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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s289 | supercontig | LSalAtl2s289:230955..236378 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000005359 >EMLSAP00000005359 ID=EMLSAP00000005359|Name=EMLSAP00000005359|organism=Lepeophtheirus salmonis|type=polypeptide|length=328bp
MNVSGGLSGTGGGPSNMEINANLIPTSLGKRKXESSSKYLGSSFSPPNGH
HHDLNSEDSAFKKLKIVQDGLINHHSSTAVTCPTPARRRHRTTFTQEQLQ
ELETAFSKSHYPDIYCREELARSTKLNEARIQVWFQNRRAKXRKQEKQLQ
KALXASPSLPQCNNSIMRNLYHHNSTSQQPRNYTHYSHPSTPSRYPPQVD
ERHFLPGYDSALFYGAYAYHQYDREGSNRSYSEESYRRIVQDFNADEVGS
NKGTNSYASSPVVSPDMIPSQIVVYPSLQKSSGNSSNAGDDPSSSSSFCS
PTTPFSFSSYSNNDCQKPPIVDEKAEAN back to topmRNA from alignment at LSalAtl2s289:230955..236378- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000005359-701206 ID=EMLSAT00000005359-701206|Name=EMLSAT00000005359|organism=Lepeophtheirus salmonis|type=mRNA|length=5424bp|location=Sequence derived from alignment at LSalAtl2s289:230955..236378- (Lepeophtheirus salmonis)
ATGAATGTGAGTGGAGGGCTATCCGGGACTGGTGGGGGTCCTTCCAACAT
GGAGATCAATGCCAATCTCATACCCACATCCCTAGGAAAACGGAAGGKTG
AGAGTAGTAGTAAGTACCTCGGATCCTCATTTTCACCACCCAACGGTCAT
CATCACGATCTGAACTCCGAAGGTAAGAACGAATTTCAATCGAATGATTT
TATTCATTTATTTGATTTAATTTAAATCATTATTTTAATATATTTACGTA
GTAATTGTTAAAGTAAATTGTCTCTAAAGTCATATATAGCAGGCACGAGC
AATACACTTTTGGAAGTAAGCGACATATCTTTAAAGTGTAGGGTTATGTA
GCGGACAACTAGCGGCTTTTATCATAAAGCGAGAAAAATAGAATGAAAGA
CCGACGGAGGGAAAGAACATTCACTTCTATTTGCCTCATTGGGGAGTCTA
TTTATGCCCAAATATCAGGGACTTTATTACTAATTTTTAGACGTACATAT
TCATAATTCAATTAAAAATCCCTCAAAATACTTTTTTTTCCCCGTAAAAA
AAAAGTAAAAAAAATAGGAAGGACAATAATAATAATCAGCCATTTTAAAT
CAATATATATAGACAAATCATTATAATTACTAATTAATGTATAACACCTA
ACAGATAGCGCTTTTAAGAAATTAAAGATAGTTCAAGATGGTCTCATCAA
TCAYCATAGCTCCACAGCCGTTACCTGTCCAACCCCTGCTCGAAGAAGGC
ATCGAACCACTTTTACTCAAGTAAGTACACATTTATCTTTCCTTCTTTGT
AGATACGCATAAAAGCCGTATTTCTTACTTTTATAGGAACAATTACAGGA
GTTGGAAACAGCCTTTTCCAAATCCCATTATCCTGATATCTACTGTAGAG
AGGAACTAGCTCGCAGTACTAAATTAAATGAAGCTCGAATCCAAGTAAGT
ATATTACTTTTACAGATATATCTGTGTAGGTATGTAACTCATTATTAAGC
CACTCAGCACAAAAGTAAGCTAGAAGAACTTTTCTCAAAATTGAGTCGGG
ATTACCTTTGTATTCTTCGACAAATATTCGGCAATTTCTATCAACAAATT
ATTACTATTAAGAAACCTTTGAGTGAGCCCCAAATTCTACTTTTAGTGGC
AAAAAGTTGACTCTCACAATCAAATAATGAGAAACGAATATATATATTTT
TTAAAACTCCATATCGGGGCCAATATAAGTAAGTCTCTTGAACCAAATGA
AGGTTTTAAACTATAGCTAAAATTCTTGGGTATCTTAATTCATTCCATAA
ATTTGAATACAATGCCGATAATGGACACAAAAATTAATAATTTAAGATTT
TTTTATGTTATGTGGCCCGTGAACAAAAAAAATCTATTTCTATCAACAAA
TTATTCATATTAGACCTTTGGGTGAGTCACAAATTTCATTTCCTTTAAAA
AGCCAGTTCGGGGTCAATATACGTATTTTAATTCATATAAGGTTTTTAAA
CTATAGATATAATTTTTGGTTATCTTAATTCATCCCATAAATTTGAATAC
AAGGCCTATAATTGACACAAATATCAATAATTCAAGATTGTTTTATGTTG
ATTCATCATTTATGTGGCCCATCAACAAAAAACAAAGTAAAATGATTTTT
CTCAAAATTAACATACGATTTGTATGTGTGTTTGAGTCTGGGGTGGTATT
CTTCGACGAATATTTGTCAATTTCTATGAACAAATTATTCTTATGAGCGC
ATTGGCTGAGTCGCAAACTGCATTTAAAGTAGCCCAAAATTGATCGTCAA
CGTAAAATAATGTTAAATTGATGGATTTTATGGCTGAAATGAGCGATATC
GGGGAGAATTAGGTTTCTTTCATCATTTTAAAATATAGTTGCAACTTTAA
AGGATCTTACCTCATCCCGAAAATTTGAATAATAAGCCTATAAGTTACTT
AAATATGTGCATGAAATATTGTACCGTATATAAGAAGTAAATTTTTTTTA
ATATTTCCATCATGTTTATTCAAGAGTGTTTGAATGCTGACGGACCACAT
ATGTAGGTGTGTAACTAATAAATAAGACACACATCAAAAAATAAAATAGG
TATATAAAATGAAAATAAAAAGCCAAGTAACTTTTTAGTACAAAAARTAA
AAGAGAAGGATTACGAAAAAWAARAAAAWAARAAAAAAACCATNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGGAGGT
GGAGTTAAGAAAGTTTTTTGTTATTATTTTTTTCCGTTGATGGTGTATTA
CTTAAGAGGCTTTTTTCCCCTTCTTCATTTCCAAGAATATTTTTACTTTT
TTCTTCTTTTTGCTATGAAAAGAAGATAACAAAAAACCTTGTTATCTATC
CAATTATATGAAATTCGGTCATGATGAATTTCAAATATGATTATAAAGCT
TTATAGAATAAAATTGTATACCTATAAGTACATATAGAGTAAGTAGGTAC
ATAATTTATTACTAAAAGAGAAAAAGGAAGCTAGGGGATATAATAACAAC
ATTGTAAATGCGATGAATTAAATTATGGATATAATTTAAAAAAATATGAC
ATTGGAGGCGGKGCGATACTTTTGGTAGTTGCAAATCTGAGCAGTGTTTT
TATTTTCCGAAGCTGTTTTCATTAGGGAGGTAAAAAACAGGGCTGGGGAC
TCGGTAAAATGTCGGGGKGAGTCCTTAGTTCGATTTGAACTTCAAAACCA
AGTCCCGAGTCCAACTTGAACTTCAAGACCGAATCCCAATAAGTGTTGCC
GGGGGGGTTTAAGTTAAATAGGCTAAAAATCGACTCGTTTCAACAACAAC
CACCTAAAAATTCAGGTGATTATATTTTAGGGTTTATGGCTTTAGTGGTT
TAATTTTTAGGCATCCTTAATGTATCATTTTTCAAAAATTCGGAGCAAGG
AAAAGGCTGTTTATTTTTTGCTTAATAATATTGAAAAATCCGTTAGGGTG
TCCATAAAAGAAAAAAATACTTCTTAACCCAATGTTCTTGAAAGTACATT
GCCATCCACAGTCTTTTTTTATTTTTTTAAAAGTATGGGTACAACTTTTT
TTTTGTCAAATTTTAGAGTTACATTCCCTGGAAGAGACTAGATTTTGACG
AATATTTTTTTTTTGTTTTTAGAAAAGACAAATGGATTTTTATTAAATTA
TATGATAATGCTAAAATTTCTCAATTAGGGGATGATGGCTTCAGAAAAGG
CACACTTAAAAACATGYTATCCATAAGGTCGATCCAACCCTGGATGTACT
GTGAGTTAATGAATGGGGGAAAGAATTGTTAGATGATGTAAAATTTTTTT
TTTTCTTTTTTTGTCTCAAGGAAAAAGACTAATAATAGTGAACATATTCT
TTTGCTATTATTTTAGTTTACAAGAATTCGATGGATCATTTACTTTCAGT
GGCCTACACGAATAATTAATTTTAAAATCTGTGGGGAAATAAATAATGAA
TGATTCACAGTAATCTATCTATGCAAATGAATGTTTATCAAAACCGTACT
GAGATGTGAGCTATAAAATACAACCTTCTACAAGCTTAGTCCTAGTCAAT
TCCTTGATAATTATTTAAATAACCTTCAGCCAATGAAAGGTTAAAAAATG
AATAAGTAAGGAAATAAAATTTTTGTTTACAAATTTTATCATTACAGTAC
AGTAATAAATAACCTTAAAATAAATTATATATCCTTAGTAGTCTGACGTA
ATTTATAAGTAGGAATTGAACATTCTTATTGATAATAGCTATATATTTCT
ATTTTCCAAAATATTTATTTTATCTATGACTCTTTTACAGATTAATTTTG
AATTATAATTATTTTGTTAAATACTAATTCATTTGAATTCAAAAGAATTA
CTGTATTTTTCAATAATATAAATCAAATCTTGACGATAAAATTGAGGTCA
ATAGCCCATATAGTCAGAGGCCTTTGAAAATAATTTGATTACCTGAATCT
TTTTTGGTTTCTCAAAAATAGTAGGGCAATTGGCCCACTTCCTGCACGTA
ATACTTATCGTATAACGTACGGACATTTACCTTTTTAGGCAGCATATAAT
ATATTAGATATAGATTTGAAGAGTTATAGAGGTTTGATGCAAGCATAACT
TACATTGCCTTGAGAAATAATTTGATTATTAACCTTTTAAAAGCTCTAAA
TCCACTACGGTACTAAAGAAATCAAAGCAACGTTTGGATATATCTGTTGA
GGTTATTTGAGTATTTTATTGTAGAAAGTGAAAAAAAATTAGTAAATTGA
AAAATGAGAACTTTTCAAATTTACCAAAAATAACAAACCTTATCTCAAGT
GAGTTTCGTACCTAAATAGAATATTACCCATTATAATTAATTCATGTTCA
TAATAATGTCTAATGAATAAACCCCATTGCGCAGGTCTGGTTTCAAAACC
GACGAGCCAAATMCCGWAAACAGGAGAAGCAACTACAGAAGGCCCTCMCT
GCCTCCCCATCTCTTCCACAATGCAACAATAGTATCATGCGGAATTTATA
TCATCATAACTCAACGTCTCAGCAACCTCGGAACTACACGCATTACTCCC
ATCCTAGTACTCCTTCGCGCTATCCCCCACAAGTTGGTAAGTATTGGAGT
CCATGGGTCTATATGTAGTAGATAATCCCTTCATTCATACCGAGTCTTTC
TCCATTACTAGATGAGCGCCATTTTCTCCCTGGTTATGACTCTGCTCTCT
TCTATGGAGCCTATGCCTACCACCAGTATGATAGAGAAGGCTCAAATCGA
TCCTATAGGTGAGTGTATTCTTTCATATTCCAGCGAGTAAATGAAGTTAT
TATTCCGTTTGATGGTACGAGGATACATATATATATATATATACTTTTGT
ACATGTCTGTGTGTATAACTCACTTGGGATTCCGTCTCTTTGTATAGAAT
TTCAAAAGAGATACACTCATACTCATAGAAGCAGCAAACACGAAAAAGAA
AGATGCTATGCATTTCAGAAGTTAAACATCATAGAAAATTAGATATACAT
ATTCAATATTCTATCTGTCTATTCCTATGTAGTGAGGAAAGCTATCGACG
GATCGTGCAAGACTTTAATGCAGATGAAGTTGGGAGCAACAAGGGTACAA
ATTCATATGCGTCCTCACCCGTCGTCTCTCCTGACATGATTCCCTCACAA
ATCGTCGTGTATCCATCCTTACAAAAATCCTCAGGGAACTCTTCGAATGC
TGGAGATGATCCCTCTTCATCCTCTTCCTTCTGCTCACCAACGACACCCT
TCTCTTTCTCATCCTATTCAAACAATGACTGTCAGAAACCACCGATTGTC
GATGAAAAGGCTGAGGCCAACTAG back to top
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