EMLSAT00000005435, EMLSAT00000005435-701282 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005435
Unique NameEMLSAT00000005435-701282
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s292supercontigLSalAtl2s292:576380..579418 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005435 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005435EMLSAG00000005435-688201Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000023730EMLSAE00000023730-732658Lepeophtheirus salmonisexon
EMLSAE00000023731EMLSAE00000023731-732659Lepeophtheirus salmonisexon
EMLSAE00000023732EMLSAE00000023732-732660Lepeophtheirus salmonisexon
EMLSAE00000023733EMLSAE00000023733-732661Lepeophtheirus salmonisexon
EMLSAE00000023734EMLSAE00000023734-732662Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778689auto778689Lepeophtheirus salmonispolypeptide
EMLSAP00000005435EMLSAP00000005435Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005435

>EMLSAP00000005435 ID=EMLSAP00000005435|Name=EMLSAP00000005435|organism=Lepeophtheirus salmonis|type=polypeptide|length=445bp
MSSLVIMDVHMMLFGGFGFLMTFLKSYSFSAIGLNMFLICIVTEWSIFLS
GFLHMEADYSIQITVTSLLEGGLAAGAVLISFGAVLGKLNPFQLLMMGIL
ESTVFVVNSYIGXTLLGAIDIGGXIFIHAFGAYFGLAVSRATRKRQLQKS
SHNLDSQYTSDIFAMIGTLILWVYWPSFNAVLAHEGHPRTRAVLNTYLSL
LGSTVGTFIISGFLGDMTFDMTDIQNATLAGGVAVGAIADLRIQPYGACI
IGTVTGAISTIGYRILQDKFNSKLGFHDTCGVNNLHGIPGVLSGVLSGFF
SGIANELTYGKEEYYTIFPSSAPSDELLLNMLRENIPGVQPGSGRQPSTQ
ALIQLLALAITLFVAIIMGYITGLILNIKSLFNPLEDDQLFDDFYFWRLP
NTLHGPIPKPSVINTPVPHLSEWFPVNDDGRERIHISNVVAPFKT
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mRNA from alignment at LSalAtl2s292:576380..579418+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005435-701282 ID=EMLSAT00000005435-701282|Name=EMLSAT00000005435|organism=Lepeophtheirus salmonis|type=mRNA|length=3039bp|location=Sequence derived from alignment at LSalAtl2s292:576380..579418+ (Lepeophtheirus salmonis)
ATGTCCTCCTTAGTGATAATGGATGTACATATGATGTTATTTGGAGGATT
TGGATTTCTCATGACATTTTTAAAGAGCTACAGCTTCTCAGCGATTGGAC
TCAACATGTTTCTTATTTGTATAGTCACAGAGTGGAGTATTTTCCTTTCT
GGATTCCTTCATATGGAAGCAGACTATAGCATTCAAATTACAGTCACAAG
GTATTTTTGATTGCATAAGAGATTAGCTGAATGATGTTATGTTTGCCTTT
TCCTTGAATTTAGTCTGTTAGAGGGAGGTTTGGCTGCAGGTGCCGTTCTA
ATTTCCTTTGGTGCCGTTCTTGGTAAGCTCAATCCTTTTCAGCTTTTGAT
GATGGGAATTCTTGAGTCGACTGTTTTTGTTGTTAACTCTTACATCGGAT
AMACTCTTTTAGGCGCTATTGACATTGGTAGATCTCTATTTTAAGCCCTG
TTCTCTCAGTAATTAAGCTCTTCATATTATGTCTTCTACTCTTTTATATA
GGAGGGKCAATTTTCATTCATGCCTTTGGAGCCTATTTCGGATTAGCTGT
CTCAAGAGCCACACGAAAACGTCAATTGCAGAAAAGCAGTCACAATTTAG
ACTCACAATACACCTCTGATATATTTGCCATGATAGGGACTCTGATCCTC
TGGGTTTACTGGCCTAGTTTTAACGCAGTTTTAGCACACGAAGGACATCC
ACGAACCCGTGCCGTTTTAAATACCTACCTTTCCCTGCTAGGCTCCACGG
TTGGAACCTTTATTATTTCCGGCTTTTTAGGGGACATGACCTTCGACATG
ACCGATATACAAAATGCCACATTGGCCGGTGGTGTTGCTGTGGGGGCAAT
TGCAGACCTTAGGATTCAACCCTATGGTGCATGCATAATCGGAACGGTGA
CTGGAGCTATCTCCACGATTGGATATCGTATTCTTCAAGATAAATTTAAT
TCCAAATTGGGATTCCATGATACGTGTGGAGTAAACAATTTACACGGCAT
ACCGGGGGTATTAAGTGGAGTCCTCTCTGGATTTTTCTCTGGAATTGCCA
ATGAGTTAACTTATGGAAAAGAGTAATCCCATATTATTTTATAGACGCAC
CTTTTGAATGGAATTTTATCATAATGTAGTTCATTTTTAGAGAATACTAC
ACCATCTTTCCTTCAAGTGCCCCAAGCGATGAGTTACTACTCAACATGTT
GAGAGAAAACATACCCGGCGTTCAACCAGGATCTGGACGACAACCAAGTA
CACAAGCACTGATACAACTCTTGGCCTTAGCAATTACTCTTTTTGTTGCC
ATCATCATGGGTTACATAACAGGTAAACATAAAAAATCAATACATATACT
AGGTACAGTCCATAACTTCGAAACTAGTAGTTAGAGTATAATTTGTATAT
ACATAAAATAGAGTTTGTATGTGTATGTGTGTGTCCTTTATGGATCCCCA
CACCGTTCCACCTTGGAGGCTGAAATTTTGCATGGGTGCCTGATTTAGAA
CCTGGTCAGATTAAGATGGGGGGGGGTATATAAAGGGGGGCCTTATGCTA
CATCGAAAACACAAAACCATTTTTGGAGCTCAAGGAGACTAGATAGGGGG
TTGATTTATAAATCAAAAAGTGACTGGTGTTTCAAAAACAACTATAGCAA
TAACGACGTTTTCTAAATGTATTCAAAATCAAGCATGCTATGGGCAAAGT
AAGGAATCGGCGAAAATTGCACTTCGGTTTTTTTTTCAGGTGCAAAAAAA
AACTATTTTTAATGAAATATTGGATTCGTTGATAAAATAAAGTTTGTACA
AATTTGTTTAGAAATTCGTTTGCATATAAATTTGACCCATAAAAATTAAT
GTTTAACTGAAATATTTGTCAATTATTGGAAGTTTACAAAACATTTTTTT
TTTAAATTCATAATAATACATATATGTATTTGATATATATTATAATGCTC
GGCTACAGCGAAAGGATCTAAACATTAAGAAGTAATAAACCATTGTCATT
GTGATTTTCCACTCACTCCTGTTCCCGAGCAACACTATGTTTCCACCCTT
GGCTAGTAATAATGACGTTTTAAAAAGAAGAAATAGAAAAGGTTTTGTAA
AAACAATGATGAAAAAGTTCCGTAAACATTGTTATGGCATGGGATAGAGT
GATGTCAAACAGTATTTAAGCATTTTGAGACTTGTTCCATTAAATTTGAT
AAGCTTTTTGAATGTTTCATGCTTGTATGATACCATTACAGATATTAGCA
CCAAACCATTGAGGCAGCAATAATTTGGAAGGAAATAACATTCTAAAAAT
TTCAGTTAAAGGAAAAAAGTAATGTCCCATACATTTTAGTACATCGATAA
CATACTTTATATTTTATTTTAAAATTTTCAAAGTTTTTCTTCATTTAAAT
GGCCTTGACTACATTTTGACAGATAGGTAGTTTATGTTTAAGCTTACCCT
TTTGTGTAGAAGTCCATTAAAAAAAAAGAATTTTTATCAATTTTTTTATA
TGAATATTATTTTTGACCACACGTTACAAAAAGTGGAATTTAAATAGGAA
AAAATCCATATACTTCTAAAACTAAATTCTTTACTATATAAAGTGAGTCT
CCTTTTCTTCCAACCTTGTTTGATTTTTTCATGCTCAAAAGAAAAAAAAA
TGTATATATACATAATTACTCAAATAAATTTGATTGAACACATAATGTTT
TGGAAGTGAATAGTTATTGGATATATCTGTTTAACCCCACCTACTTGAAA
TCCCCCTCAAAAAGACTCACATGCAATTTGAATTATTAACTTATTAATAT
AGATTTAAATCTCCATAGGATTAATTTTAAACATCAAGTCCTTGTTTAAT
CCTTTAGAAGATGATCAACTCTTTGATGATTTCTACTTTTGGCGTCTCCC
AAATACACTACATGGCCCAATTCCAAAGCCATCTGTCATAAATACTCCAG
TACCACACCTTTCCGAATGGTTTCCCGTAAATGATGATGGAAGAGAAAGG
ATCCATATTTCAAATGTTGTAGCTCCTTTTAAAACATAG
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