EMLSAT00000005590, EMLSAT00000005590-701437 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005590
Unique NameEMLSAT00000005590-701437
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2supercontigLSalAtl2s2:241692..246291 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005590 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005590EMLSAG00000005590-688356Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024452EMLSAE00000024452-733380Lepeophtheirus salmonisexon
EMLSAE00000024453EMLSAE00000024453-733381Lepeophtheirus salmonisexon
EMLSAE00000024454EMLSAE00000024454-733382Lepeophtheirus salmonisexon
EMLSAE00000024455EMLSAE00000024455-733383Lepeophtheirus salmonisexon
EMLSAE00000024456EMLSAE00000024456-733384Lepeophtheirus salmonisexon
EMLSAE00000024457EMLSAE00000024457-733385Lepeophtheirus salmonisexon
EMLSAE00000024458EMLSAE00000024458-733386Lepeophtheirus salmonisexon
EMLSAE00000024459EMLSAE00000024459-733387Lepeophtheirus salmonisexon
EMLSAE00000024460EMLSAE00000024460-733388Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775140auto775140Lepeophtheirus salmonispolypeptide
EMLSAP00000005590EMLSAP00000005590Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005590

>EMLSAP00000005590 ID=EMLSAP00000005590|Name=EMLSAP00000005590|organism=Lepeophtheirus salmonis|type=polypeptide|length=398bp
MGEQGNPRENLKSLCKWQKHRTTVKDHHLSVFLTRRNLCNFELFQGNEST
CNTLGLAKTWSFCSETESCILNQDIGFNTIQTIAHEIAHTFGISHDEKEE
NNGSYYIMFPNIKTDVPSILRDFIWSQRSRSQFQKFLMTRSESQCLYTTT
PYDDDLISFLEYPYFLPGVSWSGDEQCGFAFNEYIGNSREIVRRCKLGKG
ICSELWCLFRGRCIRAPVMPLEGTICGYHRWCTRDSCQLMSQYDESEGQW
EQWSSWSVCSRDCRAGLSYSRRRCIPSKSGQFCKEGYEDTRHKLCNLHLN
NNCLSPDPNYECVKTVWPQRLSVKSSTHNQCLIYCHFLRIDSREEVEREE
DLHRTIPGYYIKKYLEYSKTFISSGRRDILFSGRGCRLYRWRLHTYRL
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mRNA from alignment at LSalAtl2s2:241692..246291+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005590-701437 ID=EMLSAT00000005590-701437|Name=EMLSAT00000005590|organism=Lepeophtheirus salmonis|type=mRNA|length=4600bp|location=Sequence derived from alignment at LSalAtl2s2:241692..246291+ (Lepeophtheirus salmonis)
TAATCAACCATTGATTATTTTTCAGGAAGGGTCATTTGGGTAAAAAACTT
GTTATATCCTTAGGTAAGGTATTTCTATCAAAAAACATTCATAGAATAAT
GGGAGAACAAGGAAATCCACGAGAAAATCTAAAGTCTCTATGTAAATGGC
