EMLSAT00000005269, EMLSAT00000005269-701116 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005269
Unique NameEMLSAT00000005269-701116
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s281supercontigLSalAtl2s281:237457..238966 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005269 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005269EMLSAG00000005269-688035Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023027EMLSAE00000023027-731955Lepeophtheirus salmonisexon
EMLSAE00000023028EMLSAE00000023028-731956Lepeophtheirus salmonisexon
EMLSAE00000023029EMLSAE00000023029-731957Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775060auto775060Lepeophtheirus salmonispolypeptide
EMLSAP00000005269EMLSAP00000005269Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005269

>EMLSAP00000005269 ID=EMLSAP00000005269|Name=EMLSAP00000005269|organism=Lepeophtheirus salmonis|type=polypeptide|length=453bp
MIFSILWFVISVSLLYFYLNRRHGYLEKLSLPHEKAFLCFGSPPILWYDH
IHHFYFMEAFKRFQSQTFTRYNGSLPSLTTINPSIIKQVTIKQFNHFHKV
QDKNLLLSLSGGSLWKLLRKDMTPVFTSGKLKEMMEPVSEIANQFVAYIE
TQSSEGKSIKIKHKFQGLTLDIINACAYGIKTNSSEEPDHELLRHSKMLL
NDSFIAKNVITSVLILLFNSFPGMFKYVDIFGKANDELIKIANSIIKTRE
THNIEKKDFLNVLVQMRKKSYSTTSMTLCCLTYILATHPEIQEKLYKEIV
SSQDKDFSEHSYTSAVIKETLRMYPPVTLHLRACVKDTEVEGILIKNGTI
VEMPIYASHYNPEFFPTPNEFKPERFFQENNLEIIPNTYRPFGDGNRSCI
AYRFAMMELQLILEKLVKKFEILPTHETKMVPSKGSLFLFEVEDIGVEFK
ARD
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mRNA from alignment at LSalAtl2s281:237457..238966+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005269-701116 ID=EMLSAT00000005269-701116|Name=EMLSAT00000005269|organism=Lepeophtheirus salmonis|type=mRNA|length=1510bp|location=Sequence derived from alignment at LSalAtl2s281:237457..238966+ (Lepeophtheirus salmonis)
ATGATTTTTTCCATTCTATGGTTCGTGATTAGTGTATCTTTGCTATACTT TTATTTAAATCGTCGTCATGGATATCTGGAAAAGTTATCACTTCCTCACG AAAAGGCATTCCTTTGCTTTGGAAGCCCTCCCATCCTCTGGTATGACCAT ATCCATCACTTCTACTTCATGGAGGCATTCAAACGCTTTCAATCTCAAAC CTTTACTAGATACAATGGATCCCTTCCATCCCTCACTACTATCAATCCTA GCATCATAAAACAAGTTACTATTAAGCAATTTAATCATTTCCACAGTACA ATGCAAAGTGGCAAGTATTTGTTTCTGTTTTGGAGTGAGATTAGAAACTA ACATTAGTTTTTATGATTTTAGAAGTACAAGATAAGAATTTGTTATTGTC TTTATCGGGTGGTTCCCTTTGGAAACTTCTTCGTAAAGATATGACACCAG TGTTTACTTCTGGAAAATTAAAGGAAATGATGGAGCCAGTTTCTGAAATA GCAAATCAATTTGTAGCTTATATTGAGACGCAAAGTTCGGAAGGAAAGTC AATCAAGATTAAACATAAGTTTCAAGGGTTAACTTTGGACATAATTAATG CTTGTGCGTATGGAATTAAGACCAATTCCAGTGAAGAGCCTGATCACGAA CTTTTAAGACATTCAAAGATGTTATTGAACGACTCTTTTATCGCCAAAAA TGTTATAACAAGTGTATTGATTTTATTATTTAATAGTTTCCCTGGAATGT TTAAATACGTGGATATATTTGGAAAGGCTAATGATGAGTTAATTAAAATA GCAAATTCCATAATTAAAACCCGTGAAACCCACAACATAGAAAAAAAGGA CTTTCTAAATGTTTTAGTTCAAATGCGGAAAAAAAGTCATGAAGATCCTA ATTATTGTTGACTGACGAAATTATAACTGCTCAAGCCATTATTTTTTTCA TAGCAGGCTATTCTACTACGTCTATGACACTGTGCTGTTTGACTTACATC TTAGCAACTCATCCTGAGATTCAAGAGAAATTGTATAAAGAAATTGTGTC ATCACAAGACAAAGACTTTTCTGAACATAGCTATACATCAGCTGTAATTA AGGAAACACTCAGAATGTATCCACCCGTGACATTGCATCTCAGAGCCTGT GTGAAGGATACTGAAGTTGAAGGAATCCTCATAAAAAACGGAACTATTGT TGAAATGCCAATCTATGCCTCACACTATAATCCAGAGTTCTTCCCAACCC CAAATGAGTTCAAACCAGAAAGATTTTTCCAAGAAAATAACTTAGAAATT ATACCTAATACGTATCGACCATTTGGGGATGGAAATCGATCTTGCATTGC TTATCGGTTTGCAATGATGGAGTTACAACTCATACTTGAAAAATTGGTTA AAAAATTTGAAATTCTCCCAACACATGAAACCAAAATGGTGCCCTCAAAA GGAAGCCTGTTTTTGTTTGAGGTTGAGGACATTGGAGTTGAATTCAAAGC GAGAGATTAA
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