EMLSAT00000005683, EMLSAT00000005683-701530 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005683
Unique NameEMLSAT00000005683-701530
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s309supercontigLSalAtl2s309:135376..136618 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005683 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005683EMLSAG00000005683-688449Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024850EMLSAE00000024850-733778Lepeophtheirus salmonisexon
EMLSAE00000024851EMLSAE00000024851-733779Lepeophtheirus salmonisexon
EMLSAE00000024852EMLSAE00000024852-733780Lepeophtheirus salmonisexon
EMLSAE00000024853EMLSAE00000024853-733781Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773021auto773021Lepeophtheirus salmonispolypeptide
EMLSAP00000005683EMLSAP00000005683Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005683

>EMLSAP00000005683 ID=EMLSAP00000005683|Name=EMLSAP00000005683|organism=Lepeophtheirus salmonis|type=polypeptide|length=304bp
MCNGQKINYQLLSYTGMKTLFWNNILILLFFYLNTASKAQXLYTHSSVYP
KKHCPKGVYSGLLNDKEEPDGNGTYNCNRYHYSGQWARGKRNGQGLTQFS
NGDLHAGNYFMXMDKFHGYGDLNGKMEEDMWDREMTFPNGDKYIGDWVQG
VRTGHGFYTFKKSGNRYKGNYVKGRKTGFGIFWWTSGRYNGSKYVGEFIN
DRRHGGNETYYYSNGDVFIGAWKNGKQNGPGVLKFQNGNKMQGNWVKGNL
EGETFFIFPNGERYKGNFVGGSRNGDWIKTNSAPVDLQAFYSSKMKKNTL
RVIA
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mRNA from alignment at LSalAtl2s309:135376..136618-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005683-701530 ID=EMLSAT00000005683-701530|Name=EMLSAT00000005683|organism=Lepeophtheirus salmonis|type=mRNA|length=1243bp|location=Sequence derived from alignment at LSalAtl2s309:135376..136618- (Lepeophtheirus salmonis)
ATGTGTAATGGTCAAAAAATAGTAATTTTTTTAATGCGACAAGCAACAAG
CTAAAGAAAGCCACTTATTTGCAAATATACATCAAAGTCTTAAGCATATT
CAAGGTTAAATGACATATTTAGCAATAGACATACACTAATTGTAAATTGT
CTCTCCTTCACTCCGGATTCCAATTTATATTAATATTTCATTCAGAATTA
TCAATTATTATCATACACTGGAATGAAAACTCTATTTTGGAATAATATAC
TCATTCTACTATTCTTCTACTTGAATACTGCATCTAAGGCCCAASTTCTC
TATACTCATGTAAGTTGCAGAGAAACACAATTATATACGCATTTCATTTT
TGCACAAAATAATATATGACTTATAGTCCTCAGTTTATCCCAAAAAACAT
TGTCCCAAAGGGGTTTACTCTGGACTATTGAACGATAAGGAAGAACCTGA
TGGCAATGGAACCTATAATTGTAATAGATATCATTACTCTGGACAATGGG
CACGAGGAAAACGAAACGGGCAAGGATTAACACAGTTTTCAAATGGAGAT
CTTCATGCAGGAAATTATTTTATGGNTATGGACAAGTTCCATGGCTATGG
AGATTTGAATGGAAAAATGGAAGAAGATATGTGGGACAGTTTAGAGATGG
AAAAAGGGACGGAAGGGGTAAATGGCCTTAATTCTTAAGAGTCTTAGAAG
ATTTGTAACATTTTCTTTTCTCTAGGGGAAATGACATTCCCAAACGGAGA
TAAGTATATTGGAGATTGGGTTCAAGGGGTTCGTACAGGACATGGTTTTT
ATACGTTTAAAAAAAGTGGAAATCGATACAAGGGAAATTACGTTAAGGGA
CGTAAAACGGGGTTTGGAATATTTTGGTGGACTTCAGGTCGTTACAATGG
CTCTAAATATGTTGGAGAATTTATTAATGATAGGAGACATGGTGGTAATG
AAACGTACTACTATAGCAATGGTGATGTTTTTATCGGTGCATGGAAAAAT
GGAAAGCAGAATGGCCCAGGTGTTCTTAAATTTCAAAATGGAAACAAAAT
GCAAGGGAATTGGGTAAAAGGAAATTTGGAGGGAGAAACTTTCTTCATTT
TTCCAAATGGGGAGCGTTATAAAGGAAATTTTGTTGGGGGATCACGAAAT
GGAGATTGGATCAAAACTAATTCGGCACCTGTAGATCTCCAGGCTTTTTA
CTCATCTAAAATGAAAAAAAATACATTAAGAGTAATAGCTTAA
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