EMLSAT00000005422, EMLSAT00000005422-701269 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005422
Unique NameEMLSAT00000005422-701269
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s292supercontigLSalAtl2s292:310566..310938 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005422 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005422EMLSAG00000005422-688188Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023666EMLSAE00000023666-732594Lepeophtheirus salmonisexon
EMLSAE00000023667EMLSAE00000023667-732595Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776203auto776203Lepeophtheirus salmonispolypeptide
EMLSAP00000005422EMLSAP00000005422Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005422

>EMLSAP00000005422 ID=EMLSAP00000005422|Name=EMLSAP00000005422|organism=Lepeophtheirus salmonis|type=polypeptide|length=88bp
MAPTAFFFKFKKRKKKEVEDQEEEKYFDDKYEYRHVMLPKELAKLVPKTH
LMSESEWRNLGVQQSQGWVHYMAHEPEPHILLFRRPMT
back to top

mRNA from alignment at LSalAtl2s292:310566..310938-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005422-701269 ID=EMLSAT00000005422-701269|Name=EMLSAT00000005422|organism=Lepeophtheirus salmonis|type=mRNA|length=373bp|location=Sequence derived from alignment at LSalAtl2s292:310566..310938- (Lepeophtheirus salmonis)
ATGGCGCCCACCGCCTTCTTTTTCAAATTCAAAAAAAGGAAGAAAAAAGA
AGTTGAAGATCAAGAAGAAGGTAAGGAATCCTCGACGTTTTTCGTTAATA
TCCGTGTTAAGTGATTTATGACTCCCGTGATTTCAGTTCTAGTGAACCAT
GGCCTCCAAGAATATCTACTATTCAGAAAAATACTTTGACGATAAGTATG
AGTATCGACATGTAATGCTCCCCAAGGAGTTGGCCAAGCTTGTTCCCAAG
ACTCACTTGATGTCTGAGTCGGAATGGAGGAATTTGGGAGTACAGCAGAG
TCAAGGATGGGTTCATTATATGGCACACGAACCTGAGCCACACATTCTGC
TCTTTCGACGACCCATGACGTAA
back to top
Add to Basket