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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s309 | supercontig | LSalAtl2s309:749338..755791 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000005740 >EMLSAP00000005740 ID=EMLSAP00000005740|Name=EMLSAP00000005740|organism=Lepeophtheirus salmonis|type=polypeptide|length=614bp
MNRGFCDMSGWSEAKATNVFDQAHHVSRSKRGQVLGEGNGFRGCTIWFTG
LSGAGKTTIAFGLEKYLLSMGIPSYGLDGDNMRRGLNKDLGFTCQDREEN
IRRVAEVSKLFADAGVVSLASFVSPFNKDRQLARELHNESDLPFIEVFIN
TPLEECELRDTKGLYKKARAGLIKGFTGIDQDYEKPENPDLMIKTLGRSI
EECVYDVVEVLEKQQIIPKTESNPNRLKDLFIPVENKDSWLCEXKSFPKV
QLTKLDLQWVQVLSEGWSWPLKGFMRESEYIECLQFKCIHSHSVNQSVPI
VLPVQEKELYEAGKSVALIYEGQIKAVLKNIEIYEHRKEERIARTFGTSH
PDHPYIKMINSSGDWLIGGDLEVFERIRWNDGLDEYRLTPLELRNRFKSI
GADAIFAFQLRNPIHNGHALLMTDCKNQLRERGYKKPTLLLHPLGGWTKS
DDVPLHVRIQQHQAIMEDNILDPSDTVLAIFPSPMMYAGPTEVQWHAKAR
MNAGANFYIVGRDPAGMPHPGVPGTDLYEATHGGRILKAAPGLDQLEIIK
FRVAAYDTTLKSMAFFEPERKQDFLFISGTKMRAFARSGDDPPEGFMSPK
AWNILKEYYQNINN back to topmRNA from alignment at LSalAtl2s309:749338..755791+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000005740-701587 ID=EMLSAT00000005740-701587|Name=EMLSAT00000005740|organism=Lepeophtheirus salmonis|type=mRNA|length=6454bp|location=Sequence derived from alignment at LSalAtl2s309:749338..755791+ (Lepeophtheirus salmonis)
GTCCAATCATATTTTTCTAGGAGTTGCACCTGTGGCGGAAGGCAATATGA
TGTTTGATGGACCTGAAATAAGCGTGCGCTCATTCCAATGAGTAGATAAT
AGATAGTAAATTCGTATTTAGAAAATAGTTTTTTTTTCATGTAACAAGTA
TTAAATAGTTGTCTCCAGTGCAAAAAGGAAGATAGAAGAATGAATCGAGG
GTAAGAGGAGTAGTTATATTTCCCCCATAATCAACAATTTATTATGTACA
ATAAGTACACACTAGAGACATTTATAAATGTCTCACAAACTTTGATTTAT
ACATGGAATTATTCATGAATAATGAATACATAAATATATGTAATAATATA
TTTATGTATTTCTTATAGAAGAGTGTATTTGAAACACAGTTCAATGTTCA
GTTTTTAAGTACCTTCATTCATGATATAATGTAATAAATCATTGGGAACA
GTTGTGACACTTTTTGTGTTTGGCTCAATATCCCCAGGCTGGTTTAATTT
AGATTCACCAAATTCTAAAAAAACATTACTAAAAAATGATTTAAGTTGAT
TTAAATCTTACCTCAAAAAAGTCTGCTATTGTTTGAGTCTATTTAAACCG
GTGGTACCGACATTTCAAATTTACGAATAAATAAACGAATTAATCTACGG
ATTAATTCAATAAATATTATAACTATTAAAAGGGAGATTAAAGTCATAGG
AGCCCTCTCTGGTGCTAAGTGAGCAAACCCATGTTCAAAGGGCGTCCGCA
GGTTTATATTGTAGGAGATGGGGCTCTGTTATTGGGGGGAAAACATCCAA
GAATCCAAATTTTTGTAAAAAAAATTCTAAAATCCATAGTAATTCAGAAT
ATTTTTTTTAAAATAAAAAAACCCATGCTATTCACAAATTTTTTCAAAAC
CCCCTCTTATTCACAAAACATTTCAAAAATTAAATTTTTTGAGACAAAAT
TTCAAATATTAAATTTTTGGATTTTTAAATTTTTTAACAGTTGAGAAATA
AACTCTACAAAACTATTCACCAAGACTAACTCAAATATGACTYCTTCTCG
CGAAAATATATGGGAATGTCCCTAAGAAAATTGATCAAAACCCCGCTTTA
AAACAACCCCATAAAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTCCAAAAATTTCAAAAATCCATAGCTATTTAAAAA
AATTTAAATCAAATTATTAGGAAAAAAATTTCAAAAATCCACTGCTGCTC
ACAAAAAAATTAAAAAATTAAATATTTCTAATATTTTTTGATCAATAGAT
TTTCACAGAAAATTAAATTTTTTGTAAAAAAATCGAAAATTACATTTCAA
ATATTAAATTTTTTTGAATTTTCTTCCCAAAATATTATCTTTTTTTTCTG
CAGCATAATTTACCCAATTGACGAAAAAAAAATACATGTAAAAAGCAAAT
ATTCCTTAATTTGGTGGAGGTGGCTAAAATCCTTGCAGCCCACACCCTAT
GGACGCCCCTGCCCCCTCCTGTTGACTATTTCCTATACTTATTTTAAAAC
AAGCAATCAGGGAAATACTACTATTCTTAAAATATTTTATATATGTATAT
ACATTTTTTTGTATGAGTTACAGATTAATTATTTATTCGTGAAGTAACTA
TACAGTCCGTAAATTCTTCATCGGAGAAGGTCCAAACAAAACTGTTGATG
CTTTTAAGTAAAGAATAGCATCTCCTCTTTGACTTCCGCCCAGCAGCCTT
CACAACTCTTGACACGTTGTATTTTACAAAAATCGAACCACTAATTGAAA
AAAAAATCTGCCGGATACTTGGTTATAAATTTATTATTATATAAGGGAAT
AATTAAAAGGAGGAAAAACCCCGTCATTGACGTCACGAGGGATCGATTTT
ACCTTCTTTAAGGACCCACAAGTGGGACTGGACTAAGCCGCGGTCCTAAA
TAAGGACCTACTCAACACTAGTTGTATGTTTGTTTGAATGTCACCGGATT
AGCAAGTCTTGTCTTTGTATAAAATATATAAAACGGGTACATCCTAGTAT
TCTATATTATTAAAGTTTGTCTGTTCATTGCCGCCTAATAACTCCGGGTA
ATGCTGCATACTACCGCTAGTAAAATCATAAAGAAGAATAAATAATGCTA
GAAGAGTTGAAACACTTGTTGCTAATCTCCTCTATGCAGTAAGCGTTACA
TGCTTATTTCAAATTTTTCCTCACTAAGTGAATGTTTACTTTTAATAAAA
TTATATCAACTGATATCAAAATAATCAATAATCAGTGGCTTTTGCAGGAT
TATATTTTGGGGAGGGCTTGTGTTTTTCAATTTATAACCTTTTAATGATT
AAGTTTTAATATATTATAGCTGATAAGAAAATATTTTATAATATTTATAT
TATAAATCATCGATTAGAGTCATGGGTCGAAGAAATTCACTACCAAAAAA
CTCTTCTTCCCTTTTTTTGGGGGCAAACAGGATGCTTGATATGAAGTGTT
CATTATGTCTTCAGGTTTATGTTCATTATGAGTTTAAAATTTGCAAAATG
ACATTTCAAACATTAAATTTTTGCAAAAAAAAAGTTCAAATATTAAATTT
TTTGGAATTTAAAAAAAAAAAGTCATAGTTATCCACAAAAAATTTAATTT
TTTGGAAAAAAATTTGAAAAATTAAATTAAATTTGTTGAAGAAATTTTTT
GTTGAAAACTATAGCTAATCAGAAAAATATATNNNNNNNNNNNNNNNNNT
TATCTCAAATTAAATTTTTTTGGAGAAAAATCTAGACAAATTAAAGGTAG
ATTTTTTGGAAGCATCAATATATTTGTAAAAATGCTGCTAGTTTTTTCTT
GTTTTTCCAGTAAATTACATCATTTTAAGTATTGTTTATTTTGCTTCTAC
TTGTATTAATAGTTAACACTCACTCCTTTTGGAAAAAATTTAGATATTGT
AACACCAAGTGTAAATTTGTCATTTTGCACTTGGTGTTCCAATTTTCTTC
ACATTATTTTTCTTTGTTAATTTGTTTACATAATAAACGCTTCATATCAA
GTATCCTGTTTTCCGCAGAAAAAGGGATGAAGAGTTTTTTGGGAGTGAAT
TTCTTCAACCCATGACTCTAATCAATGATTTATAATATATTTTTTCCTCA
GCTATAATATATTAAAACTTAATAATTAAAAATCATGAAAAATCTAGATA
TTTATTCATCAAAAATATTATTTGTTCGAATTTCTAATTCAAATTTGAGA
TTTTCTAAACTGTTGCAAGCCGGGAAATTTGATGAGACGTATACAATTTT
CGGGAAAACGATTGAGTTGTATGATCTTAAAATATATTCAAACAATAGCA
GACATATTAAGTTTATATTTGTTTATATTTAGTGAGACTGAGTTCAACCA
ACACGGAGTAATTGAGCCAAAAATAAATAGTGTTGGAACTCTCATCTGTC
TCCCCTACTTAACAAAATGTGAAATGTGGTTGTATCCATAGAAATAAAAC
GCTTTTAATAAAATATGACATGTAGACAGTAGACTTAGTTATTCGAGTAT
ATGTATCGTGAGTTAATGTTTTGTCTGCTATTTTTTCACTATGGTGTTAT
CACACGTCACTTAAACAATGAGTGACGTCATATATAAACACATCCCTAGA
GCCGTATCGCAGCTTTGGCTTTTTCAGTATTATTTTAAATATTTAATATC
GAGTAAGTAGTAGTAGGATTTAATTAATTTATCTGAATATTATCTCATTA
ATCACTCTAGATTCTGTGATATGAGTGGATGGAGCGAAGCAAAGGCAACA
AATGTCTTTGATCAAGCTCATCATGTTTCGAGAAGTAAACGTGGACAAGT
GTTGGGTGAAGGAAATGGGTTCCGAGGTTGCACTATATGGTTTACTGGAT
TGTCTGGAGCTGGTAAAACGACAATAGCTTTTGGATTAGAGAAATATCTA
TTATCAATGGGTATTTGATTATAAAAAATTATTTACGTTTTTTGTAATGA
ACTATTTGATTCTAATGAATTAGGGATTCCATCCTATGGTTTAGATGGTG
ATAATATGAGGCGTGGATTGAACAAGGATCTGGGATTTACTTGTCAAGAT
AGAGAAGAAAATATACGACGAGTCGCCGAAGTTAGTAAGCTCTTTGCTGA
TGCTGGAGTTGTATCCCTTGCCTCTTTCGTATCCCCTTTCAATAAAGATC
GGCAATTGGCAAGAGAGCTGCACAACGAGTCAGATTTACCCTTTATTGAA
GTTTTTATTAACACTCCATTAGAGGAGTGTGAACTCCGAGACACAAAAGG
CCTCTATAAAAAAGCTAGAGCTGGTCTAATTAAAGGTTTTACTGGAATTG
ATCAGGACTACGAAAAACCTGAAAACCCAGATCTAATGATCAAAACACTT
GGTCGTAGTATTGAAGAGTGCGTCTATGACGTCGTCGAAGTTCTTGAGAA
GCAACAAATAATTCCCAAAACAGAGAGTAATCCAAATAGACTTAAAGATT
TATTCATTCCCGTGGAAAATAAAGACTCTTGGCTGTGTGAGMCTAAATCA
TTTCCTAAGGTTCAGCTCACAAAATTAGATCTTCAATGGGTTCAAGTGCT
ATCTGAGGGTTGGTCTTGGCCCTTAAAAGGATTCATGCGTGAATCAGAGT
ATATTGAATGTCTTCAGTTCAAATGTATTCACAGTCATAGTGTGAATCAG
TCCGTGCCAATTGTACTCCCTGTTCAAGAAAAGGAGCTCTATGAAGCTGG
GAAATCCGTCGCTCTTATCTATGAAGGTCAAATCAAGGCAGTTTTGAAAA
ACATTGAAATATATGAGCATCGGAAAGAAGAAAGAATCGCTCGTACATTT
GGTACATCTCATCCTGATCATCCATACATAAAAGTGGGATTATAATACCT
AATACTTGGATTAAAAATCTTAAGTCTGGTTAATTTTTTTATACATATTT
TATAGATGATAAACTCCTCAGGAGATTGGTTAATAGGTGGAGATTTGGAA
GTATTTGAACGTATTCGTTGGAATGATGGACTTGATGAATATAGACTCAC
TCCATTGGAGCTTAGGAATAGATTTAAATCTATTGGTGCGGATGCTATTT
TCGCTTTCCAACTACGAAATCCTATTCATAATGGACACGCTCTACTCATG
ACAGTACTTAATAATTAATTTGTGTTAAAGGGCTTTCCATTCTTGGGTGT
TTTACAGGATTGTAAGAATCAGTTGAGAGAAAGAGGTTATAAGAAACCGA
CTTTACTACTACATCCCTTAGGTGGCTGGACCAAGTCAGATGATGTKCCC
CTACATGTTAGAATTCAACAACATCAAGCCATTATGGAAGATAATATTTT
GGATCCCTCAGATACTGTTTTAGCAATATTCCCTTCACCTATGATGTACG
CAGGCCCCACAGAGGTCTGAGTTAAATTTTTCTTCTTCAAATGCTTTTAT
AATTAATTATCTTTAAAGGTTCAATGGCATGCCAAGGCAAGAATGAATGC
CGGAGCTAACTTTTACATCGTAGGAAGGGATCCTGCAGGTATGCCTCATC
CAGGAGTTCCTGGAACCGATCTATATGAAGCAACTCATGGGGGTAGAATT
CTTAAAGCTGCTCCTGGTTTAGATCAATTAGAAATAATTAAATTTCGTGT
TGCCGCATATGATACAACTCTTAAGTCTATGGCTTTTTTTGAACCAGAGC
GAAAACAAGATTTTCTATTTATTTCTGGAACTAAAATGCGTGCCTTTGCT
CGGTCGGGAGATGATCCACCAGAGGGATTTATGAGTCCTAAGGCATGGAA
CATTCTTAAAGAATACTATCAGAATATAAATAATTAAAAATTAATTATTA
TTATTTGAATATCACGTCTTAAACTTTTTGTTATTTGATCTTTTTATATA
ACTGCTTATTGCCTTTCATATCAGGATTTTTTATTTGTTATTTGCCGTTT
TAAATTCATCAATTTATTATATATTTATAATTTTTTATCTATATAGTGCA
CGACGTTTTAAGTTTTATTTTATATTATATTATGCATATATATATATATT
TCATACCTCTCTCGCTTGAAAAAATATGTGTGATCTTTCCTCTATCCAAA
TACATATTCCATAAAATTATTATTGATCATATTTTCGTAAAACAAATCTC
TTTTTCATTTTTAGTCCTCTAGATTTGGTTATGGATATATTAATATTGTT
ATATAAGATAATTTGTTTATAGTTGAGCCCGTAATGATTACGAATGCAAG
TCATGTGTATAATATACTTAATGTATGTAATTAAAAACGTTTATGAAGGA
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