|
Associated RNAi Experiments
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
LSalAtl2s297 | supercontig | LSalAtl2s297:281209..289703 - |
Analyses
This mRNA is derived from or has results from the following analyses
Analysis Name | Date Performed |
ensembl | 2013-09-26 .965016 |
Properties
Property Name | Value |
Logic name | ensemblgenomes |
Biotype | protein_coding |
Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000005517 >EMLSAP00000005517 ID=EMLSAP00000005517|Name=EMLSAP00000005517|organism=Lepeophtheirus salmonis|type=polypeptide|length=2021bp
MKMKEEITEELKVFSNEESEVMDLFVGNLSLYTTEFKLQTYFSTFGTLTS VKICTHPENGKNKRFGFLNFESADVISKILNYPRHEIDGKILEIRYASKN MLNKRKNSVVKAKSPENEEVNPRIETSNKAKIFVGGVSQNAKVDDLRSYF SSFGPVQNVTLLPDHITGRHRGFGFVTFENESTAEVVCSSRYHTIKMKKV ECKKASVSRATKSYSDTKKPLLEPPIAPPPTRLFPMIDPNNKSPGLLGEH PWXALTNTGTGGLLLNPXALYPSPFPFTPVYIDPCMSLGSPHHPPTLQLP SSSVSSYKVLNHRVLSDSSLRYSPYTLQGRIHSSQESSPYSPSAFMSPAG HHGTGGYXQPLLLSSLSTNTDDSTLGMWKLLFWTILDLGILFLTPCIVSA YDDGTSLLPHVSMDHYHNYTQLETIFKNLTNSYPTLARMYSIGKSVEGRE LWVLRVTVGAHEEDRKLRKPMFKYVANMHGNEALGRELVIYLSDYLLSNY GKITRVTSLLESTEIWLMPSLNPDGFEASSEGNCYLDEADGGAGRANANG KDLNRNFPDQFIDEADSQSLFKNREPETLAAMTWIVSNPFVLSGNLHGGS VVTSYPFDNSPXLSIFSKYSPAPDDTLFIQLAHIYADNHVVMKRGNGCPG ESFPGGITNGALWYDVPGGMEDFNYVRSNCFEITMELSCCKYPQSRTLKA EWEMNKESLLAYMEATHVGAHGIVSDQDTKKGIQDAIIEVKSINHNLTST SRGEYWRLLPYGKFELRVHAYGYKSSRFMPIEISKKNPTVGIDFYLTKEV VKIPLREDGFMRAPEFKYHHYKNLTEFLRFYSNEYKSISRMYSIGKSNQG RELWVMEISDNPGKHEFLEPEFKYIANMHGDETVGREMLLLLIQYLLENY ESNPRVKKLVDSTRLHFMPSMNPDGFELRTRENGNMVDLNRNFPDQFVGD PSGFEIETSAVIKWSKSHNFILSANLHGGSLVANYPFDNNKEGHKGPSLS PDDNIFEYLSLIYSNAHKKMHQGGYCSLERFLHGIVNGANWYVLSGGMQD WNYINTNDFEITLELSCDKYPHPEQLSIYWDDNKEALLKYIEQVHNSVKG YAIDKETGDIIKNITIEVEGISHPIISGESGDFFRLLKPSQEYKVIISSE GYETKTLRGVKTGDVLNVTLSKDDSDYWSKRYDFNLSKNIDKSQNYQSDI EMRSTLAELENMYPQIAEAFINEADWSLRLPALLLRNDTVSSPKTNILIL GGIYGSQPVGREIALRFALHLAHGFAKEKDPHIVELFNRINIWIIPGGDP EGFLHSKEGQCSYGESDSFIKETGSRFGSSSSSAISSFDTFFKNHDIKVG LSLEGEGEFIRIPWDEDEAKTSPRINLASFEHLGSAFLKRFKTSNCSKVK GGIVQGSQLSVYSHXILDYSYHNFGVIFLSAHISCCNYPYARDLTLIWKN ILGSLMDFVDXAGQGIYGTITDMKGTPLESPIVTFRGSRIKVNKGSFMLV LPEGNNYKVNIKHESYDPKSSEFSIISHHLNKKNIVMDLVVSTDLKYYSK DSDQLVFLQNLTSKFPDFAXHYPIGLDSHGNHMRVLEISNDLNKCQEKPG LKFLGGLRSDPVSTEMLLFLADFILTHRNLDDEVGRVFQNYCLHFVFISS NNMWGSNENCNVSXPFLDEEFASSSSSPEARNLMAWMRKKKFVFSLHIMG NTEDIYLPNSAVNFDYAERLTASLSSRYINSLQSTSPTCTQNPSIKYSQS SYSMSNMNWNEFEIIELGLGISCCPYPEVTELTHIWSRHRRSLLSLISSG LQGIHISIPQEGSSVQIQEISSNDFLVDNGNLWIALPEGXYTLSIDIPGH ITTNKIVRVYTGEFTHILSPLPPTSGLPKMIVLLIILATFAALLFLGPFY CHCRRERRKRRRRNYDGFTPLHGSSWKGDSRYTDEDEFEDDVEEDDIESH QATSDFNLKTTSYQDDFDEDDETGXLTSLWNQSQIFVFQKPCCKLDRRVY LSKDEMIKSFEIVSLSILFFF back to topmRNA from alignment at LSalAtl2s297:281209..289703- Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000005517-701364 ID=EMLSAT00000005517-701364|Name=EMLSAT00000005517|organism=Lepeophtheirus salmonis|type=mRNA|length=8495bp|location=Sequence derived from alignment at LSalAtl2s297:281209..289703- (Lepeophtheirus salmonis) ATGAAAATGAAGGAAGAAATAACGGAGGAACTCAAAGTTTTTTCAAACGA
AGAATCTGAAGTAATGGACTTGTTTGTGGGTAATTTAAGTTTATATACGA
CAGAGTTCAAGCTTCAAACCTATTTCTCCACATTTGGCACTCTTACTTCT
GTCAAAATTTGCACTCATCCCGAAAACGGAAAGAATAAAAGGTGAGGAAT
TGATGCCAAAGTTGATGCTAATACATCAATCCCTTTGCTCACCTAGATTT
GGATTCCTCAACTTTGAAAGTGCAGATGTTATTTCAAAAATCCTGAATTA
TCCCCGTCATGAAATAGATGGAAAAATCCTAGAGATTCGTTATGCCTCCA
AGAATATGCTGAATAAACGAAAAAACAGTGTAGTGAAGGCAAAGAGTCCA
GAGAATGAGGAAGTGAATCCTCGCATCGAAACATCGAATAAAGCCAAGAT
ATTTGTGGGAGGAGTAAGTCAAAACGCCAAAGTGGATGATTTAAGATCCT
ATTTCTCTTCCTTTGGACCAGTTCAAAATGTTACACTCCTCCCAGATCAC
ATTACGGGTCGTCACAGGGGTTTTGGATTCGTTACCTTTGAGAATGAATC
TACTGCTGAAGTTGTTTGTTCGTCAAGGTAGGTTTTCTATCCTCCAACAA
ATCCAATGAGGATTCATTTTATTTTTCGCAGGTATCATACGATCAAGATG
AAGAAAGTTGAATGTAAGAAAGCATCTGTGAGCAGAGCAACCAAGTCGTA
TTCTGATACCAAGAAACCCCTTTTGGAGCCTCCGATTGCTCCCCCTCCCA
CACGACTATTTCCCATGATAGATCCAAATAATAAAAGCCCAGGACTTCTA
GGTGAACATCCTTGGMAAGCCTTAACTAACACTGGGACAGGTGGCCTTCT
TTTGAATCCCTMCGCACTCTATCCTTCTCCATTCCCCTTCACTCCTGTCT
ATATAGATCCCTGTATGTCTTTGGGCTCGCCACACCATCCTCCAACCCTT
CAACTCCCAAGTTCTTCTGTAAGCTCCTACAAAGTCCTTAATCATCGTGT
GCTCTCTGATTCCTCTCTTCGCTACTCACCCTACACGCTTCAAGGCAGGA
TTCATTCAAGTCAAGAGAGCTCACCATATTCTCCCTCTGCATTTATGTCA
CCAGCAGGACATCATGGAACTGGAGGCTACCAMCAGCCACTCCTACTTTC
AAGTCTTTCTACTAACACGGACGACTCAGTAATTAAACAGTCTGAGTATC
ATCATTGGGGCCCTTTTGTTCCCTCTCGAAAGATATAAAAATATGGGTAT
GTATTCTATTCTTTTCGTTAAGAGAATGCAACAAAATTTGGGTGAAGGGA
GCTTAACAATAATTAAGCGACCGAGTTTAGCAATGCTGCTTAAAGTTTCT
TTCATAGTCTGTTTTTTTTTTGTGTCCGCAATTAATTTTTTTGTATGTGT
GTAGTTATAAGGAATTGTTAATACTTTCAATCTCCCTCTACTTCTAATCT
ATTATATAGTTCCTATTTGATGAAAATTATAATAAATATCTTGTAATTTG
GTATCTGCATTTCTTTTTAAAGCGATTTTTGCAAGGATTGTATGTAATCA
GGAAGGTCATATTTTAAGTTAGTACATAGTGCATCCTGAAACATAATACA
TATTTGATGTAAATGAGAGGTACCTAGTCTAGTAATATATAGGAGGAAAC
GCCTTTAAAGACACGTAGAAGAGTTCATTCTCGAGAATTCAATAAAAAGT
TTGAAGTGGATAACAGTTATAGTCACATACATGATTATATTAAAATGTGT
AGTCATAGCGAATTTGATATGATATAGAATATGATAGTCATAGAGAGAGT
AAAAAGAGACGGTAGTTGTCATGGAGKAATACACACTACAGAGKATGTGA
AAATAAGTAATGATGAAGTAATGGTGGTGTAATGAGCGGGTGTAGATTGA
CTTTAATAGTAAAATGAACAGAGTTTGTACATTGATATTAGTAACATATG
TATGAGTATGTGCATGACATGGGAGAGAGCTCAAGCATCTGCATAGCATA
ATAGGAAAAAGGAGTTGAGTTGTAATAATAGTTTAGTAACTAGTCGGAAT
AGTAGTAGTTAAATAATAGTGGTGGAAGTATCACAACCCAGATTTGACAT
TTACATTATTGTATTTATTGTAAATTCAGAGAGAGCTAGAGAGAGAGAGA
GAATAATAGAAAGTAATTCACTGCGGATGCGAGTTGATTCTGCAGATGGA
GGGATGCTGGTAACTACATAAATAATAAACGCACGGTACGTAGTGCGTAC
TACACGTACACTAACCAAGTAGATAAACTGACGTGATACTCACATCAATA
GATAGCTGGAGCAAGAGCGAGTTCTGACTAAACTATTATTAGGAAACCAA
AAATTCGAATGAACTCCAAGCAGGGATGTGAGAAATAAGTAGAACCACTC
TCTATTCTGAAGAAAAGGAATGAGAGCTGACGTGGGGTTCATTCTGGCTA
TGGACAAAATAAGACTTTAGGAATGTGGAAATTACTTTTTTGGACGATCC
TTGACCTAGGGATCCTCTTTTTGACTCCTTGCATCGTCTCTGCGTACGAT
GATGGTACGTCACTCCTACCCCATGTCTCCATGGATCATTACCATAACTA
CACTCAGTTAGAGACAATTTTTAAAAATCTTACAAATTCCTATCCGACTC
TTGCTCGAATGTATTCCATTGGGAAAAGTGTTGAGGGGAGAGAGCTATGG
GTTTTAAGGGTTACAGTTGGCGCACATGAGGAGGATAGGAAGCTGAGRAA
GCCTATGTTTAAATACGTGGCCAATATGCATGGAAACGAGGCTTTGGGTC
GAGAGCTCGTTATTTACTTATCAGATTATCTACTTTCCAATTATGGGAAA
ATTACGAGAGTTACTTCTTTATTAGAGTCTACGGAGATATGGCTTATGCC
TAGTTTGAATCCAGATGGGTTTGAGGCATCATCCGAAGGGAATTGCTATT
TGGTAAGATCATTTTTTTATCTTTTTAAGTATGTAGATTTAAAAAAAATG
TATATATATGTTATTTACATTAGGACGAGGCTGATGGAGGAGCGGGTAGA
GCAAATGCAAATGGAAAGGACTTGAATCGAAATTTTCCTGATCAATTTAT
TGACGAAGCAGACTCTCAATCTCTATTTAAAAATAGAGAGCCTGAAACTC
TTGCTGCAATGACTTGGATTGTTTCAAATCCATTCGTTTTATCTGGAAAT
CTTCATGGTGGCTCTGTAGTGACTAGCTATCCATTCGATAATAGTCCCTW
TYTATCCATATTCTCGAAATATTCACCTGGTAATTAATTAACTATCTACT
TCGTTTTATTCAATAGAAGAACTACAAAGTCTTTAATTCTATTTAACAGC
TCCGGACGATACTTTATTCATTCAATTGGCCCATATTTATGCTGATAATC
ATGTCGTTATGAAGAGAGGAAATGGTTGCCCAGGAGAGTCTTTTCCTGGT
GGAATTACGAATGGAGCTCTATGGTATGACGTTCCCGGCGGAATGGAGGA
TTTCAATTATGTTAGAAGTAATTGTTTTGAAATCACTATGGAACTATCCT
GCTGCAAGTACCCTCAATCTAGAACCCTCAAAGCGGAGTGGGAAATGAAC
AAAGAGTCTTTATTAGCGTATATGGAAGCAACACATGTCGGAGCTCATGG
CATCGTTTCTGACCAGGACACGAAAAAAGGGATTCAAGATGCAATCATTG
AGGTCAAAAGTATTAATCATAATCTTACATCCACTTCCAGAGGAGAGTAT
TGGAGACTCCTGCCTTATGGAAAGTTTGAATTGAGAGTTCATGCATATGG
ATATAAAAGCTCTAGATTTATGCCCATCGAGATTTCAAAGAAGAACCCAA
CTGTTGGAATTGATTTTTATTTAACTAAAGAAGTTGTAAAGATTCCACTG
AGGGAAGATGGATTTATGAGAGCTCCAGAATTTAAATATCATCACTATAA
AAATCTCACCGAATTTCTACGATTTTATTCCAATGAATACAAAAGTATAA
GCCGAATGTACTCGATTGGAAAGTCGAATCAAGGACGAGAGTTGTGGGTT
ATGGAAATCTCTGATAATCCAGGAAAACATGAATTTCTTGAGCCTGAATT
CAAGTACATCGCAAATATGCATGGAGATGAAACAGTGGGTCGGGAGATGC
TTCTCCTTTTGATTCAATATCTTCTTGAAAACTATGAGTCAAATCCCAGA
GTTAAAAAACTTGTGGACTCCACTCGTTTGCATTTTATGCCTTCAATGAA
CCCTGATGGTTTTGAGCTTCGGACTCGAGAAAATGGAAATATGGTGGATT
TGAATCGGAATTTTCCGGATCAGTTTGTTGGAGATCCATCAGGATTTGAA
ATTGAAACATCAGCTGTTATTAAGTGGTCAAAAAGTCACAATTTTATACT
TTCTGCAAATCTCCACGGAGGATCCTTGGTTGCAAACTATCCTTTTGACA
ATAATAAAGAAGGCCACAAGGGCCCATCACTTTCTCCAGATGACAATATA
TTTGAATATCTATCCCTTATTTATTCCAATGCTCACAAAAAGATGCACCA
AGGAGGATATTGCTCTTTGGAAAGATTTCTTCATGGTATTGTAAATGGAG
CTAATTGGTATGTACTCTCGGGTGGTATGCAAGACTGGAATTATATTAAC
ACAAATGATTTTGAAATTACTCTTGAATTAAGTTGTGATAAATATCCTCA
TCCTGAGCAATTGAGTATATATTGGGATGATAATAAGGAGGCTTTATTAA
AATATATAGAACAAGTTCATAATTCCGTCAAAGGATATGCTATTGACAAA
GAAACTGGTGATATTATCAAAAATATTACAATTGAAGTTGAAGGAATATC
CCATCCAATTATATCCGGAGAGAGTGGTGATTTTTTTCGCCTTCTGAAAC
CCTCACAGGAATACAAAGTCATTATTTCTTCTGAAGGATACGAAACCAAG
ACTCTAAGAGGTGTAAAAACAGGAGATGTACTCAATGTGACTTTGAGTAA
AGATGATTCTGATTATTGGTCAAAAAGATATGATTTTAATTTATCTAAGA
ACATTGACAAATCTCAAAACTATCAAAGTGATATAGAAATGAGGTCAACT
CTTGCTGAACTAGAAAATATGTATCCTCAAATCGCAGAGGCATTCATCAA
CGAAGCGGATTGGAGTTTACGACTCCCTGCTCTTTTGCTAAGAAATGATA
CCGTGTCTAGTCCCAAAACTAATATACTTATACTAGGTGGAATTTATGGA
AGTCAACCTGTAGGTAGAGAGATAGCTCTTCGATTTGCCCTCCACTTGGC
TCATGGATTTGCGAAAGAAAAAGATCCACATATTGTGGAATTGTTTAATC
GAATTAATATTTGGATTATACCTGGAGGCGATCCTGAAGGGTTTTTGCAT
TCAAAGGAAGGTCAGTGTTCATATGGAGAAAGTGATTCCTTTATCAAAGA
AACTGGATCCAGATTTGGTTCTTCCTCTTCATCTGCTATATCCTCCTTTG
ACACCTTTTTCAAGAATCATGATATTAAAGTAGGACTAAGTTTAGAAGGA
GAAGGAGAGTTTATTCGGATTCCATGGGATGAGGATGAGGCCAAAACTTC
ACCTAGAATTAATCTAGCGTCATTTGAACATTTAGGAAGTGCCTTTTTAA
AGAGATTTAAAACCTCTAATTGCTCAAAGGTTAAAGGAGGAATCGTTCAA
GGTTCACAATTGTCTGTGTACTCTCATMCCATCCTTGATTACTCTTACCA
TAACTTTGGTGTAATCTTTCTTTCTGCCCACATATCATGCTGTAATTATC
CGTATGCAAGGGACCTGACATTAATTTGGAAAAATATACTCGGTTCTCTC
ATGGATTTTGTGGATGSTGCGGGGCAGGGTATATATGGTACAATCACTGA
TATGAAAGGTATTCTATCTTGTTCTCTGTCAAAATATTTATATAATATAT
GTAAATTTAATTAGGTACTCCTTTGGAATCTCCCATTGTTACTTTTAGAG
GGAGTCGCATCAAAGTCAACAAAGGATCCTTCATGCTGGTACTACCAGAA
GGCAACAATTACAAGGTCAATATTAAGCATGAGTCATACGATCCCAAATC
TTCAGAGTTTTCAATAATCTCACATCATTTAAATAAGAAAAATATAGTAA
TGGATTTAGTCGTTTCTACGGATCTTAAATATTACTCAAAGGACAGTGAC
CAATTAGTCTTTCTTCAAAATTTAACATCAAAATTCCCCGACTTTGCAMC
TCACTACCCAATAGGTTTAGACTCACATGGTAACCATATGCGTGTGCTGG
AGATATCAAATGACCTTAATAAATGTCAAGAAAAGCCAGGTCTAAAATTC
TTGGGAGGTCTTCGTTCCGATCCCGTCTCAACAGAGATGCTTCTTTTTCT
AGCAGACTTTATACTTACGCACAGGAATTTAGATGACGAAGTCGGAAGAG
TCTTTCAAAATTATTGTCTTCATTTTGTTTTTATAAGCTCAAATAATATG
TGGGGTTCCAATGAAAACTGCAACGTTAGCKCCCCCTTTTTGGATGAGGA
ATTTGCATCTTCATCCTCCTCTCCTGAAGCTCGCAATTTGATGGCCTGGA
TGCGTAAAAAGAAATTTGTTTTCTCACTTCATATTATGGGAAATACTGAA
GATATTTATCTTCCTAATTCAGCCGTTAATTTTGACTATGCAGAAAGGTA
GGTACCAATATTTGACAAAACTGTATTAGTTCATTGATTTCTTTTTATAT
AAAAAATCTAACAATGGATGATGTATTATTCCCTCTGTAATAATAATGAA
AAAATTTAATATTTTTACACATCAGAGTAAGATAAGGATTTTTAAGAGGT
AATTAACACTCAATTTAGGCGAAGAGCTCCTTCTACTTCGCATGACCAAT
AGTCAATATGTTGTGTGTTTGACAAAAAATAATATGTATATTCAATCAAG
GAATCCAAATGAAGATGATGTTTCTAAGTTTTAGTACTTAAAAATATATA
CATTCTTCTTATTGTTTGTTGTAAATCTTTAATTTAAAAAAAACTCTAGT
CCTTTTTAATAGCATCATTTAAGCGCTTTTATTAATAAAATAATCCATGT
TTCTTTTTTGCATGATGCCCATTAATTAATTAGTTACAAAATGTTAAATA
ATTATATTATGTTTGTGCATGATCAGTATTATCTAAGCCAAAATATGTAT
TATACCAGTGATTCCCAACTTTTATATCACTGCGAAGACCCTGGACGTAT
TGTTTTTTTTGGGCAGTTTATTTTGTGTGAATATTTGGGTTTATCTTTAT
ACTCTCGCGGAGTCCGGGTTGGGAATCACTGTATTGTACGTAGAGTAATA
TGATATTCACTTATCGTTTTAGCTACATTTATTTAACTATATATTATTTT
TTTAAAAAGGAGTCAACAGAGTTTTTATTGAATGCATGATGAATGTCGGA
GAAATTATTATTATAAATATAATTAATTATTCCTTTATCTCAAACTAAGT
TATTTCTTAAATGCTATTTTTGTTTTGTTTCCTAGGCTGACTGCGTCCCT
TTCCTCCCGCTACATCAACTCTCTCCAAAGTACCTCTCCAACTTGCACTC
AAAATCCATCAATCAAATACTCTCAAAGTTCATACTCCATGTCAAATATG
AATTGGAACGAGTTTGAAATTATAGAACTCGGCCTTGGGATATCCTGTTG
TCCATATCCAGAAGTAACCGAATTAACTCACATTTGGAGTCGACATCGCC
GCTCTCTCTTGAGTTTAATTTCTTCTGGACTTCAAGGGATTCATATTTCA
ATCCCACAGGAGGGATCTTCTGTTCAAATACAAGAGATTAGCTCAAATGA
CTTTCTTGTGGATAATGGAAACTTGTGGATCGCTCTGCCAGAGGGGKTAT
ATACTCTTTCTATTGATATTCCTGGACACATAACCACTAATAAAATAGTA
CGTGTCTATACTGGAGAATTCACTCATATTTTGAGCCCTCTTCCTCCTAC
GTCTGGTCTACCTAAAATGATAGTCCTCCTGATAATATTAGCTACTTTTG
CTGCCCTTTTATTTTTGGGACCTTTTTACTGTCATTGTCGGAGGGAAAGA
CGGAAGCGTCGAAGAAGAAACTACGATGGATTTACACCTCTTCATGGAAG
TAGTTGGAAAGGCGATTCCCGATACACTGATGAGGATGAGTTTGAAGATG
ACGTTGAGGAAGATGATATTGAGAGTCATCAAGCTACAAGTGACTTTAAT
TTAAAAACGACTTCATATCAGGATGACTTTGACGAAGATGATGAGACTGG
GNAACTTACTTCACTCTGGAACCAAAGTCAAATATTTGTCTTCCAAAAGC
CCTGTTGTAAACTTGATAGGAGGGTCTATCTATCGAAAGACGAAATGATT
AAGTCTTTCGAGATTGTTTCTTTATCCATTCTTTTTTTTTTTTAA back to top
|