EMLSAT00000005581, EMLSAT00000005581-701428 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005581
Unique NameEMLSAT00000005581-701428
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2supercontigLSalAtl2s2:2006749..2008009 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005581 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005581EMLSAG00000005581-688347Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024409EMLSAE00000024409-733337Lepeophtheirus salmonisexon
EMLSAE00000024410EMLSAE00000024410-733338Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780930auto780930Lepeophtheirus salmonispolypeptide
EMLSAP00000005581EMLSAP00000005581Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005581

>EMLSAP00000005581 ID=EMLSAP00000005581|Name=EMLSAP00000005581|organism=Lepeophtheirus salmonis|type=polypeptide|length=326bp
MKFVVVLLAFSVGVTFAAPEPLFFDLFKRGCDCRDYYTKKCVAAKQEKCS
EHYRKACKTIYKEHCEHETKQHCETTYKEECTYEDKQECXTHYVEECKPS
YNYGKKCTKVPKEXCHYKKVPKCHKVPQEHCKSYKVPKCQKYPEEVCKQV
PEKKCHYEEYYVPKKVSHEECAKEHSYYVEKYKTEYKEHCENYEVPHCKT
VYKKACTQETKQHCETTYKQQCEYEEKQQCHTVYHEECXPSYNYGKKCTK
VPSEKCEYIKVPKCHKVPQEHCSNYNVPKCHKVPEEVCKKEYKKKCEKYP
IQVPYKKEEKTCVWPEYRHHQDDNHC
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mRNA from alignment at LSalAtl2s2:2006749..2008009+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005581-701428 ID=EMLSAT00000005581-701428|Name=EMLSAT00000005581|organism=Lepeophtheirus salmonis|type=mRNA|length=1261bp|location=Sequence derived from alignment at LSalAtl2s2:2006749..2008009+ (Lepeophtheirus salmonis)
AAGCGTAAGGGGAAGACATACGCATGGCTTATGCTACTGCTGATGTTCCT
ACCATGGCACGGATTCAATGCATTTATCCCTTACGAAAACGTGTGTTAAA
AGCAACAAAAAAGCCGCGTTGCTTTATCATACTTAATATAAGTGTATGTT
GTGAAAATCATTTAGTCAAAGATTTTAATTCACTGACTTCAGTCCTAAAA
AAACACATTAACCAGCATGAAATTTGTGGTAAGCTCGATCAAGGATCAAT
GTACTGAAAAATTATATTATAGATTTCGTATATGTACTTTAGGTTGTGCT
CCTAGCATTTTCCGTTGGAGTCACGTTTGCAGCTCCAGAGCCTCTCTTTT
TCGATCTATTCAAAAGGGGGTGTGACTGCCGAGACTACTACACCAAAAAA
TGTGTTGCTGCAAAGCAGGAAAAATGTTCTGAGCATTATCGAAAAGCTTG
TAAGACCATTTACAAAGAGCATTGTGAGCACGAAACAAAGCAACACTGTG
AGACGACATATAAGGAGGAATGTACCTATGAGGATAAGCAGGAATGTNCC
ACTCACTATGTCGAGGAATGCAAACCTTCCTACAATTATGGAAAGAAGTG
TACCAAAGTCCCAAAGGAGAMCTGCCACTACAAAAAGGTTCCTAAATGCC
ACAAAGTACCTCAAGAGCATTGTAAAAGCTACAAAGTTCCCAAATGCCAA
AAGTACCCAGAGGAAGTATGTAAGCAAGTCCCAGAGAAAAAGTGTCATTA
TGAAGAATACTACGTTCCAAAGAAAGTGAGCCACGAAGAGTGTGCCAAGG
AACATAGCTACTATGTGGAAAAGTACAAGACGGAATACAAGGAGCATTGT
GAGAATTACGAAGTCCCTCACTGCAAAACCGTCTATAAGAAGGCTTGCAC
CCAGGAGACAAAGCAACACTGCGAAACCACGTACAAGCAACAATGCGAAT
ACGAGGAGAAGCAACAATGCCACACAGTCTATCACGAGGAATGTAAKCCC
TCTTACAACTATGGCAAAAAATGCACTAAAGTTCCATCCGAAAAGTGTGA
GTATATTAAAGTACCCAAGTGCCACAAAGTACCCCAAGAACATTGCTCCA
ACTACAACGTCCCCAAATGCCACAAAGTTCCTGAGGAGGTTTGCAAAAAA
GAGTATAAGAAGAAATGTGAGAAATATCCTATTCAAGTACCATACAAGAA
GGAGGAAAAGACCTGCGTCTGGCCAGAGTACAGACATCATCAAGATGACA
ATCACTGCTAA
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