EMLSAT00000005370, EMLSAT00000005370-701217 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005370
Unique NameEMLSAT00000005370-701217
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s28supercontigLSalAtl2s28:12099..13294 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005370 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005370EMLSAG00000005370-688136Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023448EMLSAE00000023448-732376Lepeophtheirus salmonisexon
EMLSAE00000023449EMLSAE00000023449-732377Lepeophtheirus salmonisexon
EMLSAE00000023450EMLSAE00000023450-732378Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769015auto769015Lepeophtheirus salmonispolypeptide
EMLSAP00000005370EMLSAP00000005370Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005370

>EMLSAP00000005370 ID=EMLSAP00000005370|Name=EMLSAP00000005370|organism=Lepeophtheirus salmonis|type=polypeptide|length=136bp
MAADCAVELRNKNVTMVSIWPGPVKTEEITNRVLENSKALDGMKRIFETG
ESTEFTGMAIVKLASDPCKIQCTGKVLLTSCLARKYGITDLNGTITGDMF
SIKNILQIRGYNWISSLIPSFITVPTFFIHYLSNKF
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mRNA from alignment at LSalAtl2s28:12099..13294+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005370-701217 ID=EMLSAT00000005370-701217|Name=EMLSAT00000005370|organism=Lepeophtheirus salmonis|type=mRNA|length=1196bp|location=Sequence derived from alignment at LSalAtl2s28:12099..13294+ (Lepeophtheirus salmonis)
GTAACAGGGGCCTCTCGAGGTATTGAAAAGGGACATCACTTCAAATTGGT
GAAGCCGGAGCAACCATTTATATTACTGGTCGATCAAAAAATGACTTGGA
AAAAACGGCCAGTGAAATTAAGAAGAGGGGAGGCTCTCCCATCCCTGTTC
AATTAGATCACAACAATGACTTGGCTGTGGAGCAGTTTTTCGAAAGAGTT
AAAAATGAACAAAATGGTCAGTTGGACTTGTTAGTAAACAACGCATATTC
TGGAGCTGAGATCATTAATGAATGCATGGGAAAATCGTTTTATGAAAGTC
CAACTCCTGATTTGTGGGATAAAATCAATGGTGTTGGTTTGAGGAACCAC
TATCTTTGTACTGTTTATGCGTCAAGGTAATCATTTGTTTTTATTAAATA
AACTCATTCTCAAAAGATTGAACCATACATATTTATGACTAAGTGTAATT
AAGGATCATGGTAGAAAATAAAACTGGTCTGATTGTGAACATCAGCTCTA
TTGGTGGACTCAAGTACTTATTTAACGTTTGGTAAGGCAGCATGTGATCG
AATGGCTGCTGATTGTGCAGTGGAACTTAGAAATAAGAATGTTACAATGG
TTTCTATTTGGCCAGGTCCTGTGAAAACTGAGGAAATAACAAATAGGGTT
CTGGGTTCGTATACACGGATGTTCCATCAAAGATATATTTAATTTGCTAA
TAATATGTTTCACTCTCTAGAAAACTCTAAGGCACTGGATGGTATGAAAA
GAATTTTTGAAACAGGAGAATCAACAGAGTTCACGGGGATGGCGATCGTC
AAATTAGCATCTGATCCATGTAAAATTCAATGTACAGGGAAAGTTCTATT
AACAAGTTGTTTGGCAAGGAAATATGGAATAACGGACTTGAATGGTACAA
TAACAGGGGATATGTTTTCAATTAAAAATATTTTACAAATACGTGGCTAT
AATTGGATTTCATCCCTGATACCATCCTTCATTACCGTTCCTACGTTTTT
CATTCATTATCTATCTAACAAATTTTAAATAGTGTATCAGAGAGAATCAG
TGCAATTCACTCCATTTTGTTAATGTATAAGGAATTAAATAGAACAATGG
CTTTAAATCCATTATTTTTGTTTCTTGGTTTAATATGTTCTTTTGTTCTC
AAATTTTTTAAGTAATTCTATAATTCGGTCTACGTTAATACAAATT
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