EMLSAT00000005443, EMLSAT00000005443-701290 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000005443
Unique Name	EMLSAT00000005443-701290
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s292	supercontig	LSalAtl2s292:644770..652666 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000005443 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000005443	EMLSAG00000005443-688209	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000023782	EMLSAE00000023782-732710	Lepeophtheirus salmonis	exon
EMLSAE00000023783	EMLSAE00000023783-732711	Lepeophtheirus salmonis	exon
EMLSAE00000023784	EMLSAE00000023784-732712	Lepeophtheirus salmonis	exon
EMLSAE00000023785	EMLSAE00000023785-732713	Lepeophtheirus salmonis	exon
EMLSAE00000023786	EMLSAE00000023786-732714	Lepeophtheirus salmonis	exon
EMLSAE00000023787	EMLSAE00000023787-732715	Lepeophtheirus salmonis	exon
EMLSAE00000023788	EMLSAE00000023788-732716	Lepeophtheirus salmonis	exon
EMLSAE00000023789	EMLSAE00000023789-732717	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto779090	auto779090	Lepeophtheirus salmonis	polypeptide
EMLSAP00000005443	EMLSAP00000005443	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s292:644770..652666-

protein sequence of EMLSAP00000005443

>EMLSAP00000005443 ID=EMLSAP00000005443|Name=EMLSAP00000005443|organism=Lepeophtheirus salmonis|type=polypeptide|length=1538bp
MRVARKLFGFGVLSITLHKNHNHDYNPSALLLNNGDGLKIPGRASNNANS
SFSQTSSNYLNWFSMIVKEMKKSFASTIKKALNLMTSENIETFLSRSESL
SLICYEVYWTETLENFMEKGFHGLLSLLNEDIEVILGMEMKDSSKRRDHD
RKNNFLNLLLSKKLGLSILIENQIRSKEDFTYQADFLRSYWNKNLETLTL
KQGLGALDFEYEFQVPKTHFLTESPQATYGIMMALGWQRRSFCISGYPGS
GKTSIIESMASRLGRYCVKIDNMIGFKNMEYRILELLAQTCVADCWLVIE
NIENIPQDMLSKISNPLYQIEAAKELRLQQFNLTPSKEINLGPNASVFFT
TRGSTNYNNSIPQSLRSRWRHISLIPPKDLSPWISWKLSVLGYSGIERLT
KLIILSIDQITNLSDSLMNHIGPYKLINDIFGSIEMSEGSESGSVMSAIL
HVTEXYILEEFKPGVKEFLRTRFGNEEIPPRSSLRNLILEERINSIWDQE
FEKVEGLPGCTPSEKQKRSLVKAFQILEDSTGVCVAFIGDTGTGKCLMAR
VLANLLDSEFLFLSSSLYTAEELLNNNGIITSAIRNSNRKFTIILNPSMS
NSIASVVANIIDKGIYINPSNYHSYKVETNSIKFVILLKPDEHLNSILIQ
RTRIIQLNERREVIVRMNLRLFFDSETSISDLYEKLSTIPITDPCLSFDS
DQRLQQDFENSTQEESQLSVSSRLNTLVLSYIWSYGATLTDSNSVDDFEK
RLRKIVKSYSDDIGLLQEESVFDQMYNGKEWARNENSLRRVVALLVHHGK
GVFISGKLEADIWVDQFIKDMPEFHIVQIMLKRVAFTDRCLTQHLLSNMQ
IKGNRIYYPKSNRKLLYLVKGLSNEVDVDWMIDMSLHKSLHQYDQERDKI
TLRDVCILATLERGISGASSISKSNIFCPKYYKNQNPKSLDMTLLLPKNP
DLSDNDKESINVVYKAYSSYNTNKGSLSSIKALGLTNMNIFSRLLKLDPQ
SWSKSLMKGLLEPLWSLEERRETLSFLHSHQINPDNEIKNENMGVISQLL
DEGEVHHILLIGQGGSGKRALLKNYKPLWYWSFKELMDSSLENKDETRVV
KAIESLVIPRDYPSLREQLDLMHQNVSAIVVICLNVEEFKTMNIIIGNTS
PWKLHKTLSIYKENVSKKKDSLEKAVNKSSFILTFIQKLNSKSLELKSEL
EIIKTQLNLHTKASLSNSQAIKNLESKLEEIRAEDVETRGFVDQIQKNIV
TAKLEYSELLSQKRRDYDESLNIMSSLTMEDVIRFCSSKPVHESLIEAFL
VFTNGHGPGQYEETNPSKTWETFRELFSTDLWAKNFKKIDPLMFGYREEF
YLRQRLDEFHKNSEAPENSMGQIILKLEDITKKEDMIQLERQDYLDKKLD
HKINMERLEKELETFEAYNTSAGNLLSLLSELGPHWKEEKERTMVILQNL
ESNEIFETIRDVYLRLLPRRILIQSIDQLFDGQIIHSEDCKKKGRKVDYF
GLRDQFWRNILYYPEGSISQNICILHDPDDNFFKVNPS

mRNA from alignment at LSalAtl2s292:644770..652666-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000005443-701290 ID=EMLSAT00000005443-701290|Name=EMLSAT00000005443|organism=Lepeophtheirus salmonis|type=mRNA|length=7897bp|location=Sequence derived from alignment at LSalAtl2s292:644770..652666- (Lepeophtheirus salmonis)
ATGAGGGTTGCAAGAAAACTCTTTGGCTTCGGAGTATTAAGTATAACTCT
TCATAAGAACCATAATCATGATTACAATCCCAGTGCTCTACTTTTGAATA
ATGGAGATGGGTTAAAGATCCCCGGAAGAGCCTCCAATAATGCTAATTCT
TCCTTTTCACAGACCTCTAGCAACTATCTTAATTGGTTCTCTATGATTGT
CAAGGAAATGAAGAAATCATTTGCATCCACTATTAAAAAAGCCCTTAACT
TGATGACATCAGAAAATATTGAAACCTTTCTTTCTAGATCAGAGAGCCTG
TCCCTCATCTGTTATGAAGTGTACTGGACGGAAACACTTGAAAATTTCAT
GGAAAAGGGATTTCATGGACTTTTAAGCCTATTGAATGAAGATATTGAAG
TCATCCTTGGAATGGAAATGAAAGATTCTTCAAAGAGAAGAGATCATGAC
CGGAAAAATAATTTCCTAAATTTACTCCTATCCAAAAAATTAGGCTTATC
TATTCTAATTGAGAATCAAATCCGAAGCAAGGAAGATTTCACATACCAAG
CAGGTACATCGAAGACCATTAAAGCACACTGTTTAATGACTATTTTTTTA
CTCAGATTTTTTACGGAGCTATTGGAACAAAAACTTGGAGACCTTGACTC
TTAAGCAGGGACTGGGAGCGCTGGACTTTGAGTATGAGTTTCAAGTCCCA
AAAACACATTTTTTAACTGAGTCACCCCAAGCAACTTACGGCATAATGAT
GGCTCTGGGCTGGCAAAGACGTTCATTCTGTATTTCAGGGTATCCTGGCT
CTGGAAAGACCTCTATAATTGAATCTATGGCCTCTAGACTGGGCCGCTAT
TGTGTGAAAATCGATAATATGATTGGGTTCAAAAACATGGAATACAGGAT
TTTGGAACTTCTAGCTCAAACTTGTGTGGCAGATTGTTGGTTAGTGATTG
AAAACATAGAGAATATACCACAAGACATGCTCTCTAAAATCTCAAACCCA
CTTTATCAAATTGAGGCTGCAAAGGAACTTCGCCTGCAACAGTTTAACCT
CACTCCGAGTAAGGAAATCAATCTGGGTCCTAACGCTTCAGTCTTTTTTA
CTACGAGGGGGTCGACTAACTATAATAACAGTATACCTCAATCTCTTAGG
AGTAGATGGAGACACATCTCCCTCATACCACCAAAGGATTTGTCCCCGTG
GATTTCATGGAAGCTCAGTGTTCTTGGGTATTCGGGTATTGAGAGATTAA
CAAAGCTTATAATACTTTCGATTGATCAAATCACAAATTTGTCAGATTCA
CTCATGAATCACATAGGTCCTTATAAGCTGATAAATGATATTTTTGGGTC
CATTGAGGTAAAACACAGGCACTTGAGCAAAATGAATTAATTTCAACCTT
GAGTTTTATCTTCTTAATAATTATAGATGAGTGAAGGGAGTGAGAGTGGA
AGTGTCATGTCGGCCATTCTGCATGTCACGGAGMATTATATTTTAGAGGA
ATTTAAGCCTGGAGTAAAGGAATTCCTTCGAACGCGTTTTGGAAATGAGG
AAATTCCTCCAAGATCTTCTCTTAGAAACTTGATATTAGAGGAAAGAATT
AACTCTATCTGGGACCAGGAGTTTGAAAAGGTGGAGGGTTTGCCTGGATG
TACTCCAAGTGAAAAACAAAAACGGTCACTCGTGAAAGCCTTTCAGATTT
TGGAGGATTCAACAGGTGTCTGCGTTGCTTTTATTGGGGATACAGGAACA
GGGAAATGTCTGATGGCCCGTGTTTTGGCTAATCTACTGGACAGTGAATT
TTTATTTCTTTCGTCTTCTTTATATACTGCAGAAGAACTTCTAAATAATA
ACGGAATTATCACGAGTGCAATTCGAAACTCCAATAGAAAATTCACAATC
ATTTTAAACCCATCCATGAGCAATTCCATCGCTTCAGTGGTGGCCAATAT
AATTGATAAGGGCATATATATAAACCCTTCCAATTATCACTCCTATAAAG
TGGAAACAAATAGCATCAAGTTTGTCATTTTACTCAAGCCAGATGAACAT
TTAAATTCCATCTTGATTCAAAGAACGAGAATCATACAATTGAATGAAAG
ACGCGAGGTTATTGTGAGGATGAATTTAAGGTTATTTTTTGATTCTGAGA
CTTCCATCAGTGATCTCTATGAAAAGCTATCTACTATTCCAATAACTGAT
CCCTGCCTCAGCTTTGATTCTGATCAACGACTTCAACAGTGTGTGTCACT
ATATAAATTATTTTTACTGTAAGAAATTCATTAATCACTCAAAGAATTGT
TATTTATTTCTCTTATTTCAGGGATTTTGAGAATAGTACACAAGAAGAAA
GTCAATTGAGTGTTTCTTCTCGATTAAATACGCTGGTTTTGAGTTATATT
TGGTCTTATGGAGCAACATTAACTGATTCCAACTCCGTTGATGACTTTGA
GAAGAGATTGAGAAAAATAGTGAAGTCATACTCCGATGATATAGGTCTAC
TTCAAGAAGAGAGTGTATTTGATCAAATGTATAATGGCAAGGAGTGGGCG
AGGAATGAAAATTCCCTTAGAAGAGTGGTAGCGCTCTTAGTACACCATGG
AAAAGGAGTTTTTATTTCTGGGAAACTTGAGGCCGACATCTGGGTTGATC
AGTTTATTAAAGACATGCCAGAGTTTCACATTGTTCAAATCATGCTTAAA
AGGGTGGCATTTACTGATAGATGTTTAACTCAACATCTTTTGTCCAATAT
GCAAATCAAAGGCAATAGAATATATTATCCAAAGAGTAATCGGAAACTTT
TATACTTGGTAAAAGGACTCTCTAATGAGGTGGACGTTGATTGGATGATA
GATATGTCCCTTCATAAATCCCTTCATCAGTATGACCAAGAGAGAGATAA
AATTACTCTAAGAGACGTGTGTATATTAGCCACACTGGAGAGGGGAATCT
CAGGAGCTAGTAGTATATCCAAAAGCAACATCTTTTGTCCAAAGTACTAC
AAGAATCAAAATCCAAAGTCTTTGGATATGACTCTTCTCTTACCCAAGAA
TCCAGATCTCAGTGACAATGATAAAGAGAGTATCAATGTCGTTTATAAAG
CATATTCTTCCTACAATACGAACAAAGGCTCACTTTCTTCCATTAAAGCT
CTAGGCCTCACAAATATGAACATATTCAGTCGCCTTCTAAAGCTTGATCC
TCAGTCATGGTCAAAAAGTTTGATGAAAGGACTGTTGGAGCCTCTTTGGT
CTCTAGAGGAAAGACGGGAAACCCTTTCATTTCTCCATTCTCATCAAATA
AATCCTGATAATGAGATTAAGAATGAAAACATGGGTGTTATTTCGCAACT
CCTCGACGAGGGAGAAGTTCATCATATTCTTCTCATAGGACAAGGAGGAA
GTGGGAAGAGAGCTTTACTCAAAAATTATAAACCTCTTTGGTATTGGAGT
TTCAAAGAATTGATGGATAGCTCCTTAGAGAATAAGGATGAGACCAGAGT
TGTCAAAGCCATTGAATCTCTGGTTATCCCTAGGGATTACCCATCCTTAA
GAGAACAATTAGATTTGATGCATCAGAATGTCTCTGCAATTGTTGTTATT
TGCTTGAATGTTGAAGAGTTTAAGGTTCAAGATTTAAAACGGGTTCTCAG
TGCTTTTATGGAAAAATTTCGAATAATAGGAGTCCCTCAAGCATCTATAT
ATGAATTAAAGTAACTACTGTTTAATTAATTACTCATAAATAAGTACTAG
TGATACGCGGATTGGCTTTTTTGAGCCCAAGGTTCCTGCATCTTTTTAAT
TATGTAACCCAGACGCACAAGGTTTTATCTAATTTGATTTATATGAAATT
TGAAAAAAAAAAACTTGATTATTTCTTCCTTAACATATATATTCAATACA
TATTACGGGTAATTCAATTATTTAATTGAAATTTGAAAGTTTATTTTACA
AAAAAAAGTCAGGAACCTTCTCAGTCATAATGAAATTTACTTTTTTTTTT
TTTTTTTAATGTTGATGTAATGTTAAAGATAACCTTCCACCTACAATTTA
CTTGCCAACTTATCATAAAAATAGATGCACCCGCCAGCGTCAGCCATTTG
TTCAATGTTAGTTTAAAAAAAGAGGTTCTTACATTAAATTCCGATTTTCC
TTTCTATATTTAATAAGAATGTGTTTGAAATTCAATGTTTGGCATAAAAG
CGTGATAAAAGGTGCGCTGGTGTGTGATTCTAGAGTAACGTGTGAGACTT
GAGAGCCTTGGAATGGGTATACATGTTCAGTAGCCAAAAACCTAAACTAC
TGAACGAACTTACATTTGCTGAAATTACGTAGCTCGATTCAACCTGACCC
TCTAGACCCACATACTAAACGTCAACCCGCCTATAACTAGTAGGTGCAGA
ATATGTATACTTAATTCTGATTTAATTTCAAGGCAAGTCACTCAAGGTTT
TGATATTGACTCTTCCATTCTCCAAAACTTCTTGGACATCCACGATAAAA
TTCGTACCTATTTTGAGACAATGAACATAATTATCGGTAATACATCTCCA
TGGAAGCTTCATAAGACTCTTAGTATCTACAAGGAAAATGTATCTAAAAA
AAAAGACTCCCTGGAGAAAGCAGTCAACAAATCATCCTTCATTCTCACTT
TTATTCAAAAACTCAACTCCAAATCCCTTGAACTCAAATCAGAACTCGAG
ATTATTAAGACCCAATTGAATCTCCATACAAAGGCATCCCTATCTAATTC
ACAAGCCATAAAAAACTTAGAGTCCAAATTAGAGGAAATACGTGCTGAGG
ATGTTGAAACGAGAGGCTTTGTGGATCAAATTCAAAAAAACATTGTAACA
GCAAAATTAGAATACTCTGAGCTTTTGAGTCAAAAGAGACGTGACTATGA
TGAATCTCTAAATATAATGAGCTCACTAACCATGGAAGATGTGATTCGAT
TCTGTTCCTCCAAACCTGTTCATGAGTCTTTAATAGAAGCCTTTTTAGTC
TTCACTAATGGACATGGACCTGGACAATACGAGGAAACGAATCCTAGTAA
AACATGGGAAACATTTAGAGAGCTTTTTTCCACGGATTTGTGGGCGAAAA
ACTTCAAAAAAATTGATCCATTGATGTTTGGATACAGAGAGGAGTTCTAT
TTACGACAACGTCTCGATGAATTTCATAAAAATTCCGAGGCACCGGAAAA
TTCAATGGGTCAAATCATTTTAAGTAAAAACATTATAAATAAATTAATAA
ATGCATACTAATGCTCGATGGACATATCGGCCGATTATAGAGCGTTTTTG
CTGACGTCACAAATAAACCGACAACACCATCGTGGTGACGCTGCCTAGTT
ATTTTGACGTCTCGTGAAAAAGCTCTATATAAGAGAAGAATTGCTAATTT
GCAAAGTTTACCAATAATAATTATTAGTCATAACCGATACAAAAATTTTC
TTATCAAGAAAAAAAACAATATCAAAAATTTACAAGTTAATTCARCCCTG
CTAKCCCAGACATGACTAGCACCCACCATTTTGAAAGTTATCCTGCTTAT
TATCAATCACTTTGATTCTGAGAAACGCATTTAAACCCTACTAGAGTCCG
GATTGTCCCGGGACATTAAGAAATTAAAATTAATTAAGAATTCTTCTGCT
TAATATGAAACAAAAAATAAAGATAGTACAATTTTAAGAATTATTCTCGC
TTCATTTTGGTGTTAGGATTTATCATTGCACCCTTTGTTTATAAGGACAT
AGAGTAGGTTTTCTGGACATTAAGAAATTAAAACTAATTCTGAACTCTTC
TACTTTTGTGAAAAGGAGATTGATTATAAGGTTTAAAGAAGAAACAATAT
TCAAGATGCTCATCTTTCTTATTATTGTAAAAATATTCCTTTGTCTTATT
CTCTTTTTTTTCTTCTCTAAATCTTATTATCTCCATTTAAAAAAAGTCTG
CAACGATAATCCAACAGGCAGTGAAAATAATTCTTAAAATTTTACTGTCT
TTATTCTTGTATTTTATGAAATAAGCACTAATAAACTATTTGTTAGTCAA
AGAATTGGTTTTTAATAATGACTTTTTTCTTTTAAGAACTCTGTAATGGA
GCCTATGAGTCAGCTGCATCATTTGAGGATCGCCTTGATCTTGAGATTAA
GATTATGGCATACGAAAACTTTGTCTCTGACAAAATATCAGAGCTTGAAG
ACATAACTAAAAAGGAGGATATGATACAATTGGAAAGGCAAGATTATTTG
GACAAAAAATTGGATCACAAAATCAATATGGAACGCTTAGAGAAGGAGTT
GGAAACATTTGAGGCCTACAATACGTCTGCTGGGAATCTTTTATCCCTTT
TATCCGAGCTTGGGCCTCATTGGAAAGAAGAAAAAGAAAGGACTATGGTT
ATTCTACAAAACCTAGAATCAAATGAAATTTTTGAGACTATCAGAGATGT
ATATCTACGACTCCTTCCAAGACGTATTTTAATTCAGAGCATTGATCAAT
TATTTGATGGCCAAATTATTCATTCAGAGGACTGTAAGAAGAAAGGTAGA
AAAGTGGACTATTTTGGTCTGAGAGATCAATTTTGGAGAAATATTCTCTA
CTATCCCGAAGGCTCTATTTCTCAGAATATTTGCATCCTTCATGATCCAG
ATGATGTATATTCCTATGTTTTGAGAAAAAGAAAATATAAAATACTGCAT
ATCCTTTGTGAAAGTGACGTCCAAAAGGTTTGAACTCCTCCTTGATATAA
ATAAACAAGTCAAGGAATACTCTAAATACTTAAAGTAGACATTTTTGTAA
GGAAAAAAAGTTCAAGGTGAGAGGGATACATTTGCTACACCTGAATTAAG
ACCCTTGTTAATATCAGCTTATACGATTTTTGGGGGAGAAAAGGAATCAC
TATTCTAAAGAGGAGTAATTCTACCTATGAAATAGTATTAGTGCAGGCAA
AATATTGTAATTATATTTACATACATTATTGCTCGGGTGTTAATGAACAG
CCCGTAGTTGTTCTACCCCCATGTACAGTCTTTCTTTTTTCTCCTTTTTA
GATCAACTACGGGCAATGTTTTCTTTTTTTCTATTTATTGAATATTTATT
AAATGAAAAAGATAATTAAATCAAAACAATCTCGTAATGAGTATTAGTAA
TTGAATATTTTTGGGTTGATCTATTTGTTTTATATGCTCGGAGCAATAAT
TCATGAATAAAGTTCTTTTAATTCCTCCAGACATTAATTAAACGATTGTT
TTAATTCTATTCCCTATTTCATTTAATAAATATTTTACAAATGGAAAAAA
AGAGAAAGAGGATGTATCCATGTATAGAGTATTTCTTGCAATAAACAACA
AAGTTTTAACTTTTTTTGGTCATTGGGTTAAGATTGTAGACCCCAGATTG
CTTATATCTCGAGAAATATGAAAATTATTTAAGCAATGTTAAATGGTGGC
TTTTGTTGTCAAAATATTGCTTTTTTGAAGGTTATTTAAAAAATATAATT
TTACAAGATTTTATCCCTATGATAAAAACACAAAGCTTGCTGTACCCGTA
GTGAAAACTTATACAACTTCATTTATTTTTTGGAAGAGTATCTAGAAAAA
ATAATATTTGAAATGATGTTTAAGATTTTTTACTCGAAAAATATTTTTCT
ATTTAGGTATATTGTACAATCTAGCTTTGCTGATTATCATGCCTGGTTTT
AGAGTAATTGAGGGTTGGGCCAAAGTTAAATATGTGGCCCTTTTCTTTCT
TTCTACTTTTATAATTTGATTTAAAAAAAACAAAAAACTTCAAACACAAC
ATTTCAAATTACTTTTTCATTGTTTTTTTTTTTTATTAAAATAATTTTTC
ATTTCATTTTTAAAAGAACTTTTTTAAGGTAGGTCAATCCTTCTTAA

Add to Basket

Search form