EMLSAT00000005183, EMLSAT00000005183-701030 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000005183
Unique Name	EMLSAT00000005183-701030
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s273	supercontig	LSalAtl2s273:497054..500557 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000005183 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000005183	EMLSAG00000005183-687949	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000022645	EMLSAE00000022645-731573	Lepeophtheirus salmonis	exon
EMLSAE00000022646	EMLSAE00000022646-731574	Lepeophtheirus salmonis	exon
EMLSAE00000022647	EMLSAE00000022647-731575	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto778183	auto778183	Lepeophtheirus salmonis	polypeptide
EMLSAP00000005183	EMLSAP00000005183	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s273:497054..500557+

protein sequence of EMLSAP00000005183

>EMLSAP00000005183 ID=EMLSAP00000005183|Name=EMLSAP00000005183|organism=Lepeophtheirus salmonis|type=polypeptide|length=252bp
MALSVRLLRSSPLLCRALPIRSYSTPVEEPQTTKNRKSSKYPRIYTRTGD
KGTSSLYTGERREKSDVIFEALGTTDELSSHIGLAYAYAAENGHPYLDNL
ERIQCLLQDIGSTIATPKSSARDTHLKKTEFNPEHTQELEEWIDEYSKNL
PPLKNFILPGGGKTSASLHIARSVCRRSERRVTPLVLEGQMEGEALKYLN
RLSDFLFTIARFAARLDKMQETIYTQPGDETKYESGPDGVWKIKKKSKNK
DV

mRNA from alignment at LSalAtl2s273:497054..500557+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000005183-701030 ID=EMLSAT00000005183-701030|Name=EMLSAT00000005183|organism=Lepeophtheirus salmonis|type=mRNA|length=3504bp|location=Sequence derived from alignment at LSalAtl2s273:497054..500557+ (Lepeophtheirus salmonis)
GTTCTCTGTATTTTCTACTTATTTTGCTCTTTATTGGTGTTCCGAACGCC
AAATGCTTAGACTCAAATTAGTTTTATGCATTTTCCTATGTTGAATAGTT
CCAAAAGTGGGGGAATATTGGCTAATTACCAAGTGAGGTTGGACTTATGA
ACTTTCCCCTGCGTTTGTGAAGGAGGAAAGGTTGCGAGACACAATCAATC
AAGTGGAGCTGTTGGAAGAGGGACAAGCTAGAAGTGATAGCTGCAATGTA
TGACATGGGTTGCCCAAACCATTTCATATCACATGATTATATCAAGAGCT
GTGCTACACTTGCTTGAATCGGAATAAAAAATTTTAATTATTATATAAAA
GCTAAAAGTTTGATAACTTTGATGACTTCCCGTAAGTCTTGCTCCTATGG
GTNAAAGAAAGAAAGTGAGACGGAGTTTGATATGACTCTATCACTAATCA
GTATTCTTACTTTTAGCAGTATTTTAATTTAATTSTTTTTCAATTKCGAC
ATTTGCGAKWTAGAATGGCCCTAAGTGTGCGACTTCTACGGAGTTCCCCT
CTACTTTGTCGAGCTCTTCCGATCCGATCCTACTCTACTCCGGTGGAGGA
ACCCCAGACAACAAAAAACCGTAAATCCAGCAAATATCCGAGAATCTACA
CAAGGACAGGAGATAAAGGCACGTCCTCTCTTTATACGGGAGAACGGAGA
GAGAAATCAGATGTGATCTTTGAAGCTCTAGGCACAACAGATGAACTCTC
ATCCCACATTGGACTTGCTTATGCATATGCGGCTGAAAATGGMCACCCCT
ATCTTGGTACGTACATCCTTTTCTTTCCATTCATTTTACTTTTTATCCCT
AACCAAGACAAATTGATGATATTCAATCTCTTACAGATAATTTAGAGCGC
ATTCAGTGCCTTCTTCAGGATATTGGATCAACTATAGCAACACCCAAGTC
TTCCGCTCGGGATACGCATTTAAAAAAGACTGAATTTAATCCTGAACATA
CTCAAGAATTGGAAGAGTGGATTGATGAATATTCTAAGAACTTGCCTCCA
TTAAAAAATTTCATTCTTCCTGGAGGTGGGAAAACAAGTGCTTCCCTACA
TATTGCACGCTCTGTTTGTCGTCGCTCGGAGCGTCGTGTGACTCCTCTTG
TGTTGGAGGGCCAAATGGAAGGAGAAGCTCTCAAATATCTCAATCGACTT
TCCGATTTCTTATTTACCATAGCTAGATTTGCAGCACGACTTGATAAAAT
GCAAGAAACTATTTATACGCAACCCGGAGATGAAACTAAATACGAGTCAG
GGCCAGACGGCGTGTGGAAAATCAAAAAGAAGTCGAAAAATAAAGATGTG
TAGTTAAGATCTTTGATGTAAAGGGCATACGATTCTTCTGCTTCCAGTGA
TTTTTATTGTACAATTGTGCGGCAGATTTGTATTCCTCTACCAACTATCC
AATAATAATATGTTATGAATGAAATGGTATGCTTCATACAATGAAGTTGA
ACAAAGCTGAATGTATCAATACCAACACACAAATTATTAATTCATATTTA
CTCAATTACTGTATTAATATATCGTAAATCAATTGTCAAATAATATTAAT
ATTCAAAATTTATTTTAAAGTAAGATGTTTTATTTCGTTTAAATTCAAAT
GGATGTATGTAAATTCCTTTGGAATTACGTTATTATTAAACTTTTACAAG
GTCATGTCATGATCAGGACTATTCGAAGGACTTGGACTCGAACTACCCGA
GCTCAAACCTTGAGAAGCCTCATTCATGCCTAATGTGTCTCCAGGAGCGG
ACTGTTTCTTGTGCTTGGAAGCGGATCCTGACTTGTGTTCATGTTTATGC
TTCTTATGCTTGTGTTTGTGACGTTTCTTGTCTTTTTTCTTTTTCTTCTC
TTTGTGAGGTTTGTGAGAAGGTTCTCCATTACTGTCGTCAGCTATAGGAG
TAGTGGGTAATGAGGAGGGATCATCCAGGTTGAAATATTCAGGGATATCT
GCGGTTGCAAGCAAAGGCCTACCAGTATCCTATAAACAAATTATGATATA
TATTTAATAAAGCTTCACATGATTAATAATAATCAATTTAATTAGATGTA
TTTACAACAGGTTTTTCGTCCTCTTTCTTTATGTGTATAGGGGACATTGA
TCCTAGTTGGTCGTACTTCCTTTTTTCTGCTCTTGGTATCGTGAAACTTT
TTTTATCCGCCTTGCTAGTTTTGTCTTCTTGAACTCTTTGGGGTGCTAGA
ATTGCTTGTAATTCAGGCAATGGCATACATACTGGCTTTTTTCTTCCATA
AAGTTTGAAATATATGTCAACAATATCACAGCGTAGTCTACTATCATACC
AAAACTTTGTACTAAAAATAACATACGTTCAAGGTACGAATCAAAATGAC
ATAAAAAAAAAAATTAAGCAACACTTACTTCATGAGACTCCAGAGTCTTT
CCACAAGTTGATAACGATCATTTTTATGGTTCTTAGCTCTTTCAAAGAAG
GGATTATCCACGATAAGTCGACATAACTTGTGTCTAATAAACGGTACAGG
ATCATTTTCAATAATCTTCAGTAAATGATCAATGTCATCACTCTTCCCCT
CAAGACTCGTAAAATCCACTAAACATTCAAGGGCACATATCCGTATATCA
ATAAATTGGCCATAAGTGGCATAGTCTCTAAATAGTGAAGGATTTGGTGG
CAAATGCCCTGTTTTCTGTAACTTTCTTATCGCTCTAAGGCAAGATACCG
TGACAGTATACTTGTAACAGGGAAGCAATTTTTCCAAATTAAGAAATCTA
GTTATTTCCTCAAGAATAAGTTTAGTATCAGGAGATAAAGATTCAGCAGT
AATGGCGCTTTCATTTTCAATGACAGATACTACAGGTGTAACAGTATGCC
CGAGGGCCTCGACCTATTAATAAAAAATAATCATAATAAGGAGACACTAT
TGGTGTTATATCAATGCATACCAATGCAGCGCGGTAGTAGTTATCTGCAT
GAGAGTTCTTTGAATTATCATTATACTTGAACAAATCCAAAAGGAATTTC
AAAACTTCAGGAGGACATATTCTATGAGCATTTCTAAGTTTAGCCATAGC
AACGGGGATTTCTTTTTGAAGAAAGTAACTTTGAAGATTAGAGAAGTCAT
TTTGCTTTATAATGTGACCAGCTGCAAAAGAGCCATAAAGCTTTTTAAAC
ATGAGAAGCATGGGTGGAGGACCTTCCCAACTAGATGCCATAGCATTTGC
TACTTTTGCTAAACAATGAGTTGATTGACATCGTACTTTATAAAAACATT
GCTCGTCCTCAATTATATCTCTCAACGCTTTACTCGTATTATTGGAGGGG
AAATTTTCCAAAGAAATTACTGCTTCACTTTGGGCAGTTACGTCACGTTC
ATGTCGAAGCTGATATTGCCATTGGAAATCTGGCTGACGAATATCCAATG
AACGAATAAGTTGCATATCTGGATCAACACGAATCCATAGAATAGGAGAA
TCAC

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