EMLSAT00000005195, EMLSAT00000005195-701042 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005195
Unique NameEMLSAT00000005195-701042
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2746supercontigLSalAtl2s2746:8859..10018 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005195 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005195EMLSAG00000005195-687961Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000022712EMLSAE00000022712-731640Lepeophtheirus salmonisexon
EMLSAE00000022713EMLSAE00000022713-731641Lepeophtheirus salmonisexon
EMLSAE00000022714EMLSAE00000022714-731642Lepeophtheirus salmonisexon
EMLSAE00000022715EMLSAE00000022715-731643Lepeophtheirus salmonisexon
EMLSAE00000022716EMLSAE00000022716-731644Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768831auto768831Lepeophtheirus salmonispolypeptide
EMLSAP00000005195EMLSAP00000005195Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005195

>EMLSAP00000005195 ID=EMLSAP00000005195|Name=EMLSAP00000005195|organism=Lepeophtheirus salmonis|type=polypeptide|length=240bp
MKLFFIFVSLGVVVGEFSSZWTLWKKLHGKRYVSFQIEELRFKIFEENRI
QNPKAYFKTGSVEGQYFIKNKKLLSFSEQQLIDCSTQYGNKGCNGGLMDN
AFKYLIDNKGIATEKKYPYLDEEDNCKYNKTMAVGQISSFNDVKRGSEDQ
LKLAVAQIGKRLIDCNILSIGIYIDNYCSSTNVDLAVLVVGYGTDKASGL
DYCLXKNSWGTSWGDQGYIKMARNHKNMCGIATLASYPLM
back to top

mRNA from alignment at LSalAtl2s2746:8859..10018-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005195-701042 ID=EMLSAT00000005195-701042|Name=EMLSAT00000005195|organism=Lepeophtheirus salmonis|type=mRNA|length=1160bp|location=Sequence derived from alignment at LSalAtl2s2746:8859..10018- (Lepeophtheirus salmonis)
ATGAAACTATTTTTTATTTTTGTATCCCTTGGAGTTGTGGTTGGAGAATT
CTCCAGYSAATGGACTCTATGGAAGAAACTTCACGGAAAAAGATATGTCT
CTTTCCAAATCGAAGAACTAAGATTCAAAATTTTCGAAGAAAACAGAATC
CAAAATCCAAAAGCATAGTACAGAAGCCCAAAATGGACTTCACACTTATA
CATTGGCAATGAACCAATTTGGAGATTTAGTAAAATATAATCCACATTCT
CCATTGATTAAAAAATATTTTATTTACATTTACAGCTTCAAAGTGAATTT
CTTCAAGGATATACTGGATTGGCCCAAGGATCCTTTTCAGGTGAGAACAC
TGTTATTTTAGACAACAGTGTGCCGGTTCCTTCTTATGTTAATTGGACGA
AAAATGGAGCAGTTACAGCAGTCAAAAAAAGTACATATTGTGGATCATGT
TGGGCATTTTCGACTGTATGTATTTAAACAAAAAATCTGGAATCTATAAA
TATGTGTATCNNTTTAAATTTCAGACTGGCTCTGTAGAGGGACAATATTT
CATCAAAAACAAGAAGCTTCTTTCCTTCAGTGAGCAACAATTGATTGATT
GTTCCACACAGTATGGAAATAAGGGATGTAATGGTGGATTGATGGATAAT
GCCTTCAAATATCTCATTGATAATAAAGGTATAGCTACAGAGAAAAAATA
TCCATATTTAGATGAAGAAGACAATTGTAAATACAATAAAACAATGGCAG
TAGGACAAATTAGCTCTTTCAATGACGTTAAACGTGGAAGTGAAGACCAA
TTAAAATTGGCTGTTGCCCAAATCGGTCCTATTTCTGCAGCCATTGATAC
ATCATCTCTTTCTTTTATATTTTAGGAAAAAGGTGAATTATCTTTAGATC
ATATTTGTTTAAATTTTAGGCTAATTGATTGTAATATTTTATCGATAGGC
ATTTACATAGACAATTATTGTAGTTCTACTAATGTGGATCTTGCTGTTTT
GGTTGTTGGGTATGGTACGGATAAGGCATCGGGACTGGATTATTGTCTTN
TCAAAAACTCATGGGGKACTTCTTGGGGAGACCAAGGATACATCAAAATG
GCCAGGAATCATAAAAACATGTGTGGCATTGCAACACTGGCTTCATATCC
CCTCATGTAA
back to top
Add to Basket