EMLSAT00000005727, EMLSAT00000005727-701574 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005727
Unique NameEMLSAT00000005727-701574
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s309supercontigLSalAtl2s309:715420..717244 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005727 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005727EMLSAG00000005727-688493Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025045EMLSAE00000025045-733973Lepeophtheirus salmonisexon
EMLSAE00000025046EMLSAE00000025046-733974Lepeophtheirus salmonisexon
EMLSAE00000025047EMLSAE00000025047-733975Lepeophtheirus salmonisexon
EMLSAE00000025048EMLSAE00000025048-733976Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779444auto779444Lepeophtheirus salmonispolypeptide
EMLSAP00000005727EMLSAP00000005727Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005727

>EMLSAP00000005727 ID=EMLSAP00000005727|Name=EMLSAP00000005727|organism=Lepeophtheirus salmonis|type=polypeptide|length=232bp
MNILPLSFVVFLISIKEVTCQSLEEVSSLLSSNEKLVDENVEVFKEDFVE
FFYAPSRYFRYRNRYRRFYPQYYNIRNQFVKRPRKTGANSKYPICSYEDT
NFLGADINILNSLETDSAYECKFDCKATKNCKFWTFDEEARRGDNNCFLI
ESGTRRNNCKCLRRTDFIEVENEPDTDIGSDARRRRRRRRNRPKICPRGV
KESDDIDYTYDDYEEFNENLKKKSQNSTMSGA
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mRNA from alignment at LSalAtl2s309:715420..717244+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005727-701574 ID=EMLSAT00000005727-701574|Name=EMLSAT00000005727|organism=Lepeophtheirus salmonis|type=mRNA|length=1825bp|location=Sequence derived from alignment at LSalAtl2s309:715420..717244+ (Lepeophtheirus salmonis)
TCGATACACTCTTTTCAGTAAGCGAAGTATGCCTACATAATTTATTATCG TAATATGGTTTGATGTACATTTTTTTACTCATTACCACTGTTGACTTCGA GACGTTATGAACATTTTACCACTTAGTTTCGTTGTTTTTCTAATAAGTAT CAAAGAGGTCACATGTCAATCCTTGGAAGAAGTGAGTTCTCTATTGTCGA GCAATGAAAAGTTAGTGGATGAGAATGTAGAAGTCTTTAAGGAGGATTTC GTTGTGAGTACTGTTAATCAGTCCTTTTTTTTCTCTTAAAAAATCAATTG CATGCAATCATTATTACCTAGTTACTAGTTTATAACTAATTTATTCATCG TCTGAAAAAAATATGTTAATGTATAGCTACACTTTTAATCAAATATGATA TTAATTCAGTAGACTTAGTTAATTAATATCTACTATTAAATCTATCTCAC ATTTGTCATTGATGAACAACTTTCAGAAAAAAGAAAATGAGGAGTTTTTT TATGCTCCGTCAAGGTACTTTCGATATAGAAATCGTTATAGACGATTTTA TCCCCAATATTATAATATAAGAAATCAATTTGTGAAAAGACCTCGGAAAA CCGGAGCCAACTCTAAATACCCCATTTGCTCTTATGAAGATACTAATTTC CTTGGAGCAGATATAAATATATGTAAGTTCAATGGAAATCATCATTGGTT CATTTAATCAATGGACTTTTATTTTTTCTAGTAAACTCCTTAGAGACTGA CTCGGCGTACGAATGTAAATTTGATTGCAAAGCGACTAAAAATTGCAAAT TTTGGACTTTTGATGAAGAGGCCCGTCGAGGGGATAACAATTGCTTCCTG ATTGAATCAGGTAAGTCATAATTTGCAGAGGTGGGGATCTAGACTCGAGT TCATAATTTGAAGACTCGATTGTATATCCAATCCATGGATCGCAACTTGA ATAGGACTCGAAAGCTTAGACTTGATACTTCAATTGATTTTTTTTTTGCA ATCGTCACAATCATTTCTAAGAGGTATACAAAAAGTTTTGGCCGCATATT TGTGTCTAGGATTTTTTTTAAACTTTTTAATTACCTTTTTCCTGGACATT TCTTTTTTTGATGACATTGCGGAGCCCCAGTTGGGAATCACTGCTTTATG GTCTATATATCGGTATTGTTAATACTTAAAAAAAATTCCCTCAGGAAAAT TTTCACTGTCATTTTTTATTTTCCATGGGAAATAAAGTAATCTTTAAGGG GAAAGATTTAATTGGAGTAAGATTATTTTATACATGAAATATTCGAGAAC TAGGACTTGAGACTCGACTTGCAGAATTTTCCCACCTCGAAAAAAAATAA TTTGTGTCCTTCTAGATGTTATCCTTTTGAGGGGGGTAGGTGAAAGTCAT GTTAAACATCTTTAAAACTGAAACWTTTTTWTTTWTTTGMYGGGYGGGGG GYYGAGGCTAGATCCCCTGAATAGATTAATTTTAATATGCTAAGTTTATG ATCTGCTGCTTTTCTTTTATGCGTAATTTAGGTAAAGGCCGAACCCCAAA NCAATGTGTTCCTAGATAGGGATTACATTTCAGGGACAAGACGAAACAAT TGTAAGTGCTTGAGGAGAACAGATTTCATTGAAGTGGAGAATGAGCCTGA TACTGATATTGGATCTGATGCGAGGCGTAGACGACGTAGACGTCGAAACA GACCAAAAATTTGTCCTCGAGGTGTCAAAGAATCAGATGACATTGACTAT ACTTATGACGACTATGAAGAATTTAATGAAAATTTGAAGAAAAAATCTCA AAATTCAACCATGAGTGGTGCTTAG
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