EMLSAT00000005549, EMLSAT00000005549-701396 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005549
Unique NameEMLSAT00000005549-701396
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s297supercontigLSalAtl2s297:492854..495386 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005549 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005549EMLSAG00000005549-688315Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024237EMLSAE00000024237-733165Lepeophtheirus salmonisexon
EMLSAE00000024238EMLSAE00000024238-733166Lepeophtheirus salmonisexon
EMLSAE00000024239EMLSAE00000024239-733167Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778162auto778162Lepeophtheirus salmonispolypeptide
EMLSAP00000005549EMLSAP00000005549Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005549

>EMLSAP00000005549 ID=EMLSAP00000005549|Name=EMLSAP00000005549|organism=Lepeophtheirus salmonis|type=polypeptide|length=673bp
MRTTTFILLAICLSLSSSRRISRRQSSYGAPSGTILSGGSGSGISSAQSS
GSASFTSSSSSLGSSSLSASVVNEQQCSTVSEQQCSTVTDTVNEQQCSPV
NEQVCNTVTDTVNEQVCSTVNEQVCSTVNEQVCSTVNEQSCSTVNEQVCS
TVTDTVNEEQCSTVNEEQCSXVNKEECTTATEEQCETVTETVNEQQCSIV
KEQQCETVTNTVNEEVCNTVQDSKCQIQYMIKYEQQCSTVNQQQCQTVTA
QEXRQVCSNQSPRPSYGAPSYYRGSGGAGGGCSTQCRSVPKQECGVVPTQ
SCQNVPRRVEEEVCQSIPRQQCQSVPRQVQRQNCKSVPKQQCQTVPRQVQ
RESCKNIPKQLCRNVPTTNCQNIPRQVCNSVPRQVQRQECKSVPQQKCQT
VPQQKCQTVPQQNCQNVPKQQCQAVPKQVQRQDCNTVTRQQCQNVPRQVQ
RQDCKAVPKQQCQNVPKQECQNVPRQQCQNIPRQVQKQECKSLPKQSCQN
VPRQQCTAVPKQQCTNVPSQVCQNVPRQQCTSVPRQQCTSVPRQSCQNVQ
RVVCAGAGGAGADGAGAGSAGVSSAGGAGGAGVSSAGGAGLGSGASSGSF
SAGGNGVSGGSSFAGGSGVSGGSSFTGGSGISGGSSSSGGSGVSGGGSXA
SLSSYGSPVNGRSEASQQYYSRY
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mRNA from alignment at LSalAtl2s297:492854..495386-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005549-701396 ID=EMLSAT00000005549-701396|Name=EMLSAT00000005549|organism=Lepeophtheirus salmonis|type=mRNA|length=2533bp|location=Sequence derived from alignment at LSalAtl2s297:492854..495386- (Lepeophtheirus salmonis)
ATGAGAACCACAGTAAGATAGGAAGACTCCACAAAATCTAAATTATTAAT
CACCACATACTATTTTCATTTTCTTTTTTCAGACGTTTATTTTGTTGGCA
ATCTGTTTGTCACTCTCGTCATCTAGACGAATTTCGAGACGTCAATCCTC
TTATGGTGCTCCTAGCGGGACTATTCTATCAGGTGGAAGTGGATCAGGTA
TATCATCTGCTCAAAGTAGTGGTAGTGCTTCTTTCACAAGTTCTTCATCT
TCTTTAGGCTCATCTTCACTTAGTGCAAGCGTCGGTGGTGGAGCCGGAGG
YTTTGGTGCTGGTGGAGCCGGAGGYTTTGGTGCTGGTGGAGCAGGAGGNT
TTGGTGCTGGTGGAGCAGGAGGATTTGGTGCTGGCGGYGCCAGAGGYTCT
GGAGCTGGTGGGGCAGGYGGYTTTGGTGCTGGAGGTGCAGGAGCAGGTGC
TGGTGGAGCCGGATGCTCTACAACTGTTGAACAAGTTTGTTCTACTGTAA
ATGATCAACAATGCTCTACAGTTAATGAACAACAATGTTCCACAGTTAAT
GAACAACAATGTTCCACTGTTAATCAACAGCAGTGTTCCACAGTCAATGA
GCAACAATGTTCAACAGTCAATGAACAAGTGTGCAGTACAACAACAGAGG
AAGAGTGTAACACAGTTACAGAAACCGTGAATGAACAGCAATGTTCTACT
GTTAACGAACAACAATGTACCACAGTGAATGAGCAACAATGCTCTACAGT
TAGTGAACAGCAATGCTCTACAGTCACTGATACCGTCAATGAACAACAAT
GCTCACCTGTCAATGAACAAGTATGCAATACTGTTACAGATACAGTCAAC
GAACAAGTATGCTCTACTGTTAATGAACAAGTATGCTCAACAGTCAATGA
ACAAGTATGCTCAACAGTCAATGAACAATCTTGCTCAACAGTCAATGAAC
AGGTATGCTCCACTGTGACTGATACTGTGAATGAAGAGCAATGCTCTACT
GTCAACGAAGAGCAATGCTCTKCAGTCAATAAAGAAGAATGTACTACAGC
AACTGAAGAACAGTGTGAAACCGTCACGGAAACTGTCAATGAGCAACAAT
GTAGCATTGTCAAGGAACAACAATGTGAAACCGTTACAAACACTGTAAAT
GAAGAAGTATGTAACACTGTTCAAGATAGTAAATGCCAAATACAGTACAT
GATTAAGTATGAACAGCAATGTTCTACTGTGAATCAACAACAATGTCAGA
CGGTTACGGCTCAAGAGMGTAGACAAGTATGCTCCAATCAAAGCCCAAGA
CCATCCTATGGAGCTCCAAGTTACTACAGAGGATCAGGAGGAGCTGGAGG
CGGCTGCTCAACACAATGTAGAAGTGTTCCAAAACAAGAATGTGGTGTTG
TTCCCACACAATCCTGCCAAAATGTACCACGTCGTGTTGAAGAAGAAGTA
TGTCAAAGTATTCCTCGTCAACAATGCCAAAGTGTACCTCGCCAAGTTCA
AAGACAAAATTGCAAAAGTGTTCCAAAACAACAATGTCAAACCGTACCCC
GACAAGTTCAAAGGGAAAGTTGCAAAAATATTCCAAAACAATTGTGTCGA
AACGTCCCTACCACAAACTGTCAAAACATTCCACGTCAAGTCTGCAATAG
TGTTCCCAGACAGGTCCAGCGTCAAGAATGCAAGTCCGTCCCCCAACAAA
AATGTCAGACTGTTCCACAACAAAAATGTCAAACTGTTCCACAACAAAAC
TGTCAAAATGTCCCCAAACAACAATGTCAGGCCGTTCCAAAACAAGTGCA
AAGACAAGATTGTAATACTGTTACAAGACAGCAGTGCCAGAATGTTCCAC
GTCAAGTCCAAAGACAAGATTGTAAGGCTGTCCCAAAACAACAATGCCAG
AACGTTCCAAAACAAGAATGTCAGAACGTTCCCAGACAACAATGTCAAAA
CATCCCCCGTCAAGTCCAAAAGCAGGAATGTAAATCTCTACCTAAACAAT
CTTGTCAAAACGTGCCAAGACAACAATGTACTGCCGTTCCAAAACAACAA
TGTACCAATGTACCTAGCCAAGTTTGTCAAAATGTTCCTCGTCAACAATG
TACATCAGTTCCTCGTCAACAATGTACTTCTGTTCCACGTCAATCTTGTC
AAAACGTACAAAGAGTTGTTTGTGCTGGCGCAGGTGGTGCTGGCGCAGAT
GGGGCTGGTGCAGGTAGTGCTGGAGTAAGTAGCGCAGGTGGTGCCGGTGG
TGCTGGTGTAAGTAGTGCAGGTGGTGCTGGATTAGGAAGTGGGGCTTCCA
GTGGATCTTTCTCCGCTGGAGGAAATGGAGTTTCCGGTGGATCATCTTTC
GCTGGAGGAAGTGGAGTTTCTGGTGGATCATCTTTTACTGGAGGAAGTGG
AATTTCTGGTGGATCTTCTTCATCCGGAGGAAGTGGCGTATCTGGAGGAG
GAAGTAGMGCKTCTTTATCCAGCTATGGTTCTCCAGTTAATGGAAGATCC
GAAGCATCTCAACAATATTATTCTCGTTACTAA
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