EMLSAT00000005432, EMLSAT00000005432-701279 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005432
Unique NameEMLSAT00000005432-701279
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s292supercontigLSalAtl2s292:489127..492069 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005432 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005432EMLSAG00000005432-688198Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023707EMLSAE00000023707-732635Lepeophtheirus salmonisexon
EMLSAE00000023708EMLSAE00000023708-732636Lepeophtheirus salmonisexon
EMLSAE00000023709EMLSAE00000023709-732637Lepeophtheirus salmonisexon
EMLSAE00000023710EMLSAE00000023710-732638Lepeophtheirus salmonisexon
EMLSAE00000023711EMLSAE00000023711-732639Lepeophtheirus salmonisexon
EMLSAE00000023712EMLSAE00000023712-732640Lepeophtheirus salmonisexon
EMLSAE00000023713EMLSAE00000023713-732641Lepeophtheirus salmonisexon
EMLSAE00000023714EMLSAE00000023714-732642Lepeophtheirus salmonisexon
EMLSAE00000023715EMLSAE00000023715-732643Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778100auto778100Lepeophtheirus salmonispolypeptide
EMLSAP00000005432EMLSAP00000005432Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005432

>EMLSAP00000005432 ID=EMLSAP00000005432|Name=EMLSAP00000005432|organism=Lepeophtheirus salmonis|type=polypeptide|length=799bp
MRLESESSSLRRRKNPKNNTNNNDEDEEIINSLNQGIPSSRLKGDNETNT
DLNSNGVHSKSKPENKEESSTKVKNESFNPPPSSDNPFTFSISVDIMALL
LFILSIWTRCIHLDQPRNVVFDEMHYGKYATMYLKRTFFFDSNPPLGKMM
IAGAALTSGYEGNFTFDKIGTPYPSDFPLMSFRMVPALCGSTLSPLVYLI
LCQMGLSHWSGFLAGFMVLFDTALLTQSRYILLESIMMMFSLISVLSALK
FRTNKALSLPWFFWFFSTVIGMSLSFCVKYLGIYCIFLCVWIMFRGFWSR
IADQSISNLRLVFEALFQLIVVNLIPMFIYLGLFYVHLSILTKAGSHDNL
MTSAFQASLDGGLSSIIRGQPSVVAHGSQITLRHTHGKTCWLHSHEHVYP
VKYSDNRGSSHQQQVSCYGYKDVNNWWIVKRPDRDDLAVHEPLDVVKDGD
VIQLVHGLTHRALNSHDVAAPMSPHNQEXSCYIDYNISMHTENLWKVNIA
NPPAAGEKLWYSIGSQVRLIHHTTGQALKYSGKLYPDWGFHQNEVVADKN
IIQLDTTWNVEEHRYTKNDDDQKSLERELITSELIPTNPTDMSFFEKFIE
LQIKMLITDQENVQNHNYASGPQEWPVLSRGIAYFISKSSSSLTXXXXXX
XXXXXXXXXXXLYMGYLLRRRRKCFDISEGMWLQFLYAVEILFVGYVLHF
IPFFFYDRTMFLHHYLTSYLFKIMLTSFLINHIYLLIGSFLPFKVFKVSY
ILLITLWCCGIVYVFLQMSVLSYGIYPMTAHEVKELKWKETWDLIIHKP
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mRNA from alignment at LSalAtl2s292:489127..492069-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005432-701279 ID=EMLSAT00000005432-701279|Name=EMLSAT00000005432|organism=Lepeophtheirus salmonis|type=mRNA|length=2943bp|location=Sequence derived from alignment at LSalAtl2s292:489127..492069- (Lepeophtheirus salmonis)
ATGCGGTTGGAATCTGAGTCTTCGAGTCTACGGCGACGAAAGAATCCCAA AAATAACACTAATAATAATGATGAGGATGAAGAGATAATAAATAGTTTAA ATCAAGGAATTCCCTCATCTCGTCTCAAAGGAGATAATGAAACAAATACA GATCTCAATAGCAATGGAGTTCATTCAAAATCTAAGCCTGAGGTTTGTGA CTTAAATCTTTTACTTCAGTTTACCTAATCTATTTCAAAATTGCGTACAG AATAAGGAGGAATCCTCGACCAAAGTCAAGAATGAATCCTTCAACCCTCC TCCCTCAAGTGACAATCCATTCACCTTTTCCATATCAGTGGATATCATGG CTCTTTTACTATTTATTCTTAGTATATGGACGCGATGTATCCACCTGGAT CAACCGCGTAATGTGGTGTAAGTTAGATATTATTTTGTTACTTCAAAGTA TTGCAAAATAACTTTTGTTTATGCCTTAGTTTCGATGAAATGCATTATGG GAAATATGCGACTATGTATTTGAAGCGAACGTTTTTTTTCGATTCCAATC CTCCTTTGGGGAAAATGATGATTGCAGGAGCGGCACTTACGTCGGGATAT GAAGGTTTTTAAACCATGTTTTTTATATTTGTTGAATTTTTATAACTAAC ATGATCCCAAAATTTTAAGGAAACTTTACTTTTGATAAAATCGGTACTCC TTATCCATCCGATTTTCCTCTGATGAGTTTTCGAATGGTCCCAGCTCTAT GTGGATCTACTTTAAGCCCTTTGGTTTATTTGATACTTTGTCAAATGGGC CTCTCTCATTGGTCGGGATTTTTAGCTGGGTTTATGGTCCTCTTTGGTAA CTAATTAATCATCAAAAGTTGTATGGAGGATAAAAAAAGAGTAATTCAAA AATGATTTTCCTTTACAGATACTGCCTTATTGACTCAGTCAAGATATATT CTTTTGGAGTCCATAATGATGATGTTTTCTCTCATCTCAGTTCTCTCAGC TTTGAAGTTCAGGACAAATAAAGCTCTAAGTCTTCCATGGTTCTTTTGGT TCTTTAGTACTGTCATTGGAATGTCTCTCTCCTTTTGTGTAAAATACTTG GGAATATACTGCATTTTTCTATGTGTGTGGATCATGTTTAGAGGTTTCTG GTCTCGCATTGCAGATCAGTCGATCTCTAACCTACGCTTAGTATTCGAGG CTCTTTTTCAGCTTATTGTTGTGAATTTGATTCCAATGTTTATTTACTTG GGACTCTTTTACGTACATTTATCCATTCTGACWAAAGCYGGGAGCCACGA TAATTTGATGACAAGTGCCTTTCAAGCCAGTTTGGATGGAGGATTAAGCT CTATTATCCGGGGACAACCAAGTGTTGTAGCTCATGGATCTCAAATAACA CTTCGACATACACATGGTAAAACATGCTGGCTCCATTCTCACGAACACGT TTATCCAGTAAAATACTCAGATAATCGAGGGTCATCACACCAGCAGCAGG TCTCTTGCTATGGCTATAAAGATGTAAATAATTGGTGGATTGTAAAAAGA CCTGACCGAGATGATTTAGCTGTACATGAGCCTCTAGATGTTGTCAAGGA TGGAGATGTTATTCAATTGGTACATGGTCTAACTCATAGAGCTCTTAATT CACATGACGTTGCGGCTCCRATGTCTCCACACAATCAGGAAGMATCTTGT TACATTGACTATAACATATCAATGCACACAGAAAATCTTTGGAAAGTGAA TATAGCGAATCCCCCCGCTGCTGGAGAAAAACTATGGTACTCCATTGGTT CACAAGTTAGGCTAATACATCATACCACCGGCCAGGCGTTGAAGTATTCA GGCAAGCTGTATCCAGACTGGGGATTTCATCAAAATGAGGTTGTTGCTGA TAAAAATATCATCCAATTGGACACTACCTGGAACGTGGAGGAGCATCGCT ACACAAAAAGTAAGCATTAATGTACAAGTATATAAATACATAGAATGTAT TTTTAATTACTAATCCCTTATAATTTATCATTATAGATGATGATGACCAA AAATCTTTGGAGAGAGAGCTCATTACATCCGAATTGATTCCAACAAATCC TACAGACATGAGTTTCTTTGAAAAATTTATTGAACTTCAAATTAAAATGC TTATTACGGATCAAGAAAATGTTCAGAATCATAATTATGCTTCCGGGCCG CAAGAATGGCCAGTTCTTAGTCGTGGCATTGCTTATTTCATATCCAAAAG TTCCAATGTAATATCATGTTCATACAGTTTATATGTCAATGAGATACATA TTTTTTTTTATTTTAGGCTCAAGTTCACTTACTNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTATATGGGGTATC TCTTGAGACGAAGGCGCAAGTGTTTTGATATATCTGAGGGTAATTATTTC ATTTTGTAATGTATTATGCATAAACATATATATATATATTTATTTGTTTA TTCCCTCTTCAGGAATGTGGTTGCAATTTTTGTATGCAGTGGAAATCCTT TTTGTAGGCTATGTCCTTCACTTCATTCCTTTTTTCTTTTATGATCGAAC CATGTTTTTACATCATTATTTGACATCTTACCTCTTTAAAATTATGCTTA CATCTTTTTTGATCAATCACATATATTTATTAATAGGGTGAGTACCGCAA TACTGTCAAATATCTATTTATATGTAACTTCTTCTCCTTCTTCTTGTCTC ATGTAGATCATTTTTACCATTCAAAGTATTCAAAGTGTCTTACATATTAC TCATAACCCTATGGTGTTGTGGAATTGTCTACGTCTTTCTTCAAATGTCA GTCCTGAGTTATGGAATTTATCCCATGACAGCTCACGAGGTCAAGGAATT AAAGTGGAAGGAAACGTGGGATCTAATAATTCATAAGCCTTGA
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