EMLSAT00000005728, EMLSAT00000005728-701575 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005728
Unique NameEMLSAT00000005728-701575
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s309supercontigLSalAtl2s309:717547..718847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005728 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005728EMLSAG00000005728-688494Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000025049EMLSAE00000025049-733977Lepeophtheirus salmonisexon
EMLSAE00000025050EMLSAE00000025050-733978Lepeophtheirus salmonisexon
EMLSAE00000025051EMLSAE00000025051-733979Lepeophtheirus salmonisexon
EMLSAE00000025052EMLSAE00000025052-733980Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779455auto779455Lepeophtheirus salmonispolypeptide
EMLSAP00000005728EMLSAP00000005728Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005728

>EMLSAP00000005728 ID=EMLSAP00000005728|Name=EMLSAP00000005728|organism=Lepeophtheirus salmonis|type=polypeptide|length=374bp
MSVFKPKKDSGMDPPEFTIGGNVLKNRDALYRLIISQLFYDGYQQVALQL
SGIVGADPPCPPSERLHKVVSLGLEKERNAIXAXKVSAASNGLGGDLYGL
DLEFDTEMRXEAPEPALYETXYXXSHKAFCRAGAFSNDGQLCATGSADAS
IKVLDVDRMLAKSNNDIPVSKQSEGHPVIRTLYDHVDEVTCLEFHPKETI
LASGSKDNTIKLFDYSKASAKKACRTIIDAEPVQSLSFHPSGDFLLVGCE
HPVVRLYDVNTSQCFVSSIPHQRHTSEVTMVKFSNDGKIYASSSTDGSIK
IWDGVSSKVINTFDEAHDGAEVCSVYFTRNGKYILSSGKDSLIKLWELST
SRCLIAYTGAGATGRQVTSSSSCL
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mRNA from alignment at LSalAtl2s309:717547..718847-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005728-701575 ID=EMLSAT00000005728-701575|Name=EMLSAT00000005728|organism=Lepeophtheirus salmonis|type=mRNA|length=1301bp|location=Sequence derived from alignment at LSalAtl2s309:717547..718847- (Lepeophtheirus salmonis)
ATGTCCGTGTTCAAACCCAAGAAAGACTCCGGCATGGATCCTCCAGAGTT
TACAATAGGAGGGAACGTTCTTAAGAATCGTGACGCACTTTATAGACTTA
TTATATCCCAGCTGTTTTATGATGGCTATCAACAGGTAGCTCTTCAACTC
TCTGGAATAGTCGGAGCGGATCCTCCCTGTCCTCCCTCAGAGAGGCTTCA
CAAAGTCGTTTCTCTAGGATTAGAAAAAGAACGCAACGCCATASCTGCCA
KAAAGGTATCTGCCGCATCCAATGGATTGGGAGGGGATCTTTACGGCTTA
GATCTCGAGTTTGACACGGAAATGCGGAGMGAGGCTCCTGAGCCTGCGTT
ATATGAAACGGRTTATMTCANTAGCCATAAAGCTTTTTGTCGTGCTGGAG
CTTTTAGCAATGATGGACAATTGTGTGCTACTGGGTCTGCGGATGCGTCT
ATCAAGGTTCTAGATGTTGACAGAATGCTTGCCAAATCCAATAATGATAT
CCCCGTCTCCAAACAAAGTGAAGGACATCCCGTCATCCGAACTCTCTATG
ATCATGTTGACGAAGTCACTTGTTTAGAATTTCATCCAAAGGAGACTATT
CTCGCATCAGGCTCAAAGGATAACACTATCAAATTATTTGACTATAGCAA
AGCCTCCGCTAAAAAAGCATGCAGAACGATAATAGATGCAGAGCCTGTTC
AATCTCTCTCTTTTCATCCCTCTGGTAAATCCGTCGAAATTCATCTTCAA
GTGTTCATCTCAAAAGCAATTTATTTCATCTTTTAGGAGATTTTCTGTTA
GTTGGATGTGAGCATCCTGTTGTTCGTCTCTACGATGTCAATACAAGTCA
ATGCTTTGTTTCCTCTATTCCCCATCAAAGGCATACCTCAGAGGTTACTA
TGGTTAAATTTTCCAATGATGGAAAGGTATTTAATTTTTTACTTTCAGTG
AGATTATAGAATTATACGTATTCTCCTTAGATATATGCCTCTTCTTCGAC
AGATGGATCCATCAAGATTTGGGATGGTGTCTCAAGTAAAGTCATTAATA
CCTTTGATGAAGCTCATGACGGTGCCGAAGTATGCTCAGTTTACTTTACT
CGTAATGGTAAGTATATTCTCTCATCTGGAAAAGACTCTCTTATTAAACT
TTGGGAGCTATCAACGAGCAGATGTCTCATTGCTTATACTGGAGCAGGCG
CAACAGGGAGACAAGTAAGATCATAATTACGCATGCTATATTGATCAATG
TAATTTTACTCTTTTTTTTTTAAGGTAACATCGAGCTCAAGCTGTCTTTA
A
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