAGTC
AAGGAGAAATGTCTGCTCATTTGGACTTTACAATATTGCGATTAATTATA
CCTCTGCCTTAAGGTATTGTAGAGAGATTCATAATGCAGGGATAGGAGAC
TTTGAGGATATGGATGAACTTGAGATGATGAGTCTGCATATTCAGACAGA
ATCCTTCATTCGGTCCTCTCCATGGATGAATAAAGTCCATGATTTAAGAA
AGGTCGAAGAGGGAAAGGAATGCACTGTTCTCACAAAAAAAGGATCTCTT
TCCCGTATCGATTGTTCTCAAAAGAGGGGAGTTATCTGCTCAAAATGGAA
TGGTACGTGATATTCGGAAAAAATCCCAAGATCAATATAATTAATTGCTA
AATGTTAATCTATTTTTTTCCATAGCTGAATGCCCCTCATCTGACTATGT
TAACATTGATAATCAATGCTACACTTCCATCCAAAACCCTAAACAATATA
AAGACGCCATGGGATTTTGTACGGCTCTTTATAATGGGGGCACAATCCTT
CCAATCATCAAAACCTCAACACAAAACTCCTTAATTGCAGGTAATTAAAA
CTAACTTCTAAAAAACCAAATTTAAAACATAAAGCAAATATGTTTAAGAA
CGATTTGGATCCGTGAGACGATGGATTGGACTCAGAATGAGACCCGACAA
AGGGTATTTTCAATGGTCCGATGGAAGTATTCTTGAGGAGAATGACTATT
CAAATTGGTCTGGAGATGGAAAGCCACCTAATGTAGAAGACTATCAAAAT
ATAGTCTGTATAGTGATGGGAGAGGGAGGACTTTGGTTCATAGAGCCTTG
TGATGTGGAAAAGGAATTCCTTTGTCAATTAAATCCATGTAACGTCCAAA
TGAGGGATTATATTATAACCTAAGTAAATGATATATTTTTTTAACTATCT
AATTTATTATGTAGATGACACAGTTCCACCAAACTGTAAGTCTAATCATG
ACTTAAAATGGATTGAAGATCCTCATAATGGACTTTGCTATACAGTGATG
CACAGTCTACTGAAAGGAGAAAATGCAGAGACGTCTTGCCGTTATTTGAG
TATTGGAAGTAACACAGGAACCTTGGTCTCCATAATAAATCCCTTACAAC
AGAGGTTTTTCGAATGTAAGCCAACCACAAGTGATATATACAATTTTTAA
CATTTTGAATTTGTTCTCTTAGCTCACTTACCGAACGACGGGTATTCTGG
AACCTATTGGGTTGGATTAAGAAACGTAGAGGGAACTTTCACTTGGTTGG
ATGGAAGTCCCTATGGATTCATGAATTGGGAGGATCAACCAAGTTATGAA
AGAAATCATGAATGTGTTAATATGGTGATGAGGGGCGGATCTGGTAAATG
GAGAACAGAAGACTGTGAAGAGAGGCTTYCTTATATTTGTCAAGTAAAGG
GCTTTAATTATGTAGATCCACCAGAGCCTCCTTCAATGAGTAAGTTTTCT
TAGGGTTTATGTTTTTCTGCGATTTCACATAGTTATTTTCATTAATTAGA
TAACTGTCCAATTGGTTGGATTCGAGGAGGATCTCAATGTTTTTACACAT
CGGAAAAAAAACTTAAATTTGAAGAAGCAAATCAGTTCTGCATCTCAAAA
AACAAGGAATCTACCCTCGCAATACTAAGAGATCCAAAAGCTATCGAGGA
AATGAAAGGTGAATGCCATTGAATTAACTTAGACACTAATATGAATTGTC
CTAACGAATTGATTCCAGGCACGGTTCACAATCACTCATATTTCATTGGA
TTAAATGATATTAAAACAGAGGGAAACTATGTTTGGTTGGATGGGATAAC
TGATAAAAAGGAGGAGATTCCATGGGCTCCACATCAACCTGATGATAAAA
ATTCATCTCAAAACTGCATTGTTATGGATTCAAGCGTAGAAACATGGAAT
GATGTATCCTGCAATGAGGAAAATAGATTTTTCTGCTCAATGGAATACAG
TAAGAGCATTGATAGTTATTTTTAGTACACCTCTTATGAAACCATTCAAA
TATTTGAAGCTGTATGCCCTCCTCATTGGACCCTTTACAACAATCGTTGT
TTTTACCTATCCAAAGAATCTGTACAATGTGAAGAAGGCGAAAGACAATG
CAAAGCTGAGTCGTCTCAAGCATCCCTTGCAAGCATTCACTCCTCACATG
AAAATGATTTCCTTAAACATTTAAATCCCATTACTACAATTGATATATGG
ATTGGCCTAAAGAAAAAGTCGAATGAGGAATCATTTGAAAATTGGAGTGA
TGGAACAAGTATTGATTTCACAAATTTCTCAGATCGTGATGCTTCAATAG
ATGATGATCAATGTGTACGACTCAACACAAACGGATATTGGTTTCCGGAG
GACGCAAACAAAAACAACTTTTATAGCTGTTCCCTAGAAATTAGTAATTA
GATTAAAAGGAACTTGAACAAAGCTCATTAAAAAGGTTTTTGCTATATTT
ACAGCCCATTATATGAATTGCCCTTGGGGATGGAAGAAATCCAGGGAGTC
TTGTTATTTCTTTATGGATGAAGAGCTGACTTTTCAAGAGGCGTTACACA
AATGTGATGATATACATGGATACTTGGTAACGATTCCAAGGGAGGAGGCT
CAAGATTTTATTTATTCAGAATTTAAAAGTACGTATATAGAGACATATGA
ATCTATGAATTTACCATTAAGGGATGTGATTATAAAACAATTAATTATAT
ATAATATGTATAATTATTATCAGAGACTGGGTTGGAGGCACCATGGGTTG
GTCTAAGTACGTCAAAAACTAGTAACTTCTTTCTTTGGAGTGATGAGTCT
CCGACTACTTATACAAATTGGAACACAAATTTCCCAAAGCCTTTAGAAGG
GACTAGCTGTGTACTCATGAATTTTCAGAATGAAGGAAAATGGGAAAATG
TGGATTGTGACCACAAATTACAAGCTGTGTGTGAAACACCCATTCAAATC
TCTGATCTACCCCCGTCAAGTGATGCTGGATGCACGGAAGTAAGAGAAAA
TACATACATACCTATGTATATTTCAAGATATTAAAAATACTCATGATTTT
TATTAGGATCAAATGGGCTACGAATCTTTCTGTTATGAAATTTTCAAATC
CAAAGAGAACTATTACAATGGAAAATTACATTGTACAAATCTAGGTGGCC
ACTTTATCACAATTGAGAATGAGTAAGAGCTTTTCCTCTTTTTTAACCTA
GATTATAAATATAATTTTTATCTCTAATCTTAGAGTGATCCAAAACAAAT
TGATTCCTTTTATAAGTAACTCTGGTTCGAACTTTTTTATTGCTCTGAAA
TATGTTGGAGGAAATTGGGTCTGGGATTATTATGAAACTCCACTTAGAGA
TTTTGCATACTGGGCTCCTAATGAGCCAAATTTAGAGATAGATGATCCGG
AAGGAATCTGTGTTGAAATGATTTCAAGGGATCATTTCCTTGGAAAGTGG
AAAACAGTGGGATGTAGTAGAAAGAACGAAGTCCTTTGTCAATTTTCACG
AAAGGGTCATACACCAAAACCTCCAACAACAAAAGAGACTCAACAACCAA
CGATGGACCCTTCATTTAAATGCCCTCCTAGCTATCAAATGATTCGAAAT
AAATGCTACAAGTTTTTTAATAAAAGTTATAAGAATTTTGAGATGGCAAG
ACAGGATTGTGGAATTTATGGCGGRGACTTAGCCTCTTTTCAGAGCCTAG
AAGAGGAAATGGAAGTGAATAGGTAAGCTAACAAGGGATTTCATATCTTG
ATCAATTTATTTTAAGCATACAGATACTTTGTGGATTTTGGACTGCCGAA
AACATTTATAGGTCTAGCTGAGATCTCAGGACTTAGCGGATTCCGTTGGC
TCAACTCATTCATTACATATGGCACGTATACCAATTGGGGACCATTTGAA
CCTAAGTGTCCAAATTACGATAATAATTGTGTTTTTATCATGAATACACA
ATGGTCGTGTGGAAGCTGTCAGTTGGAACTAAATTACTTTTGTCAAGTGA
ACCCTAGTGATCAAGACTTTACTTCAAATACMCCTTCTCAAACAAMCCCT
CCACAACCTCAGTGTAGCCCAGGAGTCGATGATGGATGGTTTGTCATTCC
GCATCATGACTCCAATGTTTGCTACAAGTTTAGTAAAGAAGAAAAAATGA
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