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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s279 | supercontig | LSalAtl2s279:381110..387146 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000005244 >EMLSAP00000005244 ID=EMLSAP00000005244|Name=EMLSAP00000005244|organism=Lepeophtheirus salmonis|type=polypeptide|length=328bp
MDXLRLLLSKGARIQSSGEHNQNVLHKASSVGKIEILELIVNDIIDKFGE
EELQMLLLEDDSDGNSPLLLAVEGGCTKTVEYLIKKGSDVNYSNASKSTA
LHIACKIGNIDIVKVLIQERAHIDSLNGQYQTPLMMSCKFNNVDITDYLL
TCGASIERKDKHNHTPLLLASMDGNIEAVRMLLERGADIFALDRTDKIVM
DILKRDRFSVNDSDFESHTSLHLACIFGHSKVVSTLIAAGADIEARNYCL
WTPLDCAAAYGQTKCANLLLNANAPIDARDKNKTTPLHLSARYGHENVAK
LLIKNGASLWQSNSAGHNALTLAITHGK back to topmRNA from alignment at LSalAtl2s279:381110..387146- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000005244-701091 ID=EMLSAT00000005244-701091|Name=EMLSAT00000005244|organism=Lepeophtheirus salmonis|type=mRNA|length=6037bp|location=Sequence derived from alignment at LSalAtl2s279:381110..387146- (Lepeophtheirus salmonis)
TCGTGATCAGCAAAACTTGACTCCTCTCCATTTGGCTTGTGCATATGGAC
ATATGGACGKTCTGAGACTTTTGTTATCTAAAGGAGCGAGGATACAAAGC
TCCGGAGAGCATAATCAAAATGTTCTTCATAAGGCATCTTCTGTTGGTAA
AATTGAAATCTTGGAGTTAATTGTGAATGACATAATTGATAAATTTGGGG
AAGAAGAGCTTCAAATGGTAGGATATAAGTTAACCTATACCTTTCTACGT
TAAAAAATATGTATAATTTACTAAATGTTTGTGGATGGGTTATTCCACAA
CACATTGCCTCTTAGATTTCTTTAATAAACTTGAACATATAGAATTTTAA
ATGCAAATTCTAAATCATTTTTTTATTTTTTACAATTTGGACATTGTTTT
ATGAGATATAAATATGAAAGTATTTTTAAAATTTCCAAACTGTGGAGGGT
ATACATTTCTAACCGTAAAAGGTTCTGAACTTGGGTTCCAATTCAGGAAA
GAAATTATTTCTGTAAAGTTAAAAAGTGTAATTTTTTTGAACGAAAATAT
TTTAATATTAGCTTGTTTTGGGATTATGACCTAATAATCTGTCCTTTGAA
CATTGTCGATTTCATAAAATTGAAACAATTATATAGTTCTGAATCTCCCC
TAATAGTATAAACATTATGAATATTTAATTTTAAAGAAATTTAGATTTGA
GCTAGGAAGGAAATACAGTTCCTTTTACAAATATACCCGTATAAAAACAT
TTATTTTATCATGTTTTAAAAAAAGACAATGATTTGAAATTTGATATTTA
TATAATACAGGGAAAGGCTCATTTTGTACAAATAAATTCAACCCAAAAAA
AAGAAAAAAAAAGATCTTTAAGGCCAAAATCCGACACTGATCTAAGTTTT
TCTCTCAGTCATCTACATTATGAAATATTTGGGAGTATAATAATTCGACT
CTATTATTGTTTTGAGTCATTTTTCACCATCCCCAAATTAAAATTAGGAT
TAATAAAACTTACGTAAAAGTGTTTATGATTAAAAAGTGATATTTTGAGA
TTCTGTATCTTGTTCCGAGGTTAATATATTTACATTTTTAGGATAAAAAT
GATGAAAAAAGATACTCGGATCAGTTATGGGTTCTGCACTCATAGATACA
TTACATTATTGTCTTCATTTCAATCATTTGTAACTAATTCCTCCTTCTCT
TAATTGTTCCCCTGTGTAATAGGATTATATAATTAATAATTGAAATCAAA
ATATATGAGAAAAATCAAATGGGGTAATTTTCTTGGGATTTGTTATGAAA
TAAATCGAATTCATTTATATAGCTACTTTTGGAGGATGATAGTGATGGAA
ATAGTCCGTTACTTCTGGCTGTAGAAGGTGGCTGTACCAAAACAGTGGAG
TATCTCATTAAAAAAGGATCTGACGTCAACTATTCGAACGCATCTAAATC
AACTGCTTTACATATTGCATGCAAAATTGGAAATATCGATATTGTCAAAG
TACTCATACAAGTAAGGCCATTTGAATGGAGCTTATGGGAGATCACAAAC
CAAAAAAAAAAGGGATTATATTTTGCCATTGATATTTCAAATGAATTTTT
CAGGAAAGAGCTCATATTGATAGTCTTAATGGGCAATATCAGACTCCTTT
AATGATGTCCTGTAAGTTTAATAATGTGGATATTACAGATTACCTTTTAA
CGTGTGGTGCGTCTATTGAGCGTAAAGACAAACATAATCATACTCCTTTG
CTGTTGGCATCCATGGATGGGAATATAGAAGCTGTACGTATGTTACTGGA
AAGAGGTGCAGATATATTCGCTCTTGACAGAACAGATAAGTCAGCGATAT
TTTTGGCCGCTGAAAGTAACAATCCAAATACGTTAATGGTATCTATGTAT
AAATAATTCATAAAAACCTAGTCAGAAGTTTTTTGATCAATTAACCCTTT
GTTACGTCCCTTCAAATCCTAATGCAAGTACTTTCCTGGGATGTTTAGCC
ACTCTAACATTATATATGATATTTGAGCCATGTAAAAATTTGTCTACCCT
TACATTTGATGCTAGAAGCACGGATGTACAAATTGATCACTTTTTTTAAC
ATTTTATTTTGTAAATGTATATTTATAATCTGAAATAATATTAAAAGATT
ACTGAACTACGTGGAAGGGAGAAGTTACTCTCCTGAAATCTGCTTCAAAA
AGTTCGACTCATGGTCGTTACTGGAGAAGAATATGTATGTAGATAAACAG
TGTCATATGAAGGGGAAGTTGGGATGTAGGGTCTGTTGACGCTCCAAATA
TGTTTGTTTATCTTCAACATCACTATATAAATGTATTTTTTCATAGAAAA
ATTATAAATGACAAATCTATGGAAAAATAATCAGCTTACTTTTCTAAAAT
AAAAAGATAATTCTGTAAAATTCAGAGTATAAAACCCTTGATAATGTATA
TATATTCACTTCAATTTTGTAGGTCAGATGAATCACTTGTTGTACTAAAA
TGTTTTTCTTAAACATAGGTGGTGCAACTTTATTTCACAGTTGAGGGGAA
AAAATAAATGTTGCAGAAACTTATGTCGACACTAAAAGGTATAATATTTC
AAGATTAAATTAATAAATTATTCACACACGAAAAATGTTCTATTTACATA
AAATAAAACATTTCCCACTTCTTTTCCTTCAATATTTTTTWTWTTAATAA
TMAGAARAYAWAAAAATATTCTATGAAACCTCGATAATTAATTCATTATT
TATAAAGTAATGCAGTAGCGTTACCCAAAAAATGAATACAGAAAGTAATC
TGATAAATTATGACTTTATAAAAATGATTGATCAAATATAGAAGGCTAAA
TCTGTCCTAGTGGTGAATAAACTTCCTCTAAATATAATGATAAAGATTAA
TTAAAATATATTATTAGACTTCCATTTTAAAATGAGTAAAAAACTTCTTA
CTAAGTACAATTTTAACTTTTTTGGACAATATATTAATTTGTGTATGATC
ATAATTTCTTTCAATTCAATAAGGCTTTACTACAAGATTGCCGATCATTC
GATTTGGTTAACTTTGGAGACCATTTTGATNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAAATCATCTCGTTCATC
ACTGAGTTCTTTTTGAACGCTTTAATTGTAATAAACTAGAATATGAGACA
AATCCATCCTTTCTCACTCTTTTATGCCACACTTCAATTTTGACACATTT
TTTCCAAAAATATAGTTTTTCAAAATTAAAATTTAATGTAACGGTAAAAA
GGGGGGGGGGGGYCCAAATCTGTGAWAAGGTCTTTTAGAAACAGTTCAGT
TCTACTTAAATGTGTATGTGGAACTAAAAATATAATAGATGAGGTAATAT
CATCAATTTTGTAAAAAATACTTCTACAATTGTAAAATATCAATTCATCA
AAGTGTATTGTAAATGGATTTAGGACAAGAAAAAATGAAGTTTTTTTATA
AAGTTTTTACGCTCCTTTATAAGCATCTTCTTTATAACGTAACGGGATTA
GTGAACTGGTTCAAAAAAGAAATAAAACGTATTACATACCGTAATAAACA
GTTGAACTTTTTTAATAATTATGTCATTTAAATTACGGGGTAAGGACTCA
AAAATTAGAAAATTTAAAAAGCCATTGTCACTTTTACATCTTGTTATTTT
TTGCAATTTTGTGGCAAACTTTTTAACCAAAAGTTGGTAATTCAACAATT
TTCTAAGCTGTATATTTAATATGTTAACCTCGTTTCTGAATAATGGTTTC
ACTACAGGGATAAACAGAAGCACAGCTGGCCTTGATGAAGTCTGGGGACA
ACTTTTTTCACTCTTCCGTGATCACGGGCTTCAGTTCATCTACATTTGGG
TGAGAAGTTGCGTAGATTCACGTTGGGTGAGGATGAAAAGAATAAGTCTG
CCGGCCAGAAGACAGTCATGTTTTCCCTACAGAAATGCTGCACCTTCTTG
GAACTTGTACCAGGACGCCATCTTGGGTAAATACATAGTTGTCCTTGGAG
AACGTGCACTGAAACCATGGTAAGACATGGTATTTGGGGACCTTGTAGTA
GACATTCGTGTTGACTTTCTCGTTGGCCTCGAAGAAGTAAGAAGGTATCT
TGCTGCTGTCGGACGCCATACACCGAGGACCATGATCTGAGCTGAATGTT
TGCTGCTAAAAGTTCCCTCGATCTGAGATCGTGATTTAGCTAATAAGCAA
TTATTTATCCTGTGCAGAAAAGTGTCCACTGTGAAGATCTACTTGTGAAA
GATCGAATTTTGTACAGAAGGGATCGCACACTCTTTGCCGTTTTGCTTGG
ACATTTTTGATCGGACAAAAACAGAACAAACATTAAATTGTAGCTTTTTG
TCAGTTCTTTTGGGTTAGTGCAATATACAAAATTATCAATCTTTAAGAAC
TGAGGATAGAAAACCCTGAAGAAGACTCTAAGACTCTAATTTTGGAGTCT
TCATCCTTATATATTTTTTTTCTATTCCATCCATTTTACATTCGCAGACA
TTAATTAGGGGGGGGGGGGGTACGGGTGATGAAAAACAAAAATACTTGTT
TTTAATATTATAGATAAAGAAAAAATAGATTATTATTTAAGATAATCTTA
ACAACAAGAGTTTGGGGTTTCAACAAAATCTAAATTGTTATTTTTATAGT
AAAAACATTAAACTTCTATTTCAATAAATATTTAAAGTAATTCTTGATTA
CTTTATGAGAGTTTAAGTAACGAAATAGAAAAAATAACGAAAAAAGAAGA
ATCCAAGAAATAAAAAAACAAATGGTAAACGGTAAACAGTTAATTAATCA
ATAAAACCTGGATTAAAAATGTTTTAATTAAAGAATCCATCCTAATCAAG
GGAATTCTCAAGATGAATAAAAAAATGCAAATAATCTGATTTAATGCTTC
AACAGTATAACAAAAAGTAATGGCAATAAAATGTAATTTGATAGGATTAA
AAAGGATTTTATTAAATTTAGGGAGTAAAATGTCATAGTTGACTAACACA
GCATTAACGTAGTCATAATAGATCAGATGTAGTAAATTGTATAGTGTTAC
ATAGATTAAAAGTCAACCTGCGCATCATTAATCTAATTTTTAGGTCCTAT
TGTGAGAATTAGATATTCATGAAATGTCAAACAGATATTTAAAAAAAAAA
AATCTGTTATTTTAATTATGTTTGTAACTTTCAAATTATACAATGCAAAT
GGATATGAGATTAAGCATCTTACCTGTTATTGAACCATTTTTTTACTTCT
TATTTCTTTCAATATTTTGATTATATGGTATTTCTTAAATTTATAATAAG
TCAACTTTAAAATATAATTTTATTTGATAATACATGATTGCATTGGCTTT
GTGTTCAATGTAAATACAACACATGTCTCTTCCGCAGAATTGTTATGGAT
ATTCTAAAACGAGATCGATTTTCTGTGAATGACTCAGATTTCGAATCCCA
TACTTCACTTCACTTAGCTTGTATCTTTGGACACTCCAAAGTTGTATCAA
CATTGATTGCAGCAGGTGCTGACATTGAGGCAAGAAATTACTGTCTTTGG
ACTCCATTGGACTGTGCAGCAGCATATGGACAAACAAAGTGTGCCAATCT
ATTATTGAATGTAAGCTTCAAAGGAATATTAAATGCGTTTTAGTGTCATA
TTATAAATCCACTTAGGCAAATGCCCCAATTGATGCACGGGATAAAAATA
AAACGACACCTCTTCATTTAAGTGCTCGTTATGGTCATGAAAATGTTGCA
AAGCTATTAATTAAAAATGGGGCATCATTATGGCAATCCAACAGCGCCGG
ACATAATGCTCTCACTTTAGCTATTACACACGGAAAA back to top
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