EMLSAT00000005163, EMLSAT00000005163-701010 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005163
Unique NameEMLSAT00000005163-701010
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s272supercontigLSalAtl2s272:555567..557147 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005163 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005163EMLSAG00000005163-687929Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022564EMLSAE00000022564-731492Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778572auto778572Lepeophtheirus salmonispolypeptide
EMLSAP00000005163EMLSAP00000005163Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005163

>EMLSAP00000005163 ID=EMLSAP00000005163|Name=EMLSAP00000005163|organism=Lepeophtheirus salmonis|type=polypeptide|length=526bp
MSVALVITVCLILAXILYEIKWKYPENYPPTPPFRLPLFGHSLYLRSAGK
NFQEGFDRIFDRFNVGGVLCLQVAARIRMXMISDFDILKKILKTDDLNYR
LAHDFSIDYTKKLYQGIGVDGXLWSYGXIWKQQRRFMLSTLKNFGFGRSS
MEDMLMEEATLFVNFLNEENIQTGGNIRIANLFNIGILNVLWRIVAGTRF
EYRDPELQKIVHKVGDAILSTNLKPTIAAIFPFLRTIYPGIDDXQEVTSK
VAAVYEFLQTAVKNHEANFDPNHPRDFIDTYLLKIKDSEENPDKENDSFR
GELGKLNLSKTLLDLFFAGSETTSSTLSWGVLFMVRHPEIQKKVQEELDL
FLHEGDGESFRKARSEDRIHLPYTEAXICEIQRRGNITPMGVPHATYSGD
AKVGDYVVPKGHVVNAYLSGIFRNPKYFGPNPDQFNPDRFLEVASDGGVK
FIKNEYLIPFSIGKRSCPGENLARMEIFSFFTSILQRFELRSIDGEIPST
DFISGITSIPKPFNIKLIPRDVKIIV
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mRNA from alignment at LSalAtl2s272:555567..557147-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005163-701010 ID=EMLSAT00000005163-701010|Name=EMLSAT00000005163|organism=Lepeophtheirus salmonis|type=mRNA|length=1581bp|location=Sequence derived from alignment at LSalAtl2s272:555567..557147- (Lepeophtheirus salmonis)
ATGTCTGTGGCTCTTGTGATCACTGTATGTCTCATATTGGCTGKCATTCT CTACGAAATTAAATGGAAATACCCCGAAAACTAYCCCCCCACTCCACCCT TTCGTCTTCCACTCTTTGGTCATTCTCTTTATCTTCGAAGTGCAGGGAAA AACTTTCAAGAAGGGTTCGACCGCATCTTTGATCGATTTAATGTGGGTGG AGTACTCTGTCTACAAGTGGCAGCTCGGATTCGTATGGKAATGATATCGG ACTTTGACATACTTAAAAAGATTCTTAAGACTGATGATTTAAACTATCGT CTCGCACATGACTTTTCCATTGACTACACTAAGAAGCTATATCAAGGAAT TGGTGTGGATGGAGKACTTTGGAGCTACGGGKCTATTTGGAAGCAACAAA GACGATTTATGCTTTCTACTCTCAAGAACTTTGGATTTGGAAGGTCTTCC ATGGAGGACATGCTCATGGAAGAGGCTACTCTCTTCGTAAATTTTCTAAA TGAAGAGAATATCCAGACAGGAGGGAACATACGTATTGCCAATTTGTTCA ATATTGGAATTCTAAACGTTCTTTGGAGGATAGTGGCAGGTACACGTTTC GAGTACAGGGATCCAGAACTACAAAAAATAGTGCATAAAGTGGGAGATGC TATTCTATCTACAAATTTGAAACCTACAATTGCAGCAATCTTTCCTTTTC TGAGGACTATTTATCCTGGAATCGATGATMCCCAGGAGGTAACATCCAAA GTAGCTGCCGTCTACGAATTTCTTCAAACAGCTGTCAAGAATCATGAGGC CAACTTTGATCCAAATCATCCAAGAGACTTTATCGACACATATCTCCTCA AAATAAAAGACTCTGAAGAGAATCCAGACAAAGAAAATGACAGCTTTCGA GGGGAGTTGGGGAAATTGAATCTTAGTAAGACACTCCTGGATCTTTTCTT TGCAGGATCTGAAACAACATCAAGTACACTATCTTGGGGCGTCCTCTTCA TGGTTCGACATCCAGAAATTCAAAAAAAGGTACAGGAAGAGCTGGATCTT TTTCTTCATGAGGGAGATGGAGAGAGTTTTCGAAAGGCAAGGAGTGAGGA TCGTATTCATTTGCCTTACACTGAGGCGGKTATTTGTGAGATACAGCGAC GTGGGAATATCACACCCATGGGGGTTCCACATGCAACCTACAGTGGAGAC GCAAAAGTAGGGGACTACGTCGTGCCCAAAGGACATGTTGTGAACGCATA TCTTTCCGGTATTTTTCGGAATCCTAAGTATTTTGGACCTAATCCAGATC AGTTCAATCCGGATAGATTCCTAGAAGTGGCATCCGATGGAGGAGTGAAG TTTATCAAGAATGAGTATCTCATACCCTTCTCTATTGGAAAGCGATCCTG TCCTGGAGAAAATTTGGCTCGAATGGAGATTTTCTCTTTCTTTACAAGTA TTCTACAGAGATTTGAATTACGCAGTATAGATGGGGAAATMCCCTCCACA GATTTTATCTCTGGGATTACATCCATACCCAAGCCTTTCAATATCAAATT AATACCACGGGACGTGAAAATTATAGTTTGA
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