EMLSAT00000005578, EMLSAT00000005578-701425 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005578
Unique NameEMLSAT00000005578-701425
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2supercontigLSalAtl2s2:1932686..1933237 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005578 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005578EMLSAG00000005578-688344Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024399EMLSAE00000024399-733327Lepeophtheirus salmonisexon
EMLSAE00000024400EMLSAE00000024400-733328Lepeophtheirus salmonisexon
EMLSAE00000024401EMLSAE00000024401-733329Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780906auto780906Lepeophtheirus salmonispolypeptide
EMLSAP00000005578EMLSAP00000005578Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005578

>EMLSAP00000005578 ID=EMLSAP00000005578|Name=EMLSAP00000005578|organism=Lepeophtheirus salmonis|type=polypeptide|length=141bp
VTGLDLLQVESLQKAFEVCGQNEETIDTELLVTSIKMLGVNVTKAGVMDA
VEESGLDPEAKFNLEQFCFIASRFINEEDVEEMREELKEAFRIYDREGNG
YITTGVLKEILKEIDPSLTAEQLEGIIQEVDEDGSGTVDFD
back to top

mRNA from alignment at LSalAtl2s2:1932686..1933237-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005578-701425 ID=EMLSAT00000005578-701425|Name=EMLSAT00000005578|organism=Lepeophtheirus salmonis|type=mRNA|length=552bp|location=Sequence derived from alignment at LSalAtl2s2:1932686..1933237- (Lepeophtheirus salmonis)
GTCACCGGACTGGATCTACTTCAGGTGGAAAGTATGTCGCAGGCTATTAT
TCGAAATAGCCTTACAAATTATATTTAATTATATATTCCATCAGGTCTGC
AAAAAGCATTCGAAGTCTGCGGTCAAAATGAGGAAACTATTGATACTGAA
CTCCTCGTAACCTCAATTAAAATGTTGGGAGTGAATGTAACCAAGGCAGG
TGTCATGGATGCTGTTGAAGAGAGTGGATTGGATCCTGAAGCAAAATTTA
ATCTGGAGCAATTTTGCTTTATTGCAAGTCGGTTTATTAATGAGGAGGAT
GTGGAAGAAATGAGAGAGGAACTCAAGGAAGCATTTCGTATCTATGACAG
AGAAGGTGGGAAAGGGATCTGATAAATGTTCCATGATGGGGTTGACTTGA
AATCTACTTTTAATTTTATAGGTAATGGATACATTACTACCGGTGTATTA
AAGGAAATCCTAAAAGAGATCGATCCTAGTTTGACGGCCGAGCAGTTGGA
AGGCATTATTCAAGAAGTGGATGAGGATGGATCTGGTACGGTGGACTTTG
AT
back to top
Add to Basket