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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s28 | supercontig | LSalAtl2s28:136065..140303 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000005372 >EMLSAP00000005372 ID=EMLSAP00000005372|Name=EMLSAP00000005372|organism=Lepeophtheirus salmonis|type=polypeptide|length=1022bp
MVRSCSAPGCRSGRTLEKPKPSFFLFPLNPARRRVWSDAFPKSNYNPSKN
SVLCEKHFTDDDFETMRKDSKESRRKQRGPLKNKKLKVGAVPSIWDESLV
KQSVSPIFMNFVDVNTGTMEDSKSKSLIHFPFQHQQMSSGKGSSPKTKLI
FPTSTQRPPRKILPKPPIVSSSLEVNHKTNIEGDHCYTALTVNMDEDHCY
AFHNIKKEKWEEGDEIVSMYDFEYKIEKAQLPSGVKIFRKDSKYYFYLPN
FQEDGNAKIGFSLELLDNFKYNAFVNGIKILRDDIKLSFNAKITKISELI
LLLEYLKSKSEGMPNSSFLICQAKKNLEKCIEISDEGHSSLISKLLFLKE
QCDLLLSKSHKYSDSLLSVALMWHQQAPTLYEQIRKDGVMTLPSASHLRR
FTSFNAESGLPSNTVSYLRSRFDNLTDVEKVIAIVFDEFYVVRKFEFSRG
RLQGKNNENIPKSSFSLMIKSIAGSYRDIVYTSSKSSIKAQTIYDVYMAA
LKALTDIGFRVVAVISDGNSSHIHFFKDKIFNGSLLPIVENPFDPAIKIH
IIFEQSTILKNFYHSFLSKKILYCPAFDDFNKFLSPNFDDLKILYQLEDN
KSVKISHYLEDKCLSPSPVEKSNFRLGCAIFHESTIKSLECHTTLEHDFS
ETISFARVIFNWWDLCNLKTIYSFLVAKNTVAEKEWFDYMDKFSTWLKAW
KSNPSINSTLNPDIFESVNHNSQSIPKLAQYLLEFFATEGILFETMVRDS
IEDGVTHFSQFSGRNFNASVGQLLGMETKVRLTSLIKFSHVNIEPPETEE
PNENLSGMDECVISKIVGRSDQFVSQSVSGDSCLNFYIAGCIARMISRTL
KCNSCLELIIFSSFLPIEIIKDDCEMENKETFIDQISNNLINYPTDLFFY
TVIIANCLYQTISSDDEINKELKYSPNSETVFSQTFVRSCFDNVNYGLSE
QKCTKGHSYRYIAEKVALHIFNIGARNHFEEFFNLIYCQIVRNSVGDEDM
EGEEEEDGEESETYIVETIEAE back to topmRNA from alignment at LSalAtl2s28:136065..140303+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000005372-701219 ID=EMLSAT00000005372-701219|Name=EMLSAT00000005372|organism=Lepeophtheirus salmonis|type=mRNA|length=4239bp|location=Sequence derived from alignment at LSalAtl2s28:136065..140303+ (Lepeophtheirus salmonis)
TGCTGTTGGACACCATACTCAGCGCCCAAGCAAAGCTGGAGCTAGATCAG
CAGCAATTGAGGCTTGACATCAGCTGTATTGACGTCAAGAACCCGCCCCA
ATTAAGGAATTAATTTCGTCTTCTCATTGCCTTCGTATTGTAATTGTTTT
TTTTTTACGGATCCAGCAGCTTGGATTTGGGTCTTTCTCTTGCTACTCTG
TTGTAGGCTGAGTGAATTCTTTTGGTGTTCCTTCCTCTCTCCTCCACACT
CCCAAGACTGGATTCCCATTCTTCGTGTTGACCTGAATGTGATGTCGTCG
AAAATGGAACTTGTGTCTGGACTGTTTTGGAAAGGAATGAGGCCAATTTC
GTGGAAGGAGCATGAATATTAATGAGAATGTCAAAACGAAATGTGGGACT
CCGATTCACTATTAATTGATATGAATGGAAATGCTGATTTGTGCTTTTTG
CTTTTGCAGATGTGGATGGMGGTGATGTTGTGAAAAATGGTTCGCTCCTG
TTCCGCTCCTGGATGTCGAAGTGGTAGAACGCTAGAAAAACCCAAACCCT
CATTTTTCCTCTTTCCTTTAAACCCAGCGAGGAGACGCGTCTGGTCGGAC
GCCTTCCCCAAAAGCAATTACAATCCATCAAAGAACTCTGGTAACTCCAC
TCCAAACACCCTCACAATAAATGTATTCCCTTCTTTTATTTCTATTCCAG
TCCTATGTGAGAAACACTTTACGGATGATGACTTTGAAACCATGAGAAAG
GACTCCAAAGAATCTCGCAGAAAGCAACGTGGTCCATTAAAAAACAAGAA
ATTAAAAGTTGGAGCAGTTCCTTCTATTTGGGATGAATCCCTAGTAAAGC
AGTCCGTGTCGCCCATTTTTATGAATTTTGTAGACGTTAACACTGGAACA
ATGGAGGACTCCAAGTCCAAATCCCTTATTCACTTCCCTTTTCAGCATCA
GCAAATGTCAAGTGGGAAGGGCTCCTCTCCAAAGACAAAGTTAATATTTC
CCACATCCACTCAACGACCCCCTCGTAAAATTCTCCCTAAGCCACCTATT
GTCTCTTCTTCTTTGGAGGTCAATCATAAAACGAATATTGAAGGGGATCA
CTGCTACACTGCACTTACTGTGAATATGGATGAGGATCACTGCTATGCAT
TCCATAATATAAAAAAAGAGAAATGGGAGGAGGGTGATGAGATTGTGTCA
ATGTACGATTTTGAGTATAAGATCGAAAAGGCTCAACTTCCCTCAGGAGT
GAAGATATTTCGAAAGGACTCAAAGTATTATTTCTATCTTCCGAATTTTC
AAGAGGATGGAAACGCAAAGATTGGTTTCTCTTTGGAACTCTTAGATAAC
TTTAAATATAACGCCTTTGTGAATGGAATTAAGATCCTTCGCGACGATAT
CAAACTGTCATTCAACGCCAAAATCACGAAAATTTCCGAACTGATCCTGC
TCCTTGAGTATTTAAAGTCAAAATCAGAGGGTATGCCCAATTCCTCTTTT
TTGATTTGCCAGGCTAAGAAGAACCTGGAAAAATGTATTGAGATTTCTGA
TGAAGGGCATTCCTCTCTCATATCCAAACTCTTATTTCTGAAAGAACAAT
GTGACTTATTACTGAGTAAAAGTCACAAATATTCGGATTCATTACTCTCG
GTAGCTCTAATGTGGCATCAACAGGCACCTACTCTCTATGAACAGATCCG
TAAAGATGGGGTTATGACATTACCTTCAGCTAGCCATTTACGTCGCTTTA
CATCTTTTAATGCGGAAAGTGGACTTCCTTCTAATACGGTCTCTTATCTG
AGATCTAGATTTGATAACTTAACAGATGTGGAAAAAGTGATTGCCATTGT
GTTTGATGAGTTTTATGTCGTAAGGAAGTTTGAATTCTCGAGAGGAAGAT
TGCAAGGGAAAAATAACGAGAATATTCCTAAAAGCTCATTTTCACTTATG
ATAAAGAGCATTGCGGGATCGTACAGAGACATTGTCTACACGTCCTCAAA
ATCGAGTATAAAGGCACAGACCATATATGACGTGTACATGGCTGCATTAA
AAGCTTTAACTGACATCGGGTTTAGAGTGGTTGCAGTCATATCTGACGGG
AACTCTTCACATATTCACTTTTTCAAGGACAAAATATTTAACGGAAGTCT
TTTACCTATCGTCGAAAATCCTTTTGATCCCGCTATCAAAATCCATATCA
TTTTTGAACAATCCACAATACTCAAGAATTTTTATCATAGCTTTTTGTCT
AAAAAAATTCTGTATTGTCCAGCATTTGACGATTTTAATAAGTTTCTTAG
TCCTAATTTTGACGACTTGAAAATTTTATATCAATTGGAAGATAATAAAA
GTGTCAAAATATCGCATTATCTAGAGGACAAATGCCTTTCCCCGTCCCCC
GTGGAGAAATCAAATTTTAGACTAGGCTGTGCTATATTTCATGAGTCTAC
TATTAAGAGTTTAGAGTGCCACACCACCCTGGAACATGATTTTTCTGAAA
CAATATCATTTGCTAGAGTCATTTTTAATTGGTGGGACCTGTGTAATCTG
AAGACCATTTATTCATTCCTTGTAGCAAAAAATACTGTGGCTGAGAAGGA
ATGGTTTGACTACATGGATAAATTTAGCACTTGGCTGAAGGCTTGGAAAA
GTAATCCGTCGATAAATTCAACCCTTAATCCAGATATTTTTGAATCTGTG
AATCATAATTCCCAGAGCATACCAAAACTCGCCCAATATCTACTCGAGTT
CTTCGCCACGGAGGGAATACTTTTTGAAACAATGGTTAGAGATTCCATTG
AGGATGGTGTTACTCATTTTAGTCAATTTTCTGGTCGAAACTTCAATGCC
TCTGTCGGACAGCTTCTTGGAATGGAAACTAAGGTTCGATTGACCTCTCT
CATTAAATTTTCGCATGTAAATATTGAGCCCCCTGAGACTGAAGAGCCGA
ATGAAAATTTATCAGGAATGGACGAATGTGTCATATCAAAGATAGTGGGT
CGTTCGGATCAATTTGTATCACAGAGTGTGTCTGGMGATTCCTGTCTTAA
TTTCTATATTGCAGGATGTATTGCTCGCATGATTTCTAGAACATTAAAGT
GTAACTCCTGCTTGGAACTCATTATTTTTTCCAGCTTTCTTCCAATAGAA
ATAATAAAAGATGATTGTGAAATGGAGAATAAGGAGACGTTCATAGATCA
AATTAGTAATAATTTGATTAATTACCCGACTGACTTATTTTTCTATACTG
TTATCATTGCTAATTGCCTTTATCAAACCATCTCATCGGATGATGAGATC
AATAAGGAACTCAAATATTCACCAAACAGTGAAACAGTTTTTTCACAGAC
ATTTGTTCGAAGCTGTTTTGATAATGTCAACTATGGACTATCTGAACAAA
AGTGCACTAAAGGGCATTCCTATCGATACATAGCCGAGAAAGTAGCCCTT
CATATATTTAATATAGGAGCCAGAAATCATTTTGAGGAGTTCTTTAACCT
AATTTATTGTCAAATTGTTAGAAATAGTGTCGGAGATGAGGACATGGAGG
GCGAAGAAGAAGAGGATGGGGAAGAGAGCGAGACTTATATTGTAGAAACA
ATTGAAGCCGAATAGAGGTTTGGCCCTACCACATACCCAGATGTACATTA
AGCGGATACTAATCACTATTCGTTTAATTCGTCGTCGTTGTTGTTGTTTT
AAATTAAAAAAATATAGTTTGCGCGAGTTGTGGCTCATCTTTGAGTACTC
CATAAGTGACAAGTGCATATTCTATTAATATGTAAATTGCTTTAATGATA
ATTCAAAAATTGATATGTTAGTGAACTTGATTTTTTCCCCTCAAAAAATA
TATTTATTTATGAAGAATCTTCAACATTTTGCGAACAAAAATACATAATA
TATCACGCTAATATTAGTATTTATTTTTTCATGTCAACTTTGATTGACAC
TTCATACTATATGTACGTTCCAATTGCGTGCCACCAAGAGAGAGAGGGTG
TGTGTGTGTTTCTGATTAGACGATATAAATTAAATTGAAAAATCGTCAAT
ATTTGTTGTATTTCTAAAACCTATCATTTGGGCCATCAATAGTATGAATG
CATAAGTAAATTTACCATGTTATATTATATTTTATATTGGCAAAAGTATA
GATACGTTGAGTTACGTCATTAAATGAACTTTCTCTCGTTTGAATGATCA
CACTTTGGGTTCTTTATTAATAAAAATAATTATTATCAA back to top
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