EMLSAT00000005267, EMLSAT00000005267-701114 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005267
Unique NameEMLSAT00000005267-701114
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2819supercontigLSalAtl2s2819:7389..12032 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005267 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005267EMLSAG00000005267-688033Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023021EMLSAE00000023021-731949Lepeophtheirus salmonisexon
EMLSAE00000023022EMLSAE00000023022-731950Lepeophtheirus salmonisexon
EMLSAE00000023023EMLSAE00000023023-731951Lepeophtheirus salmonisexon
EMLSAE00000023024EMLSAE00000023024-731952Lepeophtheirus salmonisexon
EMLSAE00000023025EMLSAE00000023025-731953Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768698auto768698Lepeophtheirus salmonispolypeptide
EMLSAP00000005267EMLSAP00000005267Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005267

>EMLSAP00000005267 ID=EMLSAP00000005267|Name=EMLSAP00000005267|organism=Lepeophtheirus salmonis|type=polypeptide|length=537bp
MKMSGNSVKAGEGSASQITYSQQTGAAQNAASATTQYIPQFATYNQQGQL
VISPSNFPASAYGQHQIFLTAAPGMQQAQQTQQQAVQQQQVQQQQAAQHQ
QQQSNHQGGSAKGLLTTTQGNKQSATLVPISQHQGYTLTHNGLVQSNSPG
QQTYMFANTSPLMTASQPGLFTSLSSNEAKNDSSKQGQSGLVQQNTAGAT
TAQAHQGSFIMHNGIAYMNPQHQQAILSSNGQIILRAPTSHETTQQPIMF
SPSALTQQSHIQSPGATNQQQGQQQAGQQLSLAPPTLQPMSLSATNTAGT
IRHVTTNSNNVSSQSGAPPGKTAISRALPTILPTTNAKPPTSTPPPVSSS
LXPSTTNGVTESGSVNNGTSGGRDTPKAFVKPNVLTHVIDGHIIQESSQP
FSLEAGDDKAQNPGGVPKKESLTEESFSHKHNSSSNSISSPATTGTCVVS
LSVSSGSSSXPXMAXXTATTTSTKSSTPSTNSSVTTGTTTHAEKKRGPGR
PSGSTRQNIDNQRNPGSGNNQSSKGNNHHIKDGSGPP
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mRNA from alignment at LSalAtl2s2819:7389..12032-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005267-701114 ID=EMLSAT00000005267-701114|Name=EMLSAT00000005267|organism=Lepeophtheirus salmonis|type=mRNA|length=4644bp|location=Sequence derived from alignment at LSalAtl2s2819:7389..12032- (Lepeophtheirus salmonis)
ATGAAAATGAGTGGAAATAGTGTAAAAGCTGGCGAAGGTTCTGCCTCTCA
GATCACATATTCTCAACAAACAGGTTTTCCTACGATCGCCCCCGGCCCAC
AACAGACAACTCTTGGACAGGGACATCAAGGGATCATGTCTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCA
AGGACAATTCCAAGTGATTTCCTCTCCTCCTTATGGGACCTCAGGAGCCG
CTCAGAATGCTGCATCTGCTACCACACAATACATTCCTCAATTTGCGACT
TATAATCAACAAGGACAACTCGTCATTTCTCCCTCCAACTTCCCTGCCTC
AGCCTATGGGCAGCATCAAATCTTTCTCACAGCTGCGCCCGGAATGCAAC
AGGCTCAGCAAACGCAGCAGCAAGCAGTACAACAACAACAGGTTCAACAG
CAGCAGGCGGCACAACATCAGCAACAACAGTCTAATCATCAGGGAGGCTC
TGCCAAAGGACTTCTTACGACCACTCAGGGGAATAAACAGTCTGCTACAC
TTGTTCCCATCAGTCAACATCAGGGCTATACTCTCACTCACAATGGACTT
GTTCAGAGTAACAGTCCGGGGCAGCAAACTTACATGTTTGCTAATACCTC
TCCCCTCATGACGGCATCTCAACCCGGCCTATTCACCTCTCTATCATCCA
ATGAGGCGAAGAATGATTCTTCCAAACAGGGACAATCCGGACTAGTGCAA
CAAAACACTGCTGGGGCTACTACAGCACAAGCTCATCAGGGATCCTTCAT
TATGCATAATGGAATTGCCTATATGAATCCTCAGCATCAACAGGCTATCC
TCTCATCCAATGGACAAATCATTCTGCGAGCTCCAACGTCTCATGAAACG
ACTCAGCAACCAATCATGTTCTCTCCGAGTGCTCTTACACAACAGAGCCA
TATCCAAAGTCCTGGTGCCACTAATCAGCAGCAAGGACAGCAACAAGCTG
GACAACAACTTAGTCTAGCKCCTCCAACATTGCAGCCTATGTCACTGAGT
GCAACCAACACTGCAGGAACTATTCGTCATGTAACGACTAATTCTAACAA
CGTGTCTTCGCAGTCTGGAGCKCCTCCCGGTAAAACTGCCATCTCTCGTG
CTCTCCCAACCATTCTTCCGACCACGAATGTTCGKCCCKCTTACKCTCTT
CCTCAGARCCCTGTTTCACAGGCCTCTCTTCAAGTAAATCATCAGCAGCA
ATCGAGCCCCAAGAGCAAGAATAAGTTTAGTCCTCGAGGTGGTATGGGTT
CTAGTGCMGGACGCCAGCAGCCAGGAAAGGGCAATTCATCAGTAGGAGGA
GCTACAGCCAATTCCATTCTGAAGCCCTCTATGGTTCAACAGAGAGGTAC
ACCTCCTGGAACTGGAACCATTATGAGTTCCTCTCCAAGTCCTCTATCCA
TGGGCCCACCCATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
ATCAACCAAGGTTCTTTCCACTTCATCCACCGCTTCCAAAAGCAAAACTT
CATCGTGGAACAATAATACCCTCATCAAGGCTAAACCTCCTACCTCTACT
CCACCTCCAGTTAGTTCTTCTTTAAKCCCATCAACAACCAATGGAGTGAC
TGAAAGTGGATCCGTCAACAATGGAACTAGTGGCGGSCGNGATACTCCCA
AAGCGTTTGTCAAACCCAATGTTTTAACGCATGTCATTGATGGTCATATT
ATCCAAGAGTCCTCTCAACCCTTTTCTCTGGAGGCCGGAGATGATAAAGG
TAGGTCATGAAGGAAATATTCTTTTAATACGTAATAACAGTCATAACGGT
CATGGTATGCTCAGTTTGTATTGATAATAACATTATGCTGCGCCCCCTCC
TCTCCTAAGTTGGGGTGTTTTGGGGGTTCCTGGGCTTTGTTTCCCTAGTA
GTATTTATTATACTATATAACCAATGATACTTACTCGTTCAAAGTACTCA
AGGTTGCGTGGTATCTCCCTCTTCTTCAAGAAAGGGAAAGTGAACCAACA
TATGTTGTAATAGTACAACTGTGTTTGAAAAAGAGAGGAAAAATTCTCCC
TATTCCATGGTAAATTAATATTTTAATTTTCGTTAGATGAGATGAAGCCC
TTTTACATTTAATTATATATGTATACTTGTTGGAAAGAAGGAAACATCCG
GTGGTCGTATACACTAAAGTATTATTAATATAAGGGAGTCAGAATAATGA
TGACATTTGAAGGGGATAGAGAGAGGGAGAGAAGCTCGAACAGCAGCAGC
TGAGCATCTTTTTTTGTACTAAATCCTCCTCATCAAATGCTAATGTTCAA
CATTGTTTAACTTAATTTAATATTAGGAAGAAGGATCTTTCATTGGATTT
TACAAGAATTATATGTAACGTTAGCGCTCACTCGCTCCTTAAGCGCGCCT
GTAATTGAGAGAAGGGGAGTACAATTCACTATAATCTGGCAGTCTGTGCA
ATCATATAAACTCCTCCTGTTTTGTTCTTCTCTCCTAATATTTTTCTATA
TTTTACTAAGTGAGGAAAGATTCTCTCATTGGATGCTGCTGTTCTTATAC
TACTCCATATTAGTTCCCTCCCACTTTTTTAAAATTGTTATTTTGTTGTT
CCTTTCAAGTATGACAAGTCTGTATATAGAATGAAAACGCGCCTTGAGGG
ATTATAGAATATACTCTACGGGGTGCTGGTGGGGGGGGGGAGGAGTGTAT
CTACGGAGACACACTATGTTGAAAATATATAAATAAAAATGTGATTCTTC
ATGTAGAAAGAGAGAGAGAGTGCGATGATCAAAGTTATTTATTTATCGCG
CTTGTGTAGAACGTCGTCGTGGTTCCCTGACTACTACAAACATTCTCTCT
CTTTACACAATTCCACGTCAAGTTACACACCCTCACGGCATGACCCTCAT
CGATTTTGATGATTTTTGGTAAGCTGGATTTTCTATTTAAAATAAGCGAG
TTTGTGAAATATTAGGGTTCTATGACTCACATGGGCCGTTCTAGGCCCAC
TCAAGGGCCTGATGCGTTGGACATGTCTTGTTTAGAAGACCATAATTCCG
CTCATAGTGGCTCGATTTTAATACAAATTACGTTAAAAGATGTACAAGAA
CACAAACTTTAACTTATATTCCCTCATATTTTTATTTTTAATCAAAAATA
AAAGTTTGGGGCTCTGGTGCGGGCTTCAAAATGGCTCCTATGCCAAGCAG
CAAACCTGATTTTGTTTTAATTATCGTAGAACATGTATCAGTATATGTTT
TCAATCATATCCAAAATTCAGAGTGGGATCTTTATGGGATCACTTCCAAC
AAGAGTATTATTTAGAGTATATATACGGCCCAGGCGAGTTACTGGATTGT
AATATTTCAAACACTCTCTTATTTTATATAGAAAAGCCAGTTCACCAAAA
ATCATCAAAATCACAGAGGGTCATGTAAATTGAAAAAAAGTGTGTACGCT
TGACGTGAATGACGCAAATGCATAAAAGGATGGATGTGTTTCTAATAAGA
GGGATGCATAATGTTGATTGATAACTTTAATAATAATGGAAAGGAAAGTT
TGGCAACAACTGTTTTTCTTTTATTTTTTGCGTAAGTAGGTGGAGTGATC
ATGAAGAATGTAATGTACTACTACTCATGTTAGACAGAGATCGAATTAAA
CCTCTTATTTATTTATTTCTAATACGAAAAAAGATCTTCCATTTCGTCAT
TCCTTCCTCTATAAGTTAAGTCTTTTCCTCTCCTTTTTGCCTGCATTAAT
GAAATTCCTTTTAATAGATACTACTAAAAGAGGGGACAAAGTCTCTTACA
AATCTTAGTACAAACACAAACCATTTCCAGATGTTTTCGTTCACAGAAGA
AAAAAAAGTTTTTCTCCTAAACAAATATATGTACATAGATAATGGAAAGA
AAGACTGAATAATTTTAACATATTCCTTTTTTTTTATATCTTCCAGCTCA
AAATCCCGGAGGTGTACCCAAAAAGGAGTCTTTGACGGAAGAGTCCTTCT
CCCACAAACATAACTCTTCTTCAAACAGTATTAGCTCCCCCGCTACCACT
GGCACATGCGTTGTTTCTCTGAGTGTCTCTTCTGGGAGCAGTAGTKCTCC
TAWAATGGCCKCCKCCACCGCCACCACCACATCTACAAAATCAAGTACTC
CCTCGACCAACTCCTCAGTGACTACAGGAACCACCACGCATGCCGAGAAA
AAGCGTGGTCCTGGTCGACCGTCCGGTAGTACGCGTCAAAACATTGATAA
TCAACGCAACCCTGGCTCTGGGAACAATCAGAGTAGTAAAGGTATGTTGA
AATATACTCATTGTATCTTGAATCATTCTTAATTATTCGTTGATTTGTTT
TTGTAGGAAATAATCACCACATCAAAGATGGGAGTGGTCCACCC
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