AAAAACATCGAACCACTGTAAAAGATCATCACTTGAGTGTCTTTCTTACT
CGACGAAATCTTTGTAACTTTGAACTTTTTCAAGGGAACGAAAGTACCTG
CAATACTCTTGGACTAGGTATGTTTTTAACTAAATGATGAATATTTCAAA
TAATACATTCAAATGTAGCAAAAACATGGTCCTTCTGTAGTGAAACTGAG
TCTTGCATTCTAAATCAGGTATTTTAAATTCAAGGTATTAACCCTTTAAT
TTATTCTGAATTTTTGTAGGACATAGGATTTAATACTATACAGACTATAG
CTCATGAAATTGCTCATACTTTTGGAATATCACACGACGAAAAGGAGGAA
AATAATGGATCTTATTACATCATGTTCCCAAATATAAAGACAGATGTACC
TTCTATTTTAAGAGACTTTATATGGTCTCAAAGATCACGATCTCAATTTC
AAAAGTTCCTCATGACAAGATCAGAATCCCAGTGTCTATACACAACCACT
CCTTACGATGATGATCTGATATCATTTTTAGAGTATCCCTATTTTCTTCC
AGGAGTATCCTGGAGTGGGGACGAACAATGCGGATTTGCTTTTAATGAAT
ATATTGGAAATTCAAGGGAGATTGTTCGTCGATGCAAATTAGGAAAAGGT
ATTTGCTCAGAATTATGGTGTCTCTTCAGGGGTAGGTGCATTAGAGCTCC
AGTAATGCCATTGGAAGGAACTATTTGTGGCTATCACCGATGGTGCACTA
GAGATTCATGTCAACTCATGAGGTACCTATTATATTCAATCTAGCCCTCT
TTATAATAATTCGTTCATTGTTCTCATTAGCCAATATGATGAATCAGAAG
GTCAATGGGAGCAATGGTCATCATGGTCCGTATGCTCCCGGGATTGCCGT
GCAGGACTTTCATACTCCCGTCGAAGATGTATTCCATCCAAGTCTGGTCA
ATTTTGCAAGGAAGGTTATGAGGATACACGTCACAAACTATGTAACCTTC
ATCTCAATAATAATTGTCTCAGTCCAGATCCAAATTATGAATGCGTAAAA
ACTGTTTGGCCACAAAGACTTTCCGTCAAATCGAGTACTCATAATCAGTG
CCTTATATATTGCCATTTTCTTAGGATAGTAAGTTTAATACCAATTCATT
TAATTACATTAATTGTTTGGAGAAAAAAAATAAAGATATATGGTCCAAAT
TCAACTTGTGTTGAACTTTATCGTTTAATACTACCGATAATTAATTAATT
ATTAGTAATATATATTACTAATAACTAAACATTAATTAATTATTAGTAAT
TTATATTATTATTATTCATACACATGTCATTTAAATTTGGTTCTTCATTG
AAAGGATTCAAGAGAAGAAGTTGAGCGTGAAGAGGATCTCCATCGAACTA
TTCCAGGTTATTATATCAAAAAATATTTAGAATATTCTAAAACATTTATC
TCTAGTGGAAGAAGGGACATTTTGTTCAGTGGCAGAGGATGCCGTTTGTA
TAGATGGAGACTGCATACCTATCGACTGTAATGGAAATATTAATTCAAAT
GTAACAAAGGACAAATGTGGTGTATGTGGTGGAGATGGATCCAATTGCGC
CACAAAATATGACGAAAAAATCATTGACGATATTGAAGCTAGACTCACCC
TCGTCACTGAATTTTCAGACCAGGCATTTAATATCAAAATAAACATGCAT
CTACCTCATCAATTCAAACATGAACAAAGAGTCTACTTAGCTGCTGCTGC
AGAGCAAAATGGTAATCACTCCATAATGATTACTAAACAAAGTTTCCTTT
AATAAGCACAAATAATTCATATTTTAGGTTTCGTAAATATATTGCACATG
TACAACGATATTAGGTACTCAGGTTTGTATTTCATTCGGGACGAATACAC
TGGGAAAAATATCCAAATATCTTATAAGGATAGAGGTAAAGAAAAGTAGA
AATCCTTCAATAATAATAATTAACTTACTCCCAATCATAGATGACCAAAA
TTATATAAATTCTGCACTTAATATATCAAATGGATTTAAAAATAAAATAA
RCCGCCTATACGTTTTAAACCCATCCAATATTGTAGCAAAACGAGTCACT
CTTTCTTGGGACTACAATGTTCCCATGGAAGAAACACAAACTGAAATTGG
AAGAAGTTTACGTTTAGTAAATGAACCAAAGAGGAATGACATTTCGTATA
CGTGCAATCACATGGACTGTGGGACTTGGTGGGCTGGAGAGTGGCAAGAA
