EMLSAT00000005282, EMLSAT00000005282-701129 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000005282
Unique Name	EMLSAT00000005282-701129
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s2828	supercontig	LSalAtl2s2828:874..6765 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000005282 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000005282	EMLSAG00000005282-688048	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000023075	EMLSAE00000023075-732003	Lepeophtheirus salmonis	exon
EMLSAE00000023076	EMLSAE00000023076-732004	Lepeophtheirus salmonis	exon
EMLSAE00000023077	EMLSAE00000023077-732005	Lepeophtheirus salmonis	exon
EMLSAE00000023078	EMLSAE00000023078-732006	Lepeophtheirus salmonis	exon
EMLSAE00000023079	EMLSAE00000023079-732007	Lepeophtheirus salmonis	exon
EMLSAE00000023080	EMLSAE00000023080-732008	Lepeophtheirus salmonis	exon
EMLSAE00000023081	EMLSAE00000023081-732009	Lepeophtheirus salmonis	exon
EMLSAE00000023082	EMLSAE00000023082-732010	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto768261	auto768261	Lepeophtheirus salmonis	polypeptide
EMLSAP00000005282	EMLSAP00000005282	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s2828:874..6765-

protein sequence of EMLSAP00000005282

>EMLSAP00000005282 ID=EMLSAP00000005282|Name=EMLSAP00000005282|organism=Lepeophtheirus salmonis|type=polypeptide|length=1077bp
MAEVEADLLDXEEEDXTTTAVTTETNGAEHKKEVKGTYVSIHSSGFRDFL
LKPEILRAIGDCGFEHPSEVQHECIPQAVLGMDILSQAKSGMGKTAVFVL
ATLQQMEPVDGQVSVLVMCHTRELAFQISKEYERFSKYLPGIKVGVFFGG
LAISKDEQVLKSNCPHIVVGTPGRILALVRSKKLNLKHTKHFILDECDKM
LEQLDMRRDVQEIFRNTPHEKQVMMFSATLSKEVRPVCKKFMQDPMEVYV
DDEAKLTLHGLQQHYVKLKDTEKNRKLFELLDVLEFNQVVIFVKSVQRCV
ALAQLLIEQNFPAIAIHRGMSQEERLSRYQQFKDFQKGLAITFVSDESDA
KTLNEKKVFQDFFSXADRRMPSFLHKKSQSRSIASLIEAGTSLIGPISGR
RSHINKVDGTLESVSCSFDSHSIESRDYDSNEARYSSLDYRDVRSNSNDS
DVLRRRELPRTTCNMTNNAQRLVSPTIKERYTSSNSPINQFTSQKKSTSP
SNQKHSEVTTVKKLLEGIKPSYSFEKVSSYSFDRGWLTNLMPYIFKFFEW
MFIFALIYYDFSIAHILLCFLIYAYQIHNSETTRKLALFGKISTHEFISK
IDNESFPAWLKSSDMDXAEWINDIIAQLWPNLNRYATTFIKTFIEPELIS
MLNELQLKELSGFEIKKVLLGTIPLKIGGCKVFPRGSKSENDGIMLEMEL
IYSGDAKVQFIVQRIAAEIKNINLRGTVRIYLKPLLNTFPLIGGCEVTFM
ELPIYNYSLGGIGTFADLPGISTLCKSIVDSQIKSRVLWPNKLKIIIPTP
ETEDAILKQKSLISRPYGYLHVQLLEAENLVAKDINMVGKGSSDPYAIVV
VNGKKVSFQSQYVEKNLNPIWDYECNFILDGDLIPEDHQCEILVYDYDQG
TQDDFMGNAIINLQSVFNNLEFDHWVPLTNIKKGKVHLKMNFRECSPVLK
PQGDYILHIFIESCSNLTSNNDQPVLSSIQCSVNNNDFILSQKGKTNPEN
GIHFINEGATFYTTITEELIITVSDFKNMQKTFGEYQLSIADMINNFNGE
ITNEVLPLNFHSNSNMTLSARLYSLYD

mRNA from alignment at LSalAtl2s2828:874..6765-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000005282-701129 ID=EMLSAT00000005282-701129|Name=EMLSAT00000005282|organism=Lepeophtheirus salmonis|type=mRNA|length=5892bp|location=Sequence derived from alignment at LSalAtl2s2828:874..6765- (Lepeophtheirus salmonis)
ATGGCCGAAGTAGAAGCAGATCTCTTGGACTAKGAGGAGGAAGATMCCAC
CACCACTGCAGTGACTACTGAGACCAATGGAGCCGAGCATAAAAAAGAGG
TTAAAGGAACATATGTTTCTATTCACAGTTCGGGCTTCCGAGACTTTCTT
CTCAAACCTGAGATTTTGAGAGCCATCGGGGACTGCGGGTTTGAACATCC
ATCTGAAGGTGAGTGAGCGGATTGCAAGGAGTTAGTGCATTCTTTAATTT
CCTCCCATAGCTGAGAATTGTGCTATGGGGTGGCAGATGGGAATGCTACA
TTGATTGTACTGCGACGCACTATCTCGATCTTTATCTTGGGATCGGGCCC
GTCAATGATCAACACTTGACTAATTAGATTATTTCTTTCAGTTCAACATG
AATGTATTCCACAGGCCGTTCTGGGAATGGATATTCTTTCTCAGGCCAAG
TCTGGTATGGGTAAGACTGCTGTGTTCGTGTTGGCCACTCTTCAGCAGAT
GGAGCCGGTGGATGGACAAGTCTCAGTTCTCGTCATGTGTCACACGCGCG
AACTTGCATTTCAAATCTCGAAAGAGTACGAAAGATTTTCCAAATACCTC
CCAGGTATCAAGGTACGCTTCCATTTCCTTACATTACCTACCGTCTTTGC
TATTCAAATGATGAATTCCTTATAGATAGGGACATATGATCCTATTCAGT
GATTACCTCATTTCGCTAGTTTTCTGACAATGTAAAAATGCATCTATGTA
TATATATTATTCCATTGGGTCGTCTTCACTCTTTTTAACCGTTTGATTTG
TTTGATTTAGGTCGGCGTTTTCTTCGGTGGTCTTGCCATCAGCAAGGACG
AACAAGTTTTGAAATCCAACTGCCCACACATAGTGGTTGGCACTCCCGGA
CGTATACTTGCTCTTGTAAGGAGTAAAAAATTGAATCTGAAACACACTAA
ACACTTTATCCTCGATGAATGTGACAAAATGCTTGAGCAATTAGGTTAAT
TTCTACTCTTTATTAGTTATTTCTCTTTTTCTTTATGATGTAATTTTCGC
ACTGAGTTCTCACATTGATTTCACGTATTTGGTGAGAATTCTCAATGACG
ACATAGCGAACTCTCTCTTCCTGAATTTTTGTTTCCATGTTCTGACTTAA
ACCTATTATTGTGAAGATAAAAATTTCAACTAAATCCTTTTTATCATCCA
CAGATATGAGAAGAGATGTCCAAGAGATCTTCAGAAATACTCCTCATGAA
AAACAAGTTATGATGTTTTCTGCTACTTTAAGTAAAGAAGTTCGACCAGT
GTGCAAAAAGTTTATGCAAGACGTACGTAAAACCTTTCCCGTCGCCGCAT
CGGCTTAATGGGTCTATGATTTAAAAATGATAGTATTTTAAACAATGATT
TTTATGGAAACGCGATTAAGCGAATATTTTGGTTAAGTTTACATTGTAAC
CCTTGGAATTGATGGAGTTATGTCCAATGATTGGATACACCATTTGTGAT
AAGAGAAGGGAGGGGGAGGGGCTTTTGGTAAAGTAGGTTTAGTTGACTGG
CTTTTGGTTAATTCTTCTATCAAGAATGAAGATGTGCATAGAAGAGCACG
AAGAAACAGAAGAAAGAAGAGGGGAGGGTGGGCTGAATTATTGAAAGTCA
GTCTTATTTTTTGGGGGTAAAGTTAGATTTTTTTGTCGGCTTAAGATGGG
TCCATTGTCTTAAAAACACAACATCTACAAAGGAAATCAAGTCTTTTCCC
CGTGGAATGGCTCAAACCACATCTATTATGCCTTATATTAAGAACTCCAA
CAACTTTTGTTTTTCCTTTTTACAGCCCATGGAAGTTTATGTCGACGATG
AAGCCAAATTAACACTTCACGGTCTTCAACAACATTACGTCAAGCTTAAG
GATACCGAGAAGAACCGCAAGCTCTTCGAGTTACTTGATGTCTTGGAGTT
TAATCAAGTCGTTATATTTGTTAAGTCGGTTCAGCGTTGCGTCGCTCTTG
CTCAACTTCTAATAGAGCAAAACTTTCCTGCGATTGCTATTCATAGGGGT
ATGAGCCAGGAAGAGCGTTTATCTCGCTATCAACAATTTAAGGATTTCCA
GAAGGTAAGTTTCTTTGATGGATAGCGATAAGATTCTTCTCATGATGATA
ATTATATAGATAGGGACATATGAACTATGATGATTATTGTTCTTTCGCTA
GATAGTATCTGATTATTATTATTACTTCATATATTATTAAATTTTCCTAT
CTTCGTTATGACTTAATTTTTTTTTTTTTATTCAGCGTATTCTAGTCGCC
ACCAATCTCTTCGGACGAGGGATGGATATTGAGAGAGTCAATATTGTATT
TAATTATGATATGCCTGAAGATACTGACACTTATTTACATAGAGTCGCAC
GTGCTGGTTAGATTTGGTACCAAGGTAATTTAGTTTATGCAATATATGTC
CCTAATTTGATAGAGAACTTGATCTATTAATCAATAGTCATGCTTCTAGA
GCTTAGGGGCATATTATGATTAACTGGTCGGTTGAATCAAGAGACATATT
CTTTTTATTTTCAGATCTAGTTAGTACAATTATTTATTTTAGTGTAATTC
TATCTTAGTTAACTTAATTTGATCTTTTTATCTATTCAGGGTCTTGCTAT
TACATTTGTATCGGATGAGTCTGATGCCAAAACACTCAATGAAGTACAAG
ACAGATTTGAAGTTGATATTACGGAACTACCTGATGAAATAGACTTATCA
ACATATATTGAAGGGCGATAATTGCCTCAGAATGTTTATATATAACTTAT
ATATGTTTTCTATCCTGCTCAAATGGGATAATTTTTAGTNNNNNNNNGTT
TTTCTATCCTGCTCAAATGGGATAATTTTTAGTATCCTTATTTTTTTTTT
TTTTTMTGTAAAATWTTTATAAATTMAAWAAATTCTCCTAGGGAATCTTT
AACATTCCACTAAATTAATATTGTTGTTTTACTGATATTTAATTTGCACT
ACGGGTTTTGGTGTAGCTGAAATCTAAAATCTGGCGGGGTTACATAGTTA
ACATATTTCTTTTATATCTGTTACGTCATGAGAGTAAGACATAAGTGTGC
ACTGGTTCGGCTATTCATTGTTATTCTATCATACATTTATCTCCGAGGTC
ACTTTCCCCTGCGACACAGGCGTAAACAAGCTACTCTTACCTATTACAAC
GAAGGTATACCTTGGTATAGAAATAGAAACAACTTTAAGACTGCTCTTAA
CAGTCGTAATATTAAGACCAAAGGGGAAATATTGGACGTAGATCATTTTC
GGTTTATTTCGTTAAAGTAAATCAACCATTTCTAGTCTAAGGAATCAAGA
TAGGCAGTCCCATATGGGGAAGGTAATTTATTAAGAACAATGTTTCAACG
TTTATCCCCAGTCATTTATTTTAATTGATATATTTTCTATATCATAGAAA
AAAGTCTTCCAAGACTTTTTCTCTKCTGCCGATAGAAGAATGCCCTCTTT
TTTGCACAAAAAATCTCAAAGTAGAAGCATTGCTAGTTTAATAGAAGCTG
GAACATCTCTTATTGGTCCTATTAGTGGTCGAAGGAGTCATATTAATAAA
GTGGATGGGACACTTGAATCAGTTTCTTGTAGTTTTGATTCACATTCAAT
AGAATCTAGAGATTACGACAGCAATGAAGCTAGATATTCTAGTTTAGATT
ACAGGGACGTAAGAAGTAATAGTAATGATTCTGATGTCCTGAGGAGGAGA
GAACTTCCTAGAACTACGTGTAACATGACAAATAATGCTCAAAGGTTGGT
TAGTCCTACCATAAAAGAGCGATACACAAGTTCAAATTCGCCAATTAATC
AATTTACATCTCAAAAAAAAAGTACATCACCCTCAAATCAAAAACATAGC
GAAGTTACAACCGTGAAAAAGTTGTTGGAAGGTATTAAACCTTCTTACTC
CTTCGAAAAAGTCAGTTCTTATTCTTTTGATCGTGGTTGGTTGACAAATT
TAATGCCATATATTTTTAAGGTAAATAAAACAACATTTAATCCAGTATTT
TGCAGAAATAGTTGGTAATAATGAGTTTATAGTACGATTTTTTTGTGTTT
TTTGTAATATTTCATTATGTTATGAAATTTATTGATAATGATYCTTTCAA
TCATGTTAGATGGAACATTTCATCAATATGTACATAATATAATTTAAAAT
TTTGTATTGTTTTCTTTGTTATAACAATATGTAAATATTACATTAATAAT
TATAATTAATTAATGGTTAATTGCATATGTTTCCATTTTTTTCCAGTTTT
TTGAGTGGATGTTCATTTTTGCATTGATATACTACGATTTTAGTATTGCT
CATATTCTATTATGTTTCTTAATTTACGCTTACCAAATACATAATTCGGA
AACGACAAGGAAACTGGCATTATTTGGCAAAATATCAACTCATGAATTTA
TATCCAAAATCGATAATGAATCCTTTCCTGCCTGGCTGAAGAGTTCAGAT
ATGGATAYAGCTGAATGGATTAATGACATAATTGCTCAGCTATGGCCCAA
TTTAAATAGATATGCTACAACGTTTATTAAAACTTTTATAGAACCCGAAC
TTATTTCAATGCTTAATGAACTCCAATTAAAGGAATTGAGTGGTTTTGAG
ATAAAAAAAGTTCTACTGGGTACAATTCCTTTGAAAATTGGTGGTTGTAA
AGTTTTTCCACGAGGAAGTAAATCTGAGAATGACGGCATTATGTTAGAAA
TGGAGCTAATTTACTCCGGTGATGCAAAAGTACAGTTTATAGTTCAACGA
ATCGCTGCAGAAATTAAAAATATTAATCTCCGTGGGACTGTCCGTATTTA
CTTAAAGCCTCTCCTCAACACATTTCCTCTAATTGGAGGTTGTGAAGTTA
CTTTTATGGAACTTCCTATTTATAACTATTCTTTAGGTGGAATTGGTACA
TTTGCTGATTTGCCAGGAATCAGTACTCTATGTAAAAGTATTGTCGATTC
ACAAATTAAATCTAGAGTTTTATGGCCCAACAAACTGAAAATTATAATTC
CAACTCCAGAAACGGAGGATGCCATATTAAAACAAAAATCTTTAATATCA
CGCCCTTATGGTTATTTACACGTTCAACTTCTTGAAGCAGAAAATTTAGT
GGCTAAAGACATAAATATGGTTGGAAAAGGATCTTCGGACCCGTATGCAA
TAGTTGTTGTTAATGGAAAAAAAGTATCTTTTCAATCTCAGTATGTTGAA
AAAAATCTCAATCCTATTTGGGATTATGAATGCAATTTCATTCTTGACGG
AGACCTGATTCCAGAGGATCATCAGTGTGAAATCCTCGTGTATGACTATG
ATCAAGGAACACAAGATGACTTCATGGGTAACGCAATAATAAATCTACAA
AGTGTTTTCAACAATTTAGAGTTCGATCATTGGGTTCCCTTAACCAATAT
CAAGAAGGGAAAAGTTCATTTAAAAATGAATTTTAGGGAATGCTCTCCAG
TCTTAAAGCCTCAAGGAGATTATATTCTTCACATCTTTATAGAAAGTTGT
TCTAATCTTACTTCTAATAACGATCAGCCTGTATTAAGCTCCATTCAATG
TTCAGTGAATAATAATGATTTTATCCTGTCCCAAAAAGGTAAAACTAATC
CTGAAAATGGAATTCATTTCATCAATGAGGGAGCTACATTTTATACTACT
ATAACTGAAGAATTAATTATCACTGTGAGCGATTTCAAAAATATGCAAAA
AACATTCGGAGAATATCAACTAAGTATAGCAGATATGATTAATAATTTTA
ATGGTGAAATAACAAATGAAGTTTTACCCTTGAATTTTCATTCCAACTCT
AATATGACTTTATCTGCAAGGCTTTACTCTCTATATGACTAA

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