EMLSAT00000005304, EMLSAT00000005304-701151 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005304
Unique NameEMLSAT00000005304-701151
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s282supercontigLSalAtl2s282:540754..541176 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005304 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005304EMLSAG00000005304-688070Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023163EMLSAE00000023163-732091Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778485auto778485Lepeophtheirus salmonispolypeptide
EMLSAP00000005304EMLSAP00000005304Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005304

>EMLSAP00000005304 ID=EMLSAP00000005304|Name=EMLSAP00000005304|organism=Lepeophtheirus salmonis|type=polypeptide|length=140bp
MMYLRQLDRSLDLRQNYRQVSSITSKIQSFLSDGLVHQQFSLLQETLYLT
VCINDYYLQEEGGNTQKKILXLVGVPAIFFASKYKEMSYSEVCDFVFITD
NMYTEHQIRTMEIKRPLTLNFELGRPLPFTSYAVVVKPAF
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mRNA from alignment at LSalAtl2s282:540754..541176+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005304-701151 ID=EMLSAT00000005304-701151|Name=EMLSAT00000005304|organism=Lepeophtheirus salmonis|type=mRNA|length=423bp|location=Sequence derived from alignment at LSalAtl2s282:540754..541176+ (Lepeophtheirus salmonis)
ATGATGTACTTGAGACAGTTGGATCGATCTCTAGATCTTCGGCAGAACTA
TCGTCAAGTAAGCAGCATCACCTCTAAGATACAAAGTTTTCTCAGCGATG
GGCTCGTGCATCAGCAGTTCAGTCTTCTTCAGGAAACTTTGTACCTTACC
GTGTGCATCAATGATTACTACTTGCAGGAAGAGGGTGGAAACACGCAAAA
GAAGATCCTTCAKCTCGTCGGAGTSCCTGCCATATTCTTTGCCTCAAAGT
ACAAGGAAATGAGCTACTCTGAAGTTTGCGATTTTGTCTTCATCACGGAT
AACATGTACACTGAGCACCAAATCAGAACCATGGAAATCAAAAGGCCTTT
GACTCTTAATTTTGAGCTTGGAAGACCCCTTCCCTTCACTTCCTATGCCG
TTGTAGTAAAGCCGGCTTTTTGA
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