TGTGATCCAGAAACAAGTCAAGAAACTCGAAGTGTTTTTTGTTTGAATTC
GGAAAGGAGGCCACAGTCGAGAGATTTTTGTGATTTCAGAGTTCAACCTG
AAGAATTCAAAGCATGTCGTTCAGAAAAATTTATTTATTCACACTTGGGT
GAATAATTGTTTTAAAATTCTTAAATTCGATAAATATAAAGTATCATAAC
ATTTAATTTTAGAAACATCGAATTGGACTCCTGGAGAGTGGTCAAGTTGT
TCTGTCACATGTGGATATGGTTATTCAATAAGAGAATATGTCTGCTCAAG
AAGTAAGTTGCAGCTTCCTTAACAATCAAGGTAGAGCTAATAGTTAACCG
TTCAAAAATATTTCTAATTAATTTATAATTACAGTAGATGATTCTTGTGA
AAGGGCGTCAAGGCCATCTCCTGATCAACGAGAATGCATTTCAAAGATAT
GCGAACTTGAATGGTGGTATGGAAGTTGGGGTAGTTGCGAAAATGGTATT
CAAAGACGAAAAGTTTATTGCTTCGATGAAATACGGGATAGTGAAGAAGA
TTCAATTAAATGTTCATCAGAGAATAAGCCAAAGGACTACAAAGACTGTT
AGTTGATAATTAATAATAAATACAAATAATAAGTAAACATATAAATGATG
ATTTAATTACTTCCATTGTATCAAAGATAACTTTGTTTTATTGGTTATAG
ACTTTACCGTAGTAAATTAGTATTGGAATATGTTACTTCTAAGATGAACG
ATTTGGGAACGGTTTTTTATGTACGATTATAATTCATTCGTTATATAAGT
TCTTAACTTTAGTACTTATATGGATAACTAATTTTTTTTAATCTTGGGAT
GTGCGTGCAAATATATATATAGTTGATTTATCAGAATTGTAAAAATATGA
AATTCAAAAGGAGCTTTTTCAAGACGTAAAGGCAAAAATATATAAATTTA
TCTACAACGGAATTTAAATTACTTTGAGTAAAAATCAAATATTTATTTGG
AGGATGAAAAAGGTCAAACTATTTTAATGACTAGAAGGTGAAGATTCCTG
AAGGGATTACATCATATGGCTTAAGTTTTAGAGCTACTTGTTCGGACATT
TTTAAGCTAAATCTTCAATCAAAATAAAGAGTCATAAACTAGCTCAGATG
CAGATATTAAACGTTTTCAAAGTTATATTGGTTTCTTTTTACGTAAATAT
GTCCAGACAGTATCAATCCCTTCACCTATTTCTTGATCCGGAGTTAAATT
TGGGAGTGGAAAGCGACATGCAATAGTTTGACTATCTTTTTTACTTCCTT
AATTAATTTAAATTCGAGTTCCCCCATCTGAAAAAGTAATACGTTTGCCG
ATTATTCATATTTACATCATTTGATTAGATAGTCATTTCATACCATTTCC
TCAACACCAAATACAACTATATTGTCATACTGTCTTAAGTCTGCCTTCCA
AAGATCCCGTCGAATAAATGAAGCTTTACCTGGGAGAGATGACCCAATTG
CTAAGTTTTTAAATTTTGAATATAGAACCAACCATGGATTAAGCTCAATT
CCTGTTGCATTATATCCTAATTTAGCGCATTCAAAGACCTATGTAATAAA
ATAGAGTTTTTGCCTAATATCAAATATGTATTAAATCAAACACAATGGGC
CTACAATTCTTCCATCGCCAGAGCCAATATCTACAAGACTGGTTCCTTTT
CTACGATGTTGTAGAGCCTTGACCACGTTTTGAATTTGAGCATCGGTTGC
TGGAACATAAGGAAGACAAATCCTTCTGAGTGCAGGCGTAACAAAAGGAA
GACAAATACCACTCAATGCTATCGCTACTCCGCCTAATTATTCGGATAAA
GGATTTTATAATGTTGTAATTTAATTTGCATAATTATTAATTAAATATAT
AAAATATTTAACAAAATACCCGTAATTCCGGCAATTATAAGCCCCTTGGA
CCTGATAGATTTTCCTCCAGGGTTTTTCTCAAACTCTTTCTCAAGCGATA
AACATTCTGAACAATCAGTTTTCGTTTTTTCCTTGGTGATATCGTTCAAA
ACCTCTCGGCACTCCATTTCCAGCAGCAGAAAATTATATGTTAAGTTGTT
AGTTCAAGTTGTTTATATCGTTTTATTTATGTAGACGCAACCTCGTTATG
TAGAGGAACAGCTTGTTAGGGGTAGCGCCAAAGTACGCAATGCAATAGGC
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