EMLSAT00000005600, EMLSAT00000005600-701447 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005600
Unique NameEMLSAT00000005600-701447
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s2supercontigLSalAtl2s2:67232..70581 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005600 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005600EMLSAG00000005600-688366Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024519EMLSAE00000024519-733447Lepeophtheirus salmonisexon
EMLSAE00000024520EMLSAE00000024520-733448Lepeophtheirus salmonisexon
EMLSAE00000024521EMLSAE00000024521-733449Lepeophtheirus salmonisexon
EMLSAE00000024522EMLSAE00000024522-733450Lepeophtheirus salmonisexon
EMLSAE00000024523EMLSAE00000024523-733451Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771254auto771254Lepeophtheirus salmonispolypeptide
EMLSAP00000005600EMLSAP00000005600Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005600

>EMLSAP00000005600 ID=EMLSAP00000005600|Name=EMLSAP00000005600|organism=Lepeophtheirus salmonis|type=polypeptide|length=365bp
MTQPMSEPLSLDLFDTPMIEVSSTCSTPTITDNSLLFIPPQDVPSIYAKQ
KRSNSALESGMLTYKMTAIPRGYAMIININSYDNDVLEERKGSSKDVENL
SDLFEHLKFITKIVENPTRKEFMREVRSFAEDSDHEKIDMMALAVLSHGR
NGMIITHEGAKVDTEWIYSQFNNQKCPLLKGKPKFFIIQACRGDETDKAI
LQGQKNRLESFSPASRKRRPPTSVDTDTQYAGSSSYIEDLGRARPTWEDI
VIAYSTIPGYVSIRDRESGTWFIQSLCQTFFQHAHENNLIDLLMKTSEVL
SRYSNEKNEKQTCNIELRHMYKRLYFNADISVTSLPNQRIAGILNRSLST
PPASPAVHSNLIDED
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mRNA from alignment at LSalAtl2s2:67232..70581+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005600-701447 ID=EMLSAT00000005600-701447|Name=EMLSAT00000005600|organism=Lepeophtheirus salmonis|type=mRNA|length=3350bp|location=Sequence derived from alignment at LSalAtl2s2:67232..70581+ (Lepeophtheirus salmonis)
TAGCAGCAGCCGAAGAATAGTAGTAAAGCCCTCCACTCTCTTTTTTTACT
CTAATAACTATCATATTTAATTCATGTCTCTTGAGTCTTACATGAGACAT
TGATCAGTGATCACTGATCAGTTCATATTTTTCAATGTTAAGAGTGCGCT
GTTGCTCACCCGTTGTTTATTTGCTACAATATATTACATTATTTATAAAT
ATTATTAAATAATAAGTATTTTATTAGTCACAATAAAATACAATCTATTT
ATTTTCTGTGATTGTGAAAAAGTTAATTCATTAACCAAGTTGTATGGACA
ATAGCTCTTTGTGGTTATTAAAAGGAAAAAAGCTTTTGCAAGGGCTTTAT
GACGCAGAAAATAGGCCTAAAAAATAGGACTGAATTATAATATATTTTGT
ATAGTGTATCACTTTTTGAGAATTCATTGATTAGGAAACTACTAGAGTAG
TCATATTTTTCCGAATGGGTAAGTTGAATTATTAACTCTTTGTTATTCTA
ATTTTTTTAACAGACGTATGTACTTTGATCTACTAATGACTATTAATGTA
TTTAAATGTATAATCAATAATGTATTGATCCGAGTTAAGAAATCGAGGCC
ACGAAGTTATACCRAATKWTTGMTATTAATTAATCATTGTTATATTATAT
AAGCTAAAAAGTTATTTGATAGACTTTGTTAACCCTCATAAGCTTACACA
TTCTTATGTTTGAAAACACAAATACCATGTCAAGTGACTAACATTTTGTA
GTCATATTCATAACTATAATAATATTATATGTGTTTCATATGACTTAGCA
TTTCAAAAGTAAGACATTTTTCCATTCTTTGACAGCCTCAGAATACTTCA
ATTTCATAGATGCAATTTCTAACTCAGCAATGGTTGTCCAAAGGATATCC
ACGGTCAGATTAGTCCCATTACTTTCCCCCATTTACTAAGATAAGAAATT
CATCTTTGGGTTGGTTGATAATTTTTTGAAAACTGTGAAGTGCACAAAGT
AAAATATTTGCGTTCAATATTAATAGTTTTTAAAGAGTAATCAATAGAAC
GGGCTATTTTTCTTAAGTTTTTATTATAAATTACACAATGAAGGACAATA
AAATGCAGTCGCTTGACCAGAGGATGAAAAATTTCTACCTCTTTCAACTT
ATAAAATATACTTTTTGCACAGGTGTCTTCTAATTGACTACTATAATTAA
GAAGATGACMCAGCCAATGAGCGAGCCTTTGAGTTTGGACTTATTTGATA
CTCCAATGATAGGTACGTTACTTTAAATTATTATTTATTTTAATGCTATT
AATTTATCTAGGGAATTTCGTCATCTATTTTTAAATGATATTGATGATAT
ACCTGTATATACACATACTTTTATTAGCCTAAATGGGGAAAAAAATATGT
AGGCATTTTAAAATATTTATTTGAGAGGTAGCAGCTACATATAATTTTAT
AAGCGCACTCAAAACCTGTTGCAGGCGAAAATGGAACCTATTTTTCATTA
TTGCACCATTATTTTCCAGAAGTGTCTTCTACTTGTTCTACTCCAACGAT
TACAGACAACAGTCTTCTCTTTATTCCTCCTCAAGACGTGCCCAGCATTT
ATGCTAAGCAAAAACGTTCAAACTCTGCTCTGGAGAGTGGTATGCTGACC
TATAAAATGACGGCAATCCCACGGGGATATGCCATGATCATTAACATCAA
CTCATACGATAATGATGTTTTAGAGGAGCGCAAAGGATCATCTAAGGACG
TGGAAAATTTGTCTGATCTTTTTGAACATTTGAAGTTTATCACTAAGATT
GTTGAAAATCCTACTCGAAAGGAGTTCATGCGTGAAGTAAGGTCATTTGC
AGAAGATTCAGATCATGAAAAAATTGATATGATGGCATTAGCTGTTCTTT
CTCATGGGAGAAATGGAATGATTATAACTCATGAAGGAGCCAAGGTATAT
ATTACTTAAAGTCTATTATTATTTGAACAAAGTATACATGTCTAAAATTT
GATTATTTCGTTCCAGGTTGATACCGAGTGGATTTATTCACAGTTTAATA
ATCAAAAATGTCCCCTACTTAAAGGGAAACCCAAGTTTTTTATCATTCAA
GCTTGTAGGGGGGATGAAACCGACAAAGCTATTCTCCAGGGTCAAAAAAA
TAGATTGGAAAGTTTCTCACCAGCCAGTAGGAAAAGGAGGCCTCCTACAA
GTGTGGACACTGATACTCAATATGCAGGCTCATCTAGTTATATAGAAGAC
CTTGGTAGAGCACGCCCCACATGGGAAGATATAGTCATCGCTTATTCAAC
TATTCCGGGTAGGTTCTTTAATTAATTAATTATTTTTATAAGATTTAATT
GTTTATGTTTAAATTTTTAATTTAAATGTTTTATCTTTTAAAGGCTATGT
ATCTATTCGGGATAGAGAATCTGGAACATGGTTCATACAATCACTTTGCC
AAACATTCTTTCAACATGCTCACGAAAATAATTTGATTGATTTACTCATG
AAGACGTCAGAGGTCTTGAGTCGTTATTCGAACGAGAAAAATGAAAAACA
AACCTGCAATATTGAACTTCGACACATGTATAAACGCCTCTATTTCAATG
CTGATATTAGCGTTACCTCACTACCTAATCAAAGGATTGCAGGCATACTC
AATAGGAGCTTATCTACTCCTCCAGCTAGCCCAGCAGTTCACTCAAACCT
CATTGATGAAGACTGAATTTATGCATATTTTTGCATGAATGCAAGTATTT
GGCTTGGAATTGTTAATATTTGTTCATTGTCTTCCCTTATATTAATAAAA
CCCTAACTAATTACGTATGTATTAAAGATATCCCCTTCAATTCAAATATC
GAGACACCTCATCTGTTACCATTATTTTAGACTTTTATCCATGAGAACGA
ATTGGTTTTAGATTCCTCTTATGAATGGATAATAAGACAATTAATTTCAT
TTGCCTATTAATATAAAGCTCCCTCACCCTGGCGTAATATATCTCTTTCT
AAAAGTTTAGTAACTGCACCAAAAGTATTGAAATCCCACGTTCAAAAAAA
CTTTTTGAAGCAAGATTTTTAAAATAATCCAAAAGCCATTTATAAAAATA
AAGAAAGAAAACAGTCATCAATTCTTTTTTTTTTATGTGTAACTGGCCCT
ATTTTATGCAGTTTAGTTACCCTTGTTCTAAGTTTTGTAAATTTTTTTTT
TAGTATAATTTTGATAAAAGTATAGGCTCATTCTGATCAAATGTGTTTTA
TTATTTTATATAGATACTGAATTGTTTTTTTGTTTTTTTTAAAATAGAAA
TTCCATTGTCATTATTTTTATATGTCTTAAATAGATATTTATTTTGTATT
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