EMLSAT00000005194, EMLSAT00000005194-701041 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005194
Unique NameEMLSAT00000005194-701041
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2743supercontigLSalAtl2s2743:3462..4233 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005194 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005194EMLSAG00000005194-687960Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022709EMLSAE00000022709-731637Lepeophtheirus salmonisexon
EMLSAE00000022710EMLSAE00000022710-731638Lepeophtheirus salmonisexon
EMLSAE00000022711EMLSAE00000022711-731639Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768380auto768380Lepeophtheirus salmonispolypeptide
EMLSAP00000005194EMLSAP00000005194Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005194

>EMLSAP00000005194 ID=EMLSAP00000005194|Name=EMLSAP00000005194|organism=Lepeophtheirus salmonis|type=polypeptide|length=215bp
MENESETWSGLIGLLIQGNVDMVVSDLSTTLERGEVIDFVTPNYYQNGYP
VREQSLFKFMEVLKSEVWVSILGAFILTAFLLWFLEKYSPFSARNNLQKY
NEPIRVFDLKESFWFATTSFTPQGGGDLPKNISGRILSSTYWIFVVLILA
TFTANLAAFLTVERXKTSGKNLDELAQQSKINFSVVRNSTIHSYFLNLVK
AEDDIYTAWKDISLK
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mRNA from alignment at LSalAtl2s2743:3462..4233+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005194-701041 ID=EMLSAT00000005194-701041|Name=EMLSAT00000005194|organism=Lepeophtheirus salmonis|type=mRNA|length=772bp|location=Sequence derived from alignment at LSalAtl2s2743:3462..4233+ (Lepeophtheirus salmonis)
ATGGAGAATGGTAAGGACAATTACATATATATTTTTTACATCGTATTAAT
GGTAATTATTTAATTGAAGTAATTCAGAGTCTGAGACATGGAGTGGACTC
ATTGGCCTCTTAATACAGGGAAATGTTGATATGGTCGTTTCAGATCTATC
AACAACCCTGGAACGTGGGGAAGTAATTGACTTTGTTACTCCTAATTACT
ATCAAAATGGATACCCTGTTCGAGAGCAATCCCTTTTTAAGTTTATGGAA
GTTCTAAAAAGTGAAGTTTGGGTCTCTATTCTAGGTGCTTTTATTTTAAC
AGCGTTTCTCCTTTGGTTCCTTGAAAAATACTCACCCTTTTCTGCTCGAA
ACAATTTGCAAAAATACAATGAGCCTATACGAGTATTTGATCTTAAGGAA
TCCTTTTGGTTTGCAACAACCTCATTCACACCTCAGGGAGGAGGTAAGGA
TTTGCCTCCTGTATGTATGTATCTATGTAAAAACTTACTTTTAATTTAAT
CAGGAGATTTGCCAAAAAATATATCAGGACGAATTCTATCGTCTACCTAC
TGGATCTTTGTCGTTCTAATCCTTGCAACTTTTACTGCGAATCTGGCAGC
TTTTTTAACAGTTGAAAGAATSAAAACATCAGGCAAAAATTTGGACGAAC
TTGCACAACAATCCAAAATTAACTTTTCTGTAGTGAGGAACTCTACCATA
CATAGTTATTTTTTGAATTTGGTAAAAGCTGAGGATGATATTTATACCGC
ATGGAAGGACATTTCCTTGAAG
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