EMLSAT00000005724, EMLSAT00000005724-701571 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005724
Unique NameEMLSAT00000005724-701571
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s309supercontigLSalAtl2s309:696420..699206 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005724 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005724EMLSAG00000005724-688490Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025030EMLSAE00000025030-733958Lepeophtheirus salmonisexon
EMLSAE00000025031EMLSAE00000025031-733959Lepeophtheirus salmonisexon
EMLSAE00000025032EMLSAE00000025032-733960Lepeophtheirus salmonisexon
EMLSAE00000025033EMLSAE00000025033-733961Lepeophtheirus salmonisexon
EMLSAE00000025034EMLSAE00000025034-733962Lepeophtheirus salmonisexon
EMLSAE00000025035EMLSAE00000025035-733963Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779381auto779381Lepeophtheirus salmonispolypeptide
EMLSAP00000005724EMLSAP00000005724Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005724

>EMLSAP00000005724 ID=EMLSAP00000005724|Name=EMLSAP00000005724|organism=Lepeophtheirus salmonis|type=polypeptide|length=700bp
MSIASSTETLSRIIKYDENLENNSFLKGFRDEFPDLFQKTIHEKWTIAIP
RQDSLPSELSLRPEDVSRHIFIPDEEGIPGKYCSLADKRLQINQKNQIKV
MDSEGNSELVRQILFSEXFYNDDLQKYNVLCLDAYLGEDPSFKTDGSIVS
DYKLSCVEDCIQYLFRHVDTDVIRKIEASCSNFDPDKSLVGDLIKSSFKK
LKQTSKNLISVITKTIVVKDWYTQFVLMKDFRYSNLLKKGEYEYLLAXLE
AAXEXLMHGIPTFTPSVDIQSENAKVLKMFSAVRSSDVQSVCQILYGGKD
SLPNETDSVDEAQHHPLCNSDPTIVDIKYRTPLHLASQFGHQNVILLILQ
CPSSRIILNSQDQNGHTPLHLSILYGHESSTKAILYFAEHQSYPLQIDLR
DKFGDTALHLGASYGYLSIVKLLLDYSANVQIRNKRNQTPIDVSMCSKIK
DLIQSYSSKLLVNYFNDKEEDYENPVEVEGSPQKFNTNIFKSKKEKFFKS
IIMGDLELTCHYLGVNHVNETFRSRVLYQSSCYPVCGGCEDCDNLLKGSS
SVKEILQRPGSPPMNVNATNDEGKTAVHXAAQLGXADIVQLLLSLGAEPF
SIAGDIGETPLHLACQNGHLGVVTVLTQNASQFRQNIDIKDKMGNTPLQY
ASMSGHYEIALKLLSFGASVKTKNFAGHSAVDVANYNNNKILSLLFKKYN
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mRNA from alignment at LSalAtl2s309:696420..699206-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005724-701571 ID=EMLSAT00000005724-701571|Name=EMLSAT00000005724|organism=Lepeophtheirus salmonis|type=mRNA|length=2787bp|location=Sequence derived from alignment at LSalAtl2s309:696420..699206- (Lepeophtheirus salmonis)
ATGTCTATAGCCTCTTCAACCGAGACGCTTTCTCGAATAATTAAATATGA
TGAAAATCTTGAAAATAATTCTTTTTTGAAAGGATTCAGAGACGAGTTCC
CGGATTTATTTCAAAAGACTATCCATGAAAAATGGACAATTGCAATTCCT
AGACAAGATTCTCTGCCTTCAGAATTGTCTCTAAGACCAGAGGATGTAAG
TCGACATATTTTTATTCCAGATGAAGAAGGCATTCCAGGAAAGTATTGTT
CCTTGGCTGATAAGCGTCTGCAGATCAATCAAAAGAATCAAATCAAGGTA
TATATTTAATAAACATTAAATTATAAATTAATATTACATTTTTAAAACCT
TTAAAATAGGTAATGGATTCTGAAGGAAACTCTGAGCTCGTACGGCAGAT
TTTATTCTCAGAGGMATTTTATAACGATGATCTCCAAAAATATAATGTAT
TATGCCTCGATGCCTACCTTGGTGAGGACCCAAGCTTTAAAACAGACGGC
TCTATCGTTAGTGATTATAAATTATCTTGCGTTGAAGACTGTATACAGTA
TTTATTCAGACATGTTGATACGGATGTTATCAGAAAAATTGAGGCGTCCT
GTTCAAATTTTGATCCCGATAAGAGCCTAGTTGGAGATTTAATTAAGTCA
TCCTTTAAAAAATTAAAGCAAACTTCCAAAGTATGTTCCCCTTCGCCTAT
GTTCAGCCTTTTGAACTATCATTTATATAATTATAATCACTCTTTAGTCT
GTCAATATCGACCTTTTGGAGTCCTCCTTGGAGACTTATATTTTGTATAA
CATCAGCACACCTCTTTCAAATAAGCTTAAAAATGATTGGATANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCCCATTGGACAAATTGGAGTGTCTTTATAGAGCTTT
ATATTTTTTTGAGAAATTACACACATCTGATGATTTGTTACAGAATCTCA
TCAGTGTAATTACAAAGACCATTGTTGTCAAAGATTGGTACACTCAATTC
GTTCTCATGAAGGACTTTCGATATTCTAATTTACTTAAAAAGGGTGAATA
TGAGTACTTATTGGCTTYATTAGAAGCGGCGKTGGAGKATTTAATGCATG
GAATCCCAACATTTACTCCATCCGTGGATATTCAAGTATATAATTAATTA
AATTAATTCTATTATCCAAGTTTGATTTTCCTCTTCCATTGTTGTAGTCA
GAAAATGCAAAAGTATTGAAAATGTTTTCTGCTGTACGCAGTTCTGATGT
ACAATCCGTTTGTCAAATTCTTTATGGAGGTAAAGATTCGTTACCGAATG
AAACAGACTCTGTGGATGAAGCTCAACATCATCCACTTTGTAATTGTGAG
TTTTGTTTGAAGAAAGATTATTATCCAAGTGTCAACTATCAAGAGAATCA
CTTTGGTTTCACACTTCTCCATGTTGCTTCAATGAATGGGGACTGCAAAA
TGGTTGACCTTTTTTAAATACATTTAAAGCGGATCCTACCATTGTTGATA
TTAAATATAGGTAGGTATTCATTCAATTATATAGATGTAATTATATAATA
ATTTACTTTTCCTTGAAATGAAGAACTCCTCTTCATTTAGCATCTCAATT
TGGCCATCAAAATGTAATTCTGCTGATACTGCAATGTCCTTCCTCTCGCA
TCATTCTTAACTCTCAAGATCAAAATGGACACACTCCACTTCATTTGTCC
ATTCTTTATGGACATGAATCCAGTACTAAAGCTATTTTATATTTTGCTGA
ACACCAGAGTTATCCCCTTCAAATTGATTTGAGGGACAAGTTCGGGGATA
CAGCTCTTCATCTCGGAGCTTCCTATGGATACTTGAGTATAGTTAAACTT
CTACTGGACTATTCAGCAAATGTTCAAATAAGGAATAAAAGAAATCAAAC
TCCGATTGACGTCTCAATGTGCTCGAAGATTAAGGATCTAATACAAAGCT
ATTCATCAAAACTTTTGGTTAATTACTTCAATGACAAAGAGGAGGACTAT
GAGAATCCTGTGGAAGTTGAAGGCTCTCCTCAAAAGTTTAATACTAATAT
TTTTAAATCCAAAAAGGAAAAATTCTTTAAATCTATCATCATGGGAGACC
TTGAATTAACCTGTCATTACCTTGGAGTTAATCATGTTAATGAAACATTC
AGATCTCGAGTTCTTTATCAAAGTAGCTGCTACCCCGTTTGTGGAGGCTG
TGAAGATTGTGATAATCTTTTGAAAGGATCTTCTAGTGTAAAAGAAATTC
TTCAACGCCCTGGATCACCTCCCATGAACGTGAATGCAACTAATGATGAA
GGAAAAACTGCAGTTCATGYCGCTGCCCAATTGGGTMAAGCCGACATTGT
GCAGCTTTTGCTCAGTTTAGGAGCTGAACCTTTTTCCATCGCTGGGGATA
TTGGAGAAACTCCTTTACATTTGGCATGTCAAAATGGTCATCTTGGAGTA
GTTACAGTACTTACACAAAATGCTAGTCAGTTTCGTCAAAACATAGATAT
AAAAGATAAAATGGGTAATACACCTCTCCAGTATGCTTCAATGTCAGGGC
ATTATGAGATTGCCCTTAAACTTCTGAGTTTTGGAGCATCTGTTAAAACA
AAAAACTTTGCTGGGCATTCGGCAGTAGATGTTGCAAATTACAATAATAA
TAAAATTTTGTCACTCTTGTTCAAGAAGTATAATTAG
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