EMLSAT00000005710, EMLSAT00000005710-701557 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005710
Unique NameEMLSAT00000005710-701557
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s309supercontigLSalAtl2s309:471627..473962 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005710 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005710EMLSAG00000005710-688476Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024966EMLSAE00000024966-733894Lepeophtheirus salmonisexon
EMLSAE00000024967EMLSAE00000024967-733895Lepeophtheirus salmonisexon
EMLSAE00000024968EMLSAE00000024968-733896Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777975auto777975Lepeophtheirus salmonispolypeptide
EMLSAP00000005710EMLSAP00000005710Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005710

>EMLSAP00000005710 ID=EMLSAP00000005710|Name=EMLSAP00000005710|organism=Lepeophtheirus salmonis|type=polypeptide|length=399bp
MGQNQSWFIAFCPCNSAVHSYSFPYFLAPVSQYINSTSSXPTPLHSGENS
SSEWSGVLGTEMDLPPLCAGCRLRIVDDFYLTSVEKKWHASCLKCSECGG
ELEDQSSCFEREGHIYCKEDFLNCDVTLVKGDLFGMVNDLLFCKDHYDQV
EEEDDDEELEEDFGGCMGGGYSASYPPPSGPXDWGPPHSYDGSWYGGGPI
GDHPTYPGGTGHPATMIHSSASSPGGLIDNYPFDNNNKPNSSFKKRRGRX
KRPKMITGEGXTAEGGVYGPEGGNTPVGLAGLDPLGGGGMILGGGHGGGN
QPKTKRARTSFKHHQLRIMKAHFQINQNPDSRELKMLSQKTGLDKKVLQV
WFQNSRAKWRRTKTQDGVPPSGGEDHMGLGDASSPASDCSGNGPLIPCC
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mRNA from alignment at LSalAtl2s309:471627..473962-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005710-701557 ID=EMLSAT00000005710-701557|Name=EMLSAT00000005710|organism=Lepeophtheirus salmonis|type=mRNA|length=2336bp|location=Sequence derived from alignment at LSalAtl2s309:471627..473962- (Lepeophtheirus salmonis)
ATGGGACAAAATCAATCCTGGTTTATTGCTTTTTGTCCATGTAACTCTGC
CGTGCATTCATACTCATTTCCTTATTTTCTTGCTCCCGTCTCCCAGTACA
TCAATTCCACATCCTCCARCCCCACKCCCCTCCACTCTGGCGAGAACTCC
AGTTCCGAATGGAGTGGCGTTCTTGGCACTGAGATGGATTTGCCGCCTCT
CTGTGCGGGATGTCGCCTAAGGATCGTAGATGACTTTTACCTTACTTCTG
TGGAGAAGAAATGGCATGCGAGCTGTCTGAAGTGTTCAGAGTGCGGAGGA
GAGCTTGAGGATCAGTCATCCTGTTTCGAACGAGAGGGACATATTTATTG
CAAAGAGGATTTTCTAAAGTAAGAGATACCCCCCTACAACTTTTATTTAC
GTATTTATTTCGGCTTCAAAAACACACACAATAACAAATAACCACAAGTC
TTTGCGGATTGTCCTAAAATAGAGAACACCGCAATTACAAGCCTGGTAGC
TAAAAGCCCTTCTGTTCCTTTTTAGTGATGTGTACAAACTTATAAATGTG
AAATAAGTGGATGTTTTAAAAATTCTTTATTTAAAGCAATATTTCATCGG
AAGAAAAACCCGGGTTTTTTTTACTTTAAAATTGTATGAAATTACTTATG
CAAGACAAATCCTCATTAATTCGTCGAATTAGTCAAAAAATCAACAAAAT
TACATACATAAAAACATCACTAATTATATTTCGTTGTAAAAAAAAACCCT
GCTTTTTTCACTTTAAAACTGTACAAAATTGGATACAAGTATTATTTAAT
TTTGTCAAAAAAAAAATAAGAGAATGAAATCCTTAGAGATTTGAACTCTT
ATTTCTTAGAAAAAAAGAAAAAAAACTACAACCAAAAGACCATCACTAAA
AAGAATAAAAAACATACAATCTTACGGTTTTTGCAAAAAGAAAAAAGTTA
AAATTCACATGAAAACCGCAACAAAATAATGTTTCTATTTTTGTTATTTT
TTTACTGTGTGGTACATACTATCATTCAATAACACATATCCTGTCACGGA
TACAATGATCATTGATTCACGTATTCTAAACTTAGGAGCTCCAATCTCCA
ATCCTCTTTTGAGAGATTAAAATTCAATTTATTTAACTTATTTATAAAAA
TGAGATTAGGATTATCTATAAAATATGTATATTTTTAATAGTGATTAAAA
TGTTATTTTATTTTAATCACTATTCAATTATTTTAATTTTTAATTATTGT
ATATGTACATTTGAATAAATAACCCTTATTTGAATGTTGACTTTTTCAGA
ATGCAAAGTTGTATTCGAACCTGCTCAAAGTGCTCCCTGGACATCCGCCC
CTCAGATCTAGTNCATGAAAGCAAAAGACTTTTATTTCCACGTGGAATGC
TTTCGCTGTTCCAGTTGCGACGTCACGCTTGTCAAAGGAGATCTCTTTGG
CATGGTCAACGATCTTCTTTTCTGCAAGGATCACTACGATCAAGTCGAAG
AGGAAGATGATGATGAAGAACTAGAAGAGGACTTTGGAGGATGTATGGGT
GGAGGCTATTCAGCCTCATATCCACCTCCTTCCGGTCCCTMTGATTGGGG
NCCGCCACACTCCTACGATGGCTCTTGGTATGGTGGAGGGCCTATTGGAG
ATCATCCGACCTATCCAGGCGGCACTGGACATCCCGCTACCATGATTCAC
TCTTCTGCATCTTCTCCTGGCGGCCTTATTGATAACTATCCATTCGACAA
CAATAACAAGCCCAACAGCTCTTTCAAAAAGCGGCGGGGACGGRAGAAGC
GKCCTAAAATGATCACCGGCGAAGGAKTTACAGCAGAAGGCGGKGTATAT
GGCCCTGAGGGAGGAAATACTCCTGTGGGTCTTGCTGGATTAGATCCTCT
AGGAGGAGGAGGAATGATTCTGGGTGGAGGTCACGGAGGTGGAAATCAGC
CTAAAACGAAACGGGCGCGTACGAGTTTTAAGCATCACCAGCTTCGGATC
ATGAAGGCTCATTTTCAAATCAATCAAAACCCAGACTCTCGAGAATTGAA
AATGCTATCGCAAAAAACGGGGCTCGACAAAAAAGTGCTTCAGGTAAGAG
CTATTCCCTACAATTCCTTGCCCCATTTAATAAATAGTACGAATAAGCCA
TTTCAATACAACTCCTCATGCTTTCTTCCTTAGGTCTGGTTTCAGAATTC
ACGAGCCAAATGGAGGCGAACAAAGACGCAGGATGGAGTTCCCCCCTCGG
GAGGAGAGGATCACATGGGCTTGGGAGATGCTTCTTCTCCGGCCTCGGAC
TGCTCTGGAAACGGTCCTCTCATACCCTGTTGTTAG
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