EMLSAT00000005338, EMLSAT00000005338-701185 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005338
Unique NameEMLSAT00000005338-701185
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s287supercontigLSalAtl2s287:186065..187108 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005338 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005338EMLSAG00000005338-688104Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023310EMLSAE00000023310-732238Lepeophtheirus salmonisexon
EMLSAE00000023311EMLSAE00000023311-732239Lepeophtheirus salmonisexon
EMLSAE00000023312EMLSAE00000023312-732240Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774114auto774114Lepeophtheirus salmonispolypeptide
EMLSAP00000005338EMLSAP00000005338Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005338

>EMLSAP00000005338 ID=EMLSAP00000005338|Name=EMLSAP00000005338|organism=Lepeophtheirus salmonis|type=polypeptide|length=301bp
MMNGALRSTSKLLLSNASPLHNVGXRGAAQAATSQEGVTGLRTDKVKTFA
IYRWNPDNPGEKPKVQEYKVNLSDCGPMVLDALIKIKNEIDPTLTFRRSC
REGICGSCSMNIGGVNTLACITKIDPNPAKAIKIYPLPHMYVVKDLVPDM
NNFYEQYRSIQPWLQREDESSTSEGNLQILQSVEDRAKLDGLYECILCAC
CSTSCPSYWWNGDRYLGPAVLMQAYRWMIDSRDSATHERMDKLRDPFSVY
RCHTIMNCTKTCPKGLNPGKAIAEIKKLLGGVADKGKPGLXGTXXITXAS
S
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mRNA from alignment at LSalAtl2s287:186065..187108-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005338-701185 ID=EMLSAT00000005338-701185|Name=EMLSAT00000005338|organism=Lepeophtheirus salmonis|type=mRNA|length=1044bp|location=Sequence derived from alignment at LSalAtl2s287:186065..187108- (Lepeophtheirus salmonis)
ATGATGAACGGAGCTCTTCGAAGTACATCCAAATTGTTGTTGTCCAATGC
GAGTCCTCTTCATAATGTTGGCGTGAGTTTTAACATCTTGTATTTTTTGG
ATGAAMGACGGAAATATCCAATATTATATTTACTCTTTAGCMGAGAGGCG
CTGCCCAAGCCGCTACTTCCCAGGAAGGAGTAACTGGCCTAAGGACGGAC
AAAGTAAAAACCTTTGCCATTTACCGCTGGAACCCTGATAACCCTGGAGA
GAAGCCCAAGGTGCAAGAATACAAGGTGAATCTAAGTGATTGTGGCCCCA
TGGTTCTTGATGCTCTCATTAAAATAAAAAACGAAATTGACCCAACCCTC
ACATTTCGTCGCTCTTGTCGTGAAGGGATTTGTGGTTCCTGCTCCATGAA
CATTGGTGGTGTCAACACCCTTGCCTGTATTACCAAAATCGATCCCAATC
CGGCTAAAGCCATCAAAATCTACCCTTTACCTCATATGTACGTTGTTAAA
GACCTCGTTCCTGATATGAACAACTTCTACGAACAGTATCGTTCCATTCA
ACCCTGGCTCCAACGTGAGGATGAGAGCTCTACTTCAGAGGGAAATCTTC
AAATACTTCAATCTGTTGAAGACAGAGCCAAGCTTGATGGTCTTTACGAA
TGCATTCTTTGTGCATGTTGTTCCACGTCTTGTCCATCTTACTGGTGGAA
TGGAGATCGCTACTTGGGACCTGCTGTTCTTATGCAAGCTTACAGGTGGA
TGATTGATTCAAGAGATAGTGCAACCCATGAGAGAATGGACAAACTCAGA
GATCCCTTCTCGGTCTACAGATGCCATACCATTATGAATTGCACTAAGAC
GTGTCCTAAGGTGCGTAATTATCTTCATTACTAGCTTCTTTAGCCTTAAA
ATTAATGCATACTTTTTATTCATTACTTAGGGATTAAATCCCGGTAAGGC
CATTGCTGAAATTAAAAAGCTCCTTGGAGGTGTTGCAGATAAAGGAAAAC
CTGGATTGGAMGGAACRSCACKAATTACGKAAGCCAGTAGCTAA